BLASTX 7.6.2
Query= UN02658 /QuerySize=893
(892 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S... 292 3e-079
TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S... 48 7e-006
TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S... 48 7e-006
TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S... 48 7e-006
TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S... 48 7e-006
TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S... 48 7e-006
TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S... 48 7e-006
>TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S10,
chloroplast, putative | chr3:4220310-4221526 REVERSE
Length = 192
Score = 292 bits (746), Expect = 3e-079
Identities = 158/197 (80%), Positives = 170/197 (86%), Gaps = 9/197 (4%)
Frame = -2
Query: 777 MAVSSVASFLLPSFSNPTSSSSSTRQKVSLLSSLPTHS--CSVLVNKPSISSSFTTKRVF 604
MAVS+V+SFLLPSF P+SS SSTR KVSLL S TH S ++ KPS+S + +VF
Sbjct: 1 MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKPSVSLT----KVF 56
Query: 603 AAPETL--SPETLDEPSSEVSSSSSISVEAADKMAPKQKIRIKLRSYWVPLIEDSCKQIL 430
A P+TL +PE LDEP+SEV SSSSISV+ ADKMAPKQKIRIKLRSYWVPLIEDSCKQIL
Sbjct: 57 AVPDTLDPTPEILDEPASEVPSSSSISVD-ADKMAPKQKIRIKLRSYWVPLIEDSCKQIL 115
Query: 429 DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARLHFEIRTHQRMIDIPYPTAQTIDS 250
DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDAR HFEIRTHQRMIDI YPTAQTIDS
Sbjct: 116 DAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDS 175
Query: 249 LMQLDLPAGVDVEVKL* 199
LMQLDLPAGVDVEVKL*
Sbjct: 176 LMQLDLPAGVDVEVKL* 192
>TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 48 bits (113), Expect = 7e-006
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -2
Query: 495 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 319
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 318 HFEIRTHQRMIDIPYPTAQTIDSLMQLDLPAGVDVEVKL 202
FE+R H+R+ID+ + + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVIDL-FSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S20 (RPS20A) |
chr3:16471606-16472312 REVERSE
Length = 125
Score = 48 bits (113), Expect = 7e-006
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -2
Query: 495 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 319
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 318 HFEIRTHQRMIDIPYPTAQTIDSLMQLDLPAGVDVEVKL 202
FE+R H+R+ID+ + + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVIDL-FSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 48 bits (113), Expect = 7e-006
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -2
Query: 495 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 319
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 318 HFEIRTHQRMIDIPYPTAQTIDSLMQLDLPAGVDVEVKL 202
FE+R H+R+ID+ + + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVIDL-FSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 48 bits (113), Expect = 7e-006
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -2
Query: 495 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 319
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 318 HFEIRTHQRMIDIPYPTAQTIDSLMQLDLPAGVDVEVKL 202
FE+R H+R+ID+ + + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVIDL-FSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 48 bits (113), Expect = 7e-006
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -2
Query: 495 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 319
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 318 HFEIRTHQRMIDIPYPTAQTIDSLMQLDLPAGVDVEVKL 202
FE+R H+R+ID+ + + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVIDL-FSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 48 bits (113), Expect = 7e-006
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -2
Query: 495 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 319
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 318 HFEIRTHQRMIDIPYPTAQTIDSLMQLDLPAGVDVEVKL 202
FE+R H+R+ID+ + + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVIDL-FSSPDVVKQITSITIEPGVEVEVTI 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,019,842,285
Number of Sequences: 33410
Number of Extensions: 2019842285
Number of Successful Extensions: 69397210
Number of sequences better than 0.0: 0
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