BLASTX 7.6.2
Query= UN02708 /QuerySize=1034
(1033 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G13720.1 | Symbols: | LOCATED IN: chloroplast... 419 1e-117
TAIR9_protein||AT4G19390.1 | Symbols: | FUNCTIONS IN: molecular... 182 4e-046
>TAIR9_protein||AT5G13720.1 | Symbols: | LOCATED IN: chloroplast, chloroplast
inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised conserved protein UCP022348
(InterPro:IPR016804), Uncharacterised protein family UPF0114
(InterPro:IPR005134); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G19390.1); Has 294 Blast hits to 294 proteins
in 98 species: Archae - 18; Bacteria - 168; Metazoa - 0; Fungi - 0;
Plants - 53; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). |
chr5:4427960-4429029 FORWARD
Length = 263
Score = 419 bits (1077), Expect = 1e-117
Identities = 223/268 (83%), Positives = 238/268 (88%), Gaps = 8/268 (2%)
Frame = +2
Query: 125 ALYSLASATRLSVSLPNHHVVLPTRRRFHLPLAALASSSPESSSSTPSPISIPVVNGNTL 304
AL SL SAT LS+S+P ++VLPTRRRFHLPLA L SS PESS+S+ P SIP VNGNTL
Sbjct: 2 ALSSLISATPLSLSVP-RYLVLPTRRRFHLPLATLDSSPPESSASSSIPTSIP-VNGNTL 59
Query: 305 STSHGTHHDKVVVDDNSLFARFFRSTESTVERIIFDFRFLALLAVGGSLAGSLLCFLNGC 484
+S+GT D+S FA+FFRSTES VERIIFDFRFLALLAVGGSLAGSLLCFLNGC
Sbjct: 60 PSSYGTR------KDDSPFAQFFRSTESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGC 113
Query: 485 VYVMEAYKVYWTNCVKGIHKGQMVLHLVEAIDVYLVGTVMLIFSMGLYGLFISNSSPDVP 664
VY++EAYKVYWTNC KGIH GQMVL LVEAIDVYL GTVMLIFSMGLYGLFIS+S DVP
Sbjct: 114 VYIVEAYKVYWTNCSKGIHTGQMVLRLVEAIDVYLAGTVMLIFSMGLYGLFISHSPHDVP 173
Query: 665 AESDRALKASSLFGMFAMKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIAT 844
ESDRAL++SSLFGMFAMKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIAT
Sbjct: 174 PESDRALRSSSLFGMFAMKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIAT 233
Query: 845 GLDLLSYSVCIFLSSASLYILHNLHKGE 928
GLDLLSYSVCIFLSSASLYILHNLHKGE
Sbjct: 234 GLDLLSYSVCIFLSSASLYILHNLHKGE 261
>TAIR9_protein||AT4G19390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family
UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13720.1); Has 553 Blast hits to 553
proteins in 219 species: Archae - 18; Bacteria - 407; Metazoa - 0;
Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 74 (source:
NCBI BLink). | chr4:10574903-10576355 REVERSE
Length = 274
Score = 182 bits (461), Expect = 4e-046
Identities = 95/209 (45%), Positives = 137/209 (65%), Gaps = 10/209 (4%)
Frame = +2
Query: 305 STSHGTHHDKVVVDDNSLFARFFRSTESTVERIIFDFRFLALLAVGGSLAGSLLCFLNGC 484
STS T V +++ F + E +E++I+ RF+ L GSL GS+LCF+ GC
Sbjct: 75 STSASTSTSAAVTSNST---NRFEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGC 131
Query: 485 VYVMEAYKVYWTNCVKGIHKGQMVLHLVEAIDVYLVGTVMLIFSMGLYGLFISNSSPDVP 664
+YV++++ Y +++G+++ LVEAID+YL+GTVML+F +GLY LFISN
Sbjct: 132 MYVVDSFLQY------SVNRGKVIFLLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSES 185
Query: 665 AESDRALKASSLFGMFAMKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIAT 844
D SSLFGMF +KERP+W+++ S+ ELKTK+GHVIVM+LL+ +F++SK V I +
Sbjct: 186 RTHDIVSNRSSLFGMFTLKERPQWLEVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITS 245
Query: 845 GLDLLSYSVCIFLSSASLYILHNLHKGEH 931
DLL SV IF SSA L++L L+ G H
Sbjct: 246 VTDLLCISVSIFFSSACLFLLSRLN-GSH 273
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,064,195,100
Number of Sequences: 33410
Number of Extensions: 2064195100
Number of Successful Extensions: 69417967
Number of sequences better than 0.0: 0
|
