BLASTX 7.6.2
Query= UN02710 /QuerySize=943
(942 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabido... 307 2e-081
gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding pr... 305 1e-080
gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidop... 305 1e-080
gi|62321231|dbj|BAD94406.1| putative poly(A) binding protein [Ar... 222 9e-056
gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tab... 219 8e-055
gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nic... 214 2e-053
gi|7673357|gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nic... 212 9e-053
gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vini... 211 1e-052
gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Da... 200 5e-049
gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare ... 198 2e-048
gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis ... 172 1e-040
gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [A... 169 5e-040
gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Ara... 169 5e-040
gi|225438781|ref|XP_002283105.1| PREDICTED: hypothetical protein... 141 2e-031
gi|106879567|emb|CAJ38367.1| polyA-binding protein [Plantago major] 137 3e-030
gi|225458678|ref|XP_002284923.1| PREDICTED: hypothetical protein... 135 1e-029
gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japo... 132 7e-029
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata
subsp. lyrata]
Length = 655
Score = 307 bits (786), Expect = 2e-081
Identities = 158/196 (80%), Positives = 173/196 (88%), Gaps = 10/196 (5%)
Frame = +1
Query: 250 QPQMVPGMRPGYFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQVMAGGRGHRY 429
QPQ+VPG+RP +F PMMQPGQQGPRPGGRRSGDGPMRHQ QQPMPYMQPQ+M GRG+RY
Sbjct: 460 QPQLVPGLRPSFF-PMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYRY 518
Query: 430 -PRGRNMPDGPMPGGMVPFPYDINGVPI---MPAGALASSLAQASPAHQRTILGETLYPL 597
P GRNMPDGPM GGMVP YD+NG+PI M AG LA+SLA A+PA QRT+LGE+LYPL
Sbjct: 519 PPGGRNMPDGPMLGGMVPVAYDMNGMPIAQPMSAGQLATSLANATPAQQRTLLGESLYPL 578
Query: 598 VNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQP----GEG-K 762
V++IEHENAAKVTGMLLEMDQTEVLHL+ESPEALNAKVSEALDVLRNVNQP EG K
Sbjct: 579 VDQIEHENAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSTQVSEGNK 638
Query: 763 SGSPSDMMASLSINDH 810
SGSPSD+MASLSINDH
Sbjct: 639 SGSPSDLMASLSINDH 654
Score = 156 bits (392), Expect = 8e-036
Identities = 73/86 (84%), Positives = 78/86 (90%)
Frame = +2
Query: 2 SRVLNETNGKMVSGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGMGPRMPMFPGGAPG 181
SRVLNE NGKMV GKPLYVALAQRKEERRAKLQAQFSQMRPAFIPG+GPRMP+FPGGAPG
Sbjct: 377 SRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGVGPRMPIFPGGAPG 436
Query: 182 LGQPMFYGQGPPQMIPHQAGFGISPR 259
LGQ +FYGQG P +IPHQ GFG P+
Sbjct: 437 LGQQIFYGQGSPPIIPHQPGFGYQPQ 462
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein
[Arabidopsis thaliana]
Length = 662
Score = 305 bits (779), Expect = 1e-080
Identities = 155/198 (78%), Positives = 171/198 (86%), Gaps = 10/198 (5%)
Frame = +1
Query: 250 QPQMVPGMRPGYF-GPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQVMAGGRGHR 426
QPQ+VPGMRP +F GPMMQPGQQGPRPGGRRSGDGPMRHQ QQPMPYMQPQ+M GRG+R
Sbjct: 465 QPQLVPGMRPAFFGGPMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYR 524
Query: 427 YPR-GRNMPDGPMPGGMVPFPYDINGVPI---MPAGALASSLAQASPAHQRTILGETLYP 594
YP GRNMPDGPMPGGMVP YD+N +P M AG LA+SLA A+PA QRT+LGE+LYP
Sbjct: 525 YPSGGRNMPDGPMPGGMVPVAYDMNVMPYSQPMSAGQLATSLANATPAQQRTLLGESLYP 584
Query: 595 LVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPGE-----G 759
LV++IE E+AAKVTGMLLEMDQTEVLHL+ESPEALNAKVSEALDVLRNVNQP
Sbjct: 585 LVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSSQGSDGN 644
Query: 760 KSGSPSDMMASLSINDHL 813
KSGSPSD++ASLSINDHL
Sbjct: 645 KSGSPSDLLASLSINDHL 662
Score = 156 bits (392), Expect = 8e-036
Identities = 73/86 (84%), Positives = 78/86 (90%)
Frame = +2
Query: 2 SRVLNETNGKMVSGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGMGPRMPMFPGGAPG 181
SRVLNE NGKMV GKPLYVALAQRKEERRAKLQAQFSQMRPAFIPG+GPRMP+F GGAPG
Sbjct: 382 SRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGVGPRMPIFTGGAPG 441
Query: 182 LGQPMFYGQGPPQMIPHQAGFGISPR 259
LGQ +FYGQGPP +IPHQ GFG P+
Sbjct: 442 LGQQIFYGQGPPPIIPHQPGFGYQPQ 467
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 305 bits (779), Expect = 1e-080
Identities = 155/198 (78%), Positives = 171/198 (86%), Gaps = 10/198 (5%)
Frame = +1
Query: 250 QPQMVPGMRPGYF-GPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQVMAGGRGHR 426
QPQ+VPGMRP +F GPMMQPGQQGPRPGGRRSGDGPMRHQ QQPMPYMQPQ+M GRG+R
Sbjct: 465 QPQLVPGMRPAFFGGPMMQPGQQGPRPGGRRSGDGPMRHQHQQPMPYMQPQMMPRGRGYR 524
Query: 427 YPR-GRNMPDGPMPGGMVPFPYDINGVPI---MPAGALASSLAQASPAHQRTILGETLYP 594
YP GRNMPDGPMPGGMVP YD+N +P M AG LA+SLA A+PA QRT+LGE+LYP
Sbjct: 525 YPSGGRNMPDGPMPGGMVPVAYDMNVMPYSQPMSAGQLATSLANATPAQQRTLLGESLYP 584
Query: 595 LVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPGE-----G 759
LV++IE E+AAKVTGMLLEMDQTEVLHL+ESPEALNAKVSEALDVLRNVNQP
Sbjct: 585 LVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALDVLRNVNQPSSQGSEGN 644
Query: 760 KSGSPSDMMASLSINDHL 813
KSGSPSD++ASLSINDHL
Sbjct: 645 KSGSPSDLLASLSINDHL 662
Score = 156 bits (392), Expect = 8e-036
Identities = 73/86 (84%), Positives = 78/86 (90%)
Frame = +2
Query: 2 SRVLNETNGKMVSGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGMGPRMPMFPGGAPG 181
SRVLNE NGKMV GKPLYVALAQRKEERRAKLQAQFSQMRPAFIPG+GPRMP+F GGAPG
Sbjct: 382 SRVLNEMNGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGVGPRMPIFTGGAPG 441
Query: 182 LGQPMFYGQGPPQMIPHQAGFGISPR 259
LGQ +FYGQGPP +IPHQ GFG P+
Sbjct: 442 LGQQIFYGQGPPPIIPHQPGFGYQPQ 467
>gi|62321231|dbj|BAD94406.1| putative poly(A) binding protein [Arabidopsis
thaliana]
Length = 154
Score = 222 bits (564), Expect = 9e-056
Identities = 116/154 (75%), Positives = 130/154 (84%), Gaps = 9/154 (5%)
Frame = +1
Query: 379 MPYMQPQVMAGGRGHRYPR-GRNMPDGPMPGGMVPFPYDINGVPI---MPAGALASSLAQ 546
MPYMQPQ+M GRG+RYP GRNMPDGPMPGGMVP YD+N +P M AG LA+SLA
Sbjct: 1 MPYMQPQMMPRGRGYRYPSGGRNMPDGPMPGGMVPVAYDMNVMPYSQPMSAGQLATSLAN 60
Query: 547 ASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALD 726
A+PA QRT+LGE+LYPLV++IE E+AAKVTGMLLEMDQTEVLHL+ESPEALNAKVSEALD
Sbjct: 61 ATPAQQRTLLGESLYPLVDQIESEHAAKVTGMLLEMDQTEVLHLLESPEALNAKVSEALD 120
Query: 727 VLRNVNQPGE-----GKSGSPSDMMASLSINDHL 813
VLRNVNQP KSGSPSD++ASLSINDHL
Sbjct: 121 VLRNVNQPSSQGSEGNKSGSPSDLLASLSINDHL 154
>gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 219 bits (556), Expect = 8e-055
Identities = 120/202 (59%), Positives = 149/202 (73%), Gaps = 24/202 (11%)
Frame = +1
Query: 250 QPQMVPGMRPG------YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQVMAG 411
Q Q+VPGMRPG +F P++Q GQQG RPGGRR G GP++ Q QQPMP MQ Q++
Sbjct: 280 QQQLVPGMRPGGAPMPNFFMPLVQQGQQGQRPGGRR-GAGPVQ-QTQQPMPLMQQQMLPR 337
Query: 412 GRGHRYPRGRNMPDGPM---PGGMVPFPYDINGV--------PIMPAGALASSLAQASPA 558
GR +RYP GRN P+GPM PGGM+ PYD+ G+ MP LAS+LA A P
Sbjct: 338 GRMYRYPPGRNGPEGPMPGVPGGMLSVPYDMGGMLPRDSAMGQPMPISTLASALANAPPE 397
Query: 559 HQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRN 738
QRT+LGE+LYPLV+++EHE+AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA++VLRN
Sbjct: 398 QQRTMLGESLYPLVDQLEHEHAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRN 457
Query: 739 VNQPGEGKSGSPSDMMASLSIN 804
V Q + +P+D +ASLS+N
Sbjct: 458 VQQ-----TTNPADQLASLSLN 474
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana
tabacum]
Length = 649
Score = 214 bits (544), Expect = 2e-053
Identities = 115/198 (58%), Positives = 143/198 (72%), Gaps = 17/198 (8%)
Frame = +1
Query: 253 PQMVP--GMRPGYFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQVMAGGRGHR 426
P M P G P +F PM+Q GQQG RPGGRR G P++ Q QQP+P MQ Q+ GRG+R
Sbjct: 452 PGMRPGGGPMPNFFMPMVQQGQQGQRPGGRRGGAVPLQ-QGQQPVPLMQQQMFPRGRGYR 510
Query: 427 YPRGRNMPDGPMP---GGMVPFPYDINGVPI--------MPAGALASSLAQASPAHQRTI 573
YP GR +PD P GGM PYD+ G+P+ +P GALA++LA +SP QRT+
Sbjct: 511 YPPGRGLPDVAFPGVGGGMFSIPYDMGGMPVRDAGIVQPIPVGALATALANSSPTEQRTM 570
Query: 574 LGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPG 753
LGE LYPLV ++E E AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA++VLRNV+Q
Sbjct: 571 LGENLYPLVEQLEPETAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVSQQ- 629
Query: 754 EGKSGSPSDMMASLSIND 807
+S +P+D +ASLS+ND
Sbjct: 630 --QSSNPADQLASLSLND 645
>gi|7673357|gb|AAF66824.1|AF190656_1 poly(A)-binding protein [Nicotiana
tabacum]
Length = 330
Score = 212 bits (538), Expect = 9e-053
Identities = 114/198 (57%), Positives = 142/198 (71%), Gaps = 17/198 (8%)
Frame = +1
Query: 253 PQMVP--GMRPGYFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQVMAGGRGHR 426
P M P G P +F PM+Q GQQG RPG RR G P++ Q QQP+P MQ Q+ GRG+R
Sbjct: 133 PGMRPGGGPMPNFFMPMVQQGQQGQRPGSRRGGAVPLQ-QGQQPVPLMQQQMFPRGRGYR 191
Query: 427 YPRGRNMPDGPMP---GGMVPFPYDINGVPI--------MPAGALASSLAQASPAHQRTI 573
YP GR +PD P GGM PYD+ G+P+ +P GALA++LA +SP QRT+
Sbjct: 192 YPPGRGLPDVAFPGVGGGMFSIPYDMGGMPVRDAGIVQPIPVGALATALANSSPTEQRTM 251
Query: 574 LGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPG 753
LGE LYPLV ++E E AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA++VLRNV+Q
Sbjct: 252 LGENLYPLVEQLEPETAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVSQQ- 310
Query: 754 EGKSGSPSDMMASLSIND 807
+S +P+D +ASLS+ND
Sbjct: 311 --QSSNPADQLASLSLND 326
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 211 bits (537), Expect = 1e-052
Identities = 117/193 (60%), Positives = 145/193 (75%), Gaps = 20/193 (10%)
Frame = +1
Query: 250 QPQMVPGMRPG------YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQVM-A 408
Q Q+VPGMRPG +F P++Q GQQG RPGGRR G GP++ Q QQP+P MQ Q++
Sbjct: 438 QQQLVPGMRPGGAPMPNFFVPLVQQGQQGQRPGGRR-GAGPVQ-QNQQPVPLMQQQMLPR 495
Query: 409 GGRGHRYPRGRNMPDGPMPGGMVPFPYDINGVPIMPAGALASSLAQASPAHQRTILGETL 588
GGR +RYP GRNMPD PMP + P MP ALAS+LA A+P QRT+LGE+L
Sbjct: 496 GGRVYRYPPGRNMPDVPMPDAAIGQP--------MPISALASALANATPDQQRTMLGESL 547
Query: 589 YPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPGEGKSG 768
YPLV+++EHE AAKVTGMLLEMDQTEVLHL+ESPEAL +KV+EA+DVLRNV Q ++
Sbjct: 548 YPLVDQLEHEMAAKVTGMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQ---QAN 604
Query: 769 SPSDMMASLSIND 807
SP++ +ASLS+ND
Sbjct: 605 SPTEQLASLSLND 617
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 200 bits (506), Expect = 5e-049
Identities = 113/201 (56%), Positives = 142/201 (70%), Gaps = 25/201 (12%)
Frame = +1
Query: 250 QPQMVPGMRPG------YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQVMAG 411
Q Q+VPGMRPG +F PM+Q GQQG RPGGRR G GP + Q QQP+P M Q+M
Sbjct: 460 QQQLVPGMRPGGGPMPNFFMPMVQQGQQGQRPGGRR-GAGPAQ-QTQQPVPMMPQQLMPR 517
Query: 412 GRGHRYPRGRNMPDGPMP---GGMVPFPYDINGV--------PIMPAGALASSLAQASPA 558
GR +R+P GRN+ D MP GGM+P PY++ G+ MP ALAS+LA A
Sbjct: 518 GRMYRFPPGRNVGDVTMPGVGGGMLPVPYNMGGMLPREAAMGQPMPITALASALANAPAD 577
Query: 559 HQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRN 738
QRT+LGE LYPLV+++EH++AAKVTGMLLEMDQTEVLHL+ESP+AL AKV+EA+DVLRN
Sbjct: 578 QQRTMLGENLYPLVDQLEHDHAAKVTGMLLEMDQTEVLHLLESPDALKAKVAEAMDVLRN 637
Query: 739 VNQPGEGKSGSPSDMMASLSI 801
V+QP + +D + LS+
Sbjct: 638 VSQP------NVADQLGGLSL 652
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 746
Score = 198 bits (501), Expect = 2e-048
Identities = 117/215 (54%), Positives = 146/215 (67%), Gaps = 27/215 (12%)
Frame = +1
Query: 226 PSPGWIWNQPQMVPGMRPG-------YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMP 384
P PG+ + Q Q+VPGMRPG YF P++QPGQQGPRPG RRSG G + Q Q P P
Sbjct: 534 PQPGYGFQQ-QLVPGMRPGGGAHMPNYFVPVVQPGQQGPRPGMRRSGPGSAQGQ-QTPQP 591
Query: 385 YMQPQVMAGGRGHRYPRG-RNMPD-----GPMPGGMVPFPYDINGVPIM--------PAG 522
+ Q Q++ GR +RYP G R+M + G GGMV PYD+ P+ P G
Sbjct: 592 FQQ-QMVPRGRVYRYPPGPRHMAEVQQMPGVGVGGMVQ-PYDMGSFPVRDAGVSPAPPIG 649
Query: 523 ALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALN 702
L S+LA A+P QRTILGE+LYPLV K+EH+ AAKVTGMLLEMDQTEVLHL+ESPEAL
Sbjct: 650 TLTSALANATPEQQRTILGESLYPLVEKLEHQQAAKVTGMLLEMDQTEVLHLLESPEALK 709
Query: 703 AKVSEALDVLRNVNQPGEGKSGSPSDMMASLSIND 807
+KV+EA+DVLRNV Q + +P+ +A LS++D
Sbjct: 710 SKVAEAMDVLRNVAQ--QQNPNAPTSQLAGLSLSD 742
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 625
Score = 172 bits (434), Expect = 1e-040
Identities = 105/182 (57%), Positives = 125/182 (68%), Gaps = 18/182 (9%)
Frame = +1
Query: 226 PSPGWIWNQPQMVPGMRPG------YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPY 387
P PG+ + Q Q+VPGMRPG +F PM+Q QQ RPGG R G ++H PQQ P
Sbjct: 445 PQPGFGYQQ-QLVPGMRPGGGPGPNFFMPMVQ--QQQQRPGGGRR-PGGIQH-PQQQNPM 499
Query: 388 MQPQVMAGGRGHRYPRGRNMPDGPMPGGMVPFPYDINGVPIMPAGALASSLAQASPAHQR 567
MQ Q+ GR RYP+GR G VP PYD+ +P GALAS LA ASP QR
Sbjct: 500 MQQQMHPRGRMFRYPQGRG------GSGEVP-PYDMGNNMPLPIGALASHLANASPEQQR 552
Query: 568 TILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQ 747
T+LGE+LYPLV ++E E+AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA+DVLR+V
Sbjct: 553 TMLGESLYPLVEQLEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVAA 612
Query: 748 PG 753
G
Sbjct: 613 GG 614
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis
thaliana]
Length = 629
Score = 169 bits (428), Expect = 5e-040
Identities = 102/182 (56%), Positives = 122/182 (67%), Gaps = 18/182 (9%)
Frame = +1
Query: 226 PSPGWIWNQPQMVPGMRPG------YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPY 387
P PG+ + Q Q+VPGMRPG +F PM+QP QQ RPGG R G Q Q PM
Sbjct: 449 PQPGYGYQQ-QLVPGMRPGGGPVPSFFMPMVQPQQQ--RPGGGRRPGGIQHSQQQNPM-- 503
Query: 388 MQPQVMAGGRGHRYPRGRNMPDGPMPGGMVPFPYDINGVPIMPAGALASSLAQASPAHQR 567
MQ Q+ GR RYP+GR G VP PYD+ + GALAS+L+ A+P QR
Sbjct: 504 MQQQMHPRGRMFRYPQGRG------GSGDVP-PYDMGNNMPLTIGALASNLSNATPEQQR 556
Query: 568 TILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQ 747
T+LGE LYPLV ++E E+AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA+DVLR+V
Sbjct: 557 TMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVAA 616
Query: 748 PG 753
G
Sbjct: 617 GG 618
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis
thaliana]
Length = 613
Score = 169 bits (428), Expect = 5e-040
Identities = 102/182 (56%), Positives = 122/182 (67%), Gaps = 18/182 (9%)
Frame = +1
Query: 226 PSPGWIWNQPQMVPGMRPG------YFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPY 387
P PG+ + Q Q+VPGMRPG +F PM+QP QQ RPGG R G Q Q PM
Sbjct: 433 PQPGYGYQQ-QLVPGMRPGGGPVPSFFMPMVQPQQQ--RPGGGRRPGGIQHSQQQNPM-- 487
Query: 388 MQPQVMAGGRGHRYPRGRNMPDGPMPGGMVPFPYDINGVPIMPAGALASSLAQASPAHQR 567
MQ Q+ GR RYP+GR G VP PYD+ + GALAS+L+ A+P QR
Sbjct: 488 MQQQMHPRGRMFRYPQGRG------GSGDVP-PYDMGNNMPLTIGALASNLSNATPEQQR 540
Query: 568 TILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQ 747
T+LGE LYPLV ++E E+AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA+DVLR+V
Sbjct: 541 TMLGEVLYPLVEQVEAESAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMDVLRSVAA 600
Query: 748 PG 753
G
Sbjct: 601 GG 602
>gi|225438781|ref|XP_002283105.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 654
Score = 141 bits (355), Expect = 2e-031
Identities = 89/185 (48%), Positives = 115/185 (62%), Gaps = 8/185 (4%)
Frame = +1
Query: 262 VPGMRPGYFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQVMAGGRGHRYPRGR 441
VP ++PG P +PG + G + P+ QQ +P + GR
Sbjct: 471 VPMVQPGQ--PNQRPGGRRSGTGPVQQTQQPLPLMQQQMLPRGRVYRYPPGRNMADVPIP 528
Query: 442 NMPDGPM--PGGMVPFPY-DINGVPIMPAGALASSLAQASPAHQRTILGETLYPLVNKIE 612
+P G + P M P+ D MP GALA++LA A P QRT+LGE LYPLV+++E
Sbjct: 529 GVPGGMLSAPYDMAGMPFRDAAVSQPMPIGALATALANAPPDQQRTLLGENLYPLVDQLE 588
Query: 613 HENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPGEGKSGSPSDMMAS 792
HE AAKVTGMLLEMDQTEVLHL+ESPEAL AKV+EA++VLRNV Q ++ +P+D MAS
Sbjct: 589 HEMAAKVTGMLLEMDQTEVLHLLESPEALKAKVAEAMEVLRNVAQQ---QANNPTDRMAS 645
Query: 793 LSIND 807
LS+ND
Sbjct: 646 LSLND 650
>gi|106879567|emb|CAJ38367.1| polyA-binding protein [Plantago major]
Length = 314
Score = 137 bits (344), Expect = 3e-030
Identities = 71/110 (64%), Positives = 90/110 (81%), Gaps = 4/110 (3%)
Frame = +1
Query: 484 PYDINGVP-IMPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVTGMLLEMDQ 660
P D +P MP ALAS+LA A+P QRT+LGE LYPLV+++EHE+AAKVTGMLLEMDQ
Sbjct: 205 PRDAAAIPQPMPVTALASALANATPEQQRTMLGENLYPLVDQLEHEHAAKVTGMLLEMDQ 264
Query: 661 TEVLHLIESPEALNAKVSEALDVLRNVNQPGEGKSGSPSDMMASLSINDH 810
TEVLHL+ESP+AL +KV+EA++VLRNV Q G + SP+D +ASLS+ND+
Sbjct: 265 TEVLHLLESPDALKSKVNEAMEVLRNVQQQG---NNSPADQLASLSLNDN 311
>gi|225458678|ref|XP_002284923.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 640
Score = 135 bits (338), Expect = 1e-029
Identities = 74/117 (63%), Positives = 91/117 (77%), Gaps = 4/117 (3%)
Frame = +1
Query: 457 PMPGGMVPFPYDINGVPIMPAGALASSLAQASPAHQRTILGETLYPLVNKIEHENAAKVT 636
P G VP G P MP ALAS+LA A+P QRT+LGE+LYPLV+++EHE AAKVT
Sbjct: 524 PYDMGGVPLRDAAIGQP-MPISALASALANATPDQQRTMLGESLYPLVDQLEHEMAAKVT 582
Query: 637 GMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQPGEGKSGSPSDMMASLSIND 807
GMLLEMDQTEVLHL+ESPEAL +KV+EA+DVLRNV Q ++ SP++ +ASLS+ND
Sbjct: 583 GMLLEMDQTEVLHLLESPEALKSKVAEAMDVLRNVAQQ---QANSPTEQLASLSLND 636
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
Length = 660
Score = 132 bits (332), Expect = 7e-029
Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 16/199 (8%)
Frame = +1
Query: 226 PSPGWIWN--QPQMVPGMRPGYFGPMMQPGQQGPRPGGRRSGDGPMRHQPQQPMPYMQPQ 399
PS G I N P + G +P +P + GG + PM HQ P
Sbjct: 469 PSVGPIPNFVMPMVQQGQQP------QRPAGRRAGTGGIQQ-PMPMGHQQMLPRGSRGGY 521
Query: 400 VMAGGRG---HRYPRGRNMPDGPMPGGMVPFPYDINGVPIMPAGALASSLAQASPAHQRT 570
A GRG + + + P G +P D P +P GALAS+LA + P QR
Sbjct: 522 RYASGRGMPDNAFRGVGGLVPSPYEMGRMPLS-DAGAPPQVPIGALASALANSPPDQQRL 580
Query: 571 ILGETLYPLVNKIEHENAAKVTGMLLEMDQTEVLHLIESPEALNAKVSEALDVLRNVNQP 750
+LGE+LYPLV+++EH+ AAKVTGMLLEMDQTEVLHLIESP+AL AKV+EA++VLRN Q
Sbjct: 581 MLGESLYPLVDQLEHDQAAKVTGMLLEMDQTEVLHLIESPDALKAKVAEAMEVLRNAQQQ 640
Query: 751 GEGKSGSPSDMMASLSIND 807
++ +P+D +A+L+++D
Sbjct: 641 ---QANTPTDQLAALTLSD 656
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 359,848,489,672
Number of Sequences: 15229318
Number of Extensions: 359848489672
Number of Successful Extensions: 91916522
Number of sequences better than 0.0: 0
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