BLASTX 7.6.2
Query= UN02748 /QuerySize=1398
(1397 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P46228|RS1_SYNP6 30S ribosomal protein S1 OS=Synechococcus sp... 93 5e-018
sp|P50889|RS1_LEULA 40S ribosomal protein S1 OS=Leuconostoc lact... 91 1e-017
sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A OS=Synec... 91 2e-017
sp|Q89AJ3|RS1_BUCBP 30S ribosomal protein S1 OS=Buchnera aphidic... 87 3e-016
sp|P38494|RS1H_BACSU 30S ribosomal protein S1 homolog OS=Bacillu... 86 8e-016
sp|Q48082|RS1_HAEIN 30S ribosomal protein S1 OS=Haemophilus infl... 82 8e-015
sp|O06147|RS1_MYCTU 30S ribosomal protein S1 OS=Mycobacterium tu... 81 2e-014
sp|Q83E09|RS1_COXBU 30S ribosomal protein S1 OS=Coxiella burneti... 79 7e-014
sp|Q6GGT5|RS1_STAAR 30S ribosomal protein S1 OS=Staphylococcus a... 79 9e-014
sp|Q9Z8M3|RS1_CHLPN 30S ribosomal protein S1 OS=Chlamydia pneumo... 78 1e-013
sp|Q5HFU7|RS1_STAAC 30S ribosomal protein S1 OS=Staphylococcus a... 78 2e-013
sp|Q99U14|RS1_STAAM 30S ribosomal protein S1 OS=Staphylococcus a... 77 2e-013
sp|Q7A5J0|RS1_STAAN 30S ribosomal protein S1 OS=Staphylococcus a... 77 2e-013
sp|O84100|RS1_CHLTR 30S ribosomal protein S1 OS=Chlamydia tracho... 77 4e-013
sp|Q5HP69|RS1_STAEQ 30S ribosomal protein S1 OS=Staphylococcus e... 77 4e-013
sp|P38016|RS1_CHLMU 30S ribosomal protein S1 OS=Chlamydia murida... 76 5e-013
sp|Q49XT0|RS1_STAS1 30S ribosomal protein S1 OS=Staphylococcus s... 76 5e-013
sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium le... 75 8e-013
sp|Q8RI52|ISPH_FUSNN 4-hydroxy-3-methylbut-2-enyl diphosphate re... 75 1e-012
sp|Q97I09|ISPH_CLOAB 4-hydroxy-3-methylbut-2-enyl diphosphate re... 72 1e-011
>sp|P46228|RS1_SYNP6 30S ribosomal protein S1 OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=rpsA PE=1 SV=4
Length = 307
Score = 93 bits (229), Expect = 5e-018
Identities = 46/127 (36%), Positives = 78/127 (61%), Gaps = 6/127 (4%)
Frame = +3
Query: 474 SIHEIAKTLVGSVLPVKVVQADEENKKLILSEKLALWPKYSQNVNVGDIFTGRVGSVEDY 653
S + + LVG LP+K ++ DE+ +L+LS + AL + + VG++ G V ++ Y
Sbjct: 151 STRKAKEDLVGEELPLKFLEVDEDRNRLVLSHRRALVERKMNRLEVGEVVVGAVRGIKPY 210
Query: 654 GAFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSI 833
GAFI + ++GL+H+SE+S D+++ V DEV+V++ ++D E+ RI+LS
Sbjct: 211 GAFI------DIGGVSGLLHISEISHDHIETPHSVFNVNDEVKVMIIDLDAERGRISLST 264
Query: 834 KQLEDDP 854
KQLE +P
Sbjct: 265 KQLEPEP 271
>sp|P50889|RS1_LEULA 40S ribosomal protein S1 OS=Leuconostoc lactis GN=rps1 PE=2
SV=2
Length = 429
Score = 91 bits (225), Expect = 1e-017
Identities = 64/215 (29%), Positives = 108/215 (50%), Gaps = 22/215 (10%)
Frame = +3
Query: 345 GDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAKTLVGSVLPVK 524
GDT + +V GGL++ + + GF+P ++ ++ + ++ + +
Sbjct: 144 GDTVDAKVINAVRGGLIVDVNGVRGFVPASMVA--------ERFVSDL-NQFKNKDIKAQ 194
Query: 525 VVQADEENKKLILSEK-------LALWPKYSQNVNVGDIFTGRVGSVEDYGAFIHMRFDD 683
V++ D N +LILS K A + ++VG++ G V + D+GAF+ + D
Sbjct: 195 VIEIDPANARLILSRKAVAAQELAAQLAEVFSKLSVGEVVEGTVARLTDFGAFVDLGGVD 254
Query: 684 GLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDPLLE 863
GLVHVSE+S D V++ DVL GD+V V + +D EK RI+LSIK + P E
Sbjct: 255 ------GLVHVSEISHDRVKNPADVLTKGDKVDVKILALDTEKGRISLSIKATQRGPWDE 308
Query: 864 TLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
D++ G+ + G +E LPG+E ++
Sbjct: 309 AADQIAAGSVLEGTVKRVKDFGAFVEILPGIEGLV 343
>sp|P73530|RS1A_SYNY3 30S ribosomal protein S1 homolog A OS=Synechocystis sp.
(strain PCC 6803) GN=rps1A PE=3 SV=1
Length = 328
Score = 91 bits (224), Expect = 2e-017
Identities = 46/127 (36%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Frame = +3
Query: 474 SIHEIAKTLVGSVLPVKVVQADEENKKLILSEKLALWPKYSQNVNVGDIFTGRVGSVEDY 653
S E + LVG LP+K ++ DEE +L+LS + AL + + V + G V ++ Y
Sbjct: 150 SAREAKEDLVGEDLPLKFLEVDEERNRLVLSHRRALVERKMNGLEVAQVVVGSVRGIKPY 209
Query: 654 GAFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSI 833
GAFI + ++GL+H+SE+S D++ V DE++V++ ++D E+ RI+LS
Sbjct: 210 GAFI------DIGGVSGLLHISEISHDHIDTPHSVFNVNDEIKVMIIDLDAERGRISLST 263
Query: 834 KQLEDDP 854
KQLE +P
Sbjct: 264 KQLEPEP 270
>sp|Q89AJ3|RS1_BUCBP 30S ribosomal protein S1 OS=Buchnera aphidicola subsp.
Baizongia pistaciae (strain Bp) GN=rpsA PE=3 SV=2
Length = 566
Score = 87 bits (213), Expect = 3e-016
Identities = 61/225 (27%), Positives = 109/225 (48%), Gaps = 22/225 (9%)
Frame = +3
Query: 315 WKLAKAYCKSGDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAK 494
W + K T G + G GG + + FLP L R RE ++H
Sbjct: 95 WLTLEQAYKDSKTVVGLINGKVKGGFTVELEDIRAFLP-GSLVDIRPVRE---TMH---- 146
Query: 495 TLVGSVLPVKVVQADEENKKLILSEKLALWPKYSQNVNV-------GDIFTGRVGSVEDY 653
L G L KV++ D++ +++S + + +Y+ N+ G I +G V ++ DY
Sbjct: 147 -LEGKELEFKVIKLDQKRNNVVVSRRAVIESEYNAERNLLLETLQEGLIVSGIVKNLTDY 205
Query: 654 GAFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSI 833
GAF+ + DGL H+T +++W V+ +++ GDEV++ + D+EK R++L +
Sbjct: 206 GAFVDLGGVDGLLHIT------DMAWKRVKHPSEIVNIGDEVKIKILKFDREKIRVSLGL 259
Query: 834 KQLEDDPLLETLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
KQL DDP + ++ K G + ++ G +E G+E ++
Sbjct: 260 KQLSDDPWTKISERYPEKTKITGRVTNLTDYGCFVEIEEGVEGLV 304
>sp|P38494|RS1H_BACSU 30S ribosomal protein S1 homolog OS=Bacillus subtilis
GN=ypfD PE=1 SV=1
Length = 382
Score = 86 bits (210), Expect = 8e-016
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 28/278 (10%)
Frame = +3
Query: 156 LPSSSSSSSNKTSLLFVVKSFSGSVTANTDTSSDQSLLRDTSNDAGPSRMSTDWKLAKAY 335
+P S SS + VVK T D +L + DA + W+ +
Sbjct: 44 IPISELSSLHVEKASDVVKVDDELDLKVTKVEDDALILSKRAVDADRA-----WEDLEKK 98
Query: 336 CKSGDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAKTLVGSVL 515
++ + FE EV+ GGL++ + GF+P + + E G L
Sbjct: 99 FETKEVFEAEVKDVVKGGLVVDI-GVRGFIPASLV---------EAHFVEDFTDYKGKTL 148
Query: 516 PVKVVQADEENKKLILSEKLALWPKYS-------QNVNVGDIFTGRVGSVEDYGAFIHMR 674
+ VV+ D + ++ILS + + + + Q++ VG + G+V + D+GAF+ +
Sbjct: 149 SLLVVELDRDKNRVILSHRAVVESEQANKKQELLQSLEVGSVLDGKVQRLTDFGAFVDIG 208
Query: 675 FDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 854
D GLVH+S++S +V+ DV+ +G EV+V V ++D++ RI+LSIK P
Sbjct: 209 GID------GLVHISQLSHSHVEKPSDVVEEGQEVKVKVLSVDRDNERISLSIKDTLPGP 262
Query: 855 LLETLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
+ +KV D G+ + G +E LPG+E ++
Sbjct: 263 WNQIGEKVKPGDVLEGTVQRLVSFGAFVEILPGVEGLV 300
>sp|Q48082|RS1_HAEIN 30S ribosomal protein S1 OS=Haemophilus influenzae GN=rpsA
PE=3 SV=1
Length = 549
Score = 82 bits (201), Expect = 8e-015
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 23/224 (10%)
Frame = +3
Query: 318 KLAKAYCKSGDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAKT 497
+L KAY + T G + G GG + + + FLP L +R RE A
Sbjct: 97 ELEKAY-EEKATVIGLIXGKVKGGFTVELNGVRAFLP-GSLVDTRPARE--------ADH 146
Query: 498 LVGSVLPVKVVQADEENKKLILSEKLALWPKYSQ-------NVNVGDIFTGRVGSVEDYG 656
L+G L KV++ D++ +++S + + + SQ N+ G G V ++ +YG
Sbjct: 147 LLGKELEFKVIKLDQKRNNVVVSRRAVIESENSQEREQVLENLVEGSEVKGVVKNLTEYG 206
Query: 657 AFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIK 836
AF+ + DGL H+T +++W V+ +++ GDEV V V DK+++R++L +K
Sbjct: 207 AFVDLGGVDGLLHIT------DMAWKRVKHPSEIVNVGDEVTVKVLKFDKDRTRVSLGLK 260
Query: 837 QLEDDPLLETLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
QL DP + + G + ++ G +E L G+E ++
Sbjct: 261 QLGQDPWAAIAENHPVNSKLTGKVTNLTDYGCFVEILDGVEGLV 304
>sp|O06147|RS1_MYCTU 30S ribosomal protein S1 OS=Mycobacterium tuberculosis
GN=rpsA PE=3 SV=1
Length = 481
Score = 81 bits (198), Expect = 2e-014
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 23/187 (12%)
Frame = +3
Query: 315 WKLAKAYCKSGDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAK 494
W +A + + +G V GGL++ L GFLP L R R+ Q
Sbjct: 113 WGTIEALKEKDEAVKGTVIEVVKGGLILDI-GLRGFLP-ASLVEMRRVRDLQ-------- 162
Query: 495 TLVGSVLPVKVVQADEENKKLILSEKLALWPKYSQ-------NVNVGDIFTGRVGSVEDY 653
+G + K+++ D+ ++LS + L S+ N+ G I G V S+ ++
Sbjct: 163 PYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNNLQKGTIRKGVVSSIVNF 222
Query: 654 GAFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSI 833
GAF+ + D GLVHVSE+SW ++ +V++ GDEV V V ++D ++ R++LS+
Sbjct: 223 GAFVDLGGVD------GLVHVSELSWKHIDHPSEVVQVGDEVTVEVLDVDMDRERVSLSL 276
Query: 834 KQLEDDP 854
K ++DP
Sbjct: 277 KATQEDP 283
>sp|Q83E09|RS1_COXBU 30S ribosomal protein S1 OS=Coxiella burnetii GN=rpsA PE=1
SV=1
Length = 551
Score = 79 bits (193), Expect = 7e-014
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 31/212 (14%)
Frame = +3
Query: 264 LLRDTSNDAGPSRMSTD-------W-KLAKAYCKSGDTFEGEVEGFNGGGLLIRFHSLVG 419
++ + N G +R+S + W +L KAY K+G+ +G + GG + +S+
Sbjct: 67 VIEASDNGFGETRLSREKARRAKAWSELEKAY-KAGEMVKGVIIERVKGGFTVDLNSVRA 125
Query: 420 FLPYPQLSPSRSCREPQKSIHEIAKTLVGSVLPVKVVQADEENKKLILSEKLALWPKYS- 596
FLP L + R+P L + K+++ D+ +++S + + + S
Sbjct: 126 FLP-GSLVDVKPVRDP--------GYLEDKEIDFKIIKMDQRRNNVVVSRRAVMEAETSA 176
Query: 597 ------QNVNVGDIFTGRVGSVEDYGAFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDV 758
+ + G G + ++ DYGAF+ + DGL H+T +++W V+ D+
Sbjct: 177 ERQARLEELQEGQEIKGVIKNITDYGAFVDLGGVDGLLHIT------DMAWGRVKHPSDL 230
Query: 759 LRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 854
L GDEV V V D++K R++L +KQL DDP
Sbjct: 231 LNVGDEVHVKVLKFDRDKKRVSLGMKQLADDP 262
>sp|Q6GGT5|RS1_STAAR 30S ribosomal protein S1 OS=Staphylococcus aureus (strain
MRSA252) GN=rpsA PE=3 SV=1
Length = 391
Score = 79 bits (192), Expect = 9e-014
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Frame = +3
Query: 504 GSVLPVKVVQADEENKKLILSEKL-------ALWPKYSQNVNVGDIFTGRVGSVEDYGAF 662
G + +KV + D EN ++ILS K A + Q++N GD+ G+V + +GAF
Sbjct: 151 GQTIRIKVEELDPENNRVILSRKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAF 210
Query: 663 IHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQL 842
I + D GLVHVSE+S ++VQ +V+ G +V+V + +ID++ RI+LSIK
Sbjct: 211 IDIGGVD------GLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDT 264
Query: 843 EDDPLLETLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
P + D G +N G +E PG++ ++
Sbjct: 265 LPTPFENIKGQFHENDDIEGVVVRLANFGAFVEIAPGVQGLV 306
>sp|Q9Z8M3|RS1_CHLPN 30S ribosomal protein S1 OS=Chlamydia pneumoniae GN=rpsA
PE=3 SV=1
Length = 580
Score = 78 bits (191), Expect = 1e-013
Identities = 46/187 (24%), Positives = 98/187 (52%), Gaps = 23/187 (12%)
Frame = +3
Query: 315 WKLAKAYCKSGDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAK 494
W+ A+C+ G +G++ GGL++ + FLP Q+ K I +
Sbjct: 124 WEYILAHCEEGSIVKGQITRKVKGGLIVDI-GMEAFLPGSQID--------NKKIKNL-D 173
Query: 495 TLVGSVLPVKVVQADEENKKLILS-------EKLALWPKYSQNVNVGDIFTGRVGSVEDY 653
VG V K+++ + E + +++S E+++ + + +++G+ G V ++ D+
Sbjct: 174 DYVGKVCEFKILKINVERRNIVVSRRELLEAERISKKAELIEQISIGEYRKGVVKNITDF 233
Query: 654 GAFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSI 833
G F+ + DG + GL+H+++++W ++ +++ E+ VI+ ++DKEK R+ L +
Sbjct: 234 GVFLDL---DG---IDGLLHITDMTWKRIRHPSEMVELNQELEVIILSVDKEKGRVALGL 287
Query: 834 KQLEDDP 854
KQ E +P
Sbjct: 288 KQKEHNP 294
>sp|Q5HFU7|RS1_STAAC 30S ribosomal protein S1 OS=Staphylococcus aureus (strain
COL) GN=rpsA PE=3 SV=1
Length = 391
Score = 78 bits (190), Expect = 2e-013
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Frame = +3
Query: 504 GSVLPVKVVQADEENKKLILSEKL-------ALWPKYSQNVNVGDIFTGRVGSVEDYGAF 662
G + +KV + D EN ++ILS K A + Q++N GD+ G+V + +GAF
Sbjct: 151 GQTIRIKVEELDPENNRVILSRKAVEQEENDAKKDQLLQSLNEGDVIDGKVARLTQFGAF 210
Query: 663 IHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQL 842
I + D GLVHVSE+S ++VQ +V+ G +V+V + +ID++ RI+LSIK
Sbjct: 211 IDIGGVD------GLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDT 264
Query: 843 EDDPLLETLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
P + D G +N G +E PG++ ++
Sbjct: 265 LPTPFENIKGQFHENDVIEGVVVRLANFGAFVEIAPGVQGLV 306
>sp|Q99U14|RS1_STAAM 30S ribosomal protein S1 OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=rpsA PE=1 SV=1
Length = 391
Score = 77 bits (189), Expect = 2e-013
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Frame = +3
Query: 504 GSVLPVKVVQADEENKKLILSEKL-------ALWPKYSQNVNVGDIFTGRVGSVEDYGAF 662
G + +KV + D EN ++ILS K A + Q++N GD+ G+V + +GAF
Sbjct: 151 GQTIRIKVEELDPENNRVILSRKAVEQEENDAKKDQLLQSLNEGDVIHGKVARLTQFGAF 210
Query: 663 IHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQL 842
I + D GLVHVSE+S ++VQ +V+ G +V+V + +ID++ RI+LSIK
Sbjct: 211 IDIGGVD------GLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDT 264
Query: 843 EDDPLLETLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
P + D G +N G +E PG++ ++
Sbjct: 265 LPTPFENIKGQFHENDVIEGVVVRLANFGAFVEIAPGVQGLV 306
>sp|Q7A5J0|RS1_STAAN 30S ribosomal protein S1 OS=Staphylococcus aureus (strain
N315) GN=rpsA PE=1 SV=1
Length = 391
Score = 77 bits (189), Expect = 2e-013
Identities = 52/162 (32%), Positives = 84/162 (51%), Gaps = 13/162 (8%)
Frame = +3
Query: 504 GSVLPVKVVQADEENKKLILSEKL-------ALWPKYSQNVNVGDIFTGRVGSVEDYGAF 662
G + +KV + D EN ++ILS K A + Q++N GD+ G+V + +GAF
Sbjct: 151 GQTIRIKVEELDPENNRVILSRKAVEQEENDAKKDQLLQSLNEGDVIHGKVARLTQFGAF 210
Query: 663 IHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQL 842
I + D GLVHVSE+S ++VQ +V+ G +V+V + +ID++ RI+LSIK
Sbjct: 211 IDIGGVD------GLVHVSELSHEHVQTPEEVVSIGQDVKVKIKSIDRDTERISLSIKDT 264
Query: 843 EDDPLLETLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
P + D G +N G +E PG++ ++
Sbjct: 265 LPTPFENIKGQFHENDVIEGVVVRLANFGAFVEIAPGVQGLV 306
>sp|O84100|RS1_CHLTR 30S ribosomal protein S1 OS=Chlamydia trachomatis GN=rpsA
PE=3 SV=1
Length = 569
Score = 77 bits (187), Expect = 4e-013
Identities = 55/232 (23%), Positives = 113/232 (48%), Gaps = 35/232 (15%)
Frame = +3
Query: 201 FVVKSFSGSVTANTDTSSDQSLLRDTSNDAGPSRMSTD-------WKLAKAYCKSGDTFE 359
F+ S +V A + DQ T +D G +S + W+ A+C+ G +
Sbjct: 84 FIDSSEGLTVGAEVEVYLDQ-----TEDDEGKVVLSREKATRQRQWEYILAHCEEGSIVK 138
Query: 360 GEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAKTLVGSVLPVKVVQAD 539
G++ GGL++ + FLP Q+ K I + VG V K+++ +
Sbjct: 139 GQITRKVKGGLIVDI-GMEAFLPGSQID--------NKKIKNL-DDYVGKVCEFKILKIN 188
Query: 540 EENKKLILS-------EKLALWPKYSQNVNVGDIFTGRVGSVEDYGAFIHMRFDDGLYHL 698
+ + +++S E+++ + + + +G+ G V ++ D+G F+ + DG +
Sbjct: 189 VDRRNVVVSRRELLEAERISKKAELIEQITIGERRKGIVKNITDFGVFLDL---DG---I 242
Query: 699 TGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 854
GL+H+++++W ++ +++ E+ VI+ ++DKEK R+ L +KQ E +P
Sbjct: 243 DGLLHITDMTWKRIRHPSEMVELNQELEVIILSVDKEKGRVALGLKQKEHNP 294
>sp|Q5HP69|RS1_STAEQ 30S ribosomal protein S1 OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=rpsA PE=3 SV=1
Length = 392
Score = 77 bits (187), Expect = 4e-013
Identities = 67/246 (27%), Positives = 109/246 (44%), Gaps = 30/246 (12%)
Frame = +3
Query: 273 DTSNDAGPSRMS-------TDWKLAKAYCKSGDTFEGEVEGFNGGGLLIRFHSLVGFLPY 431
D ND G +S ++ + + + E EV GGL++ GF+P
Sbjct: 77 DEENDTGAYILSKRQLETEKSYEYLQEKLDNDEVIEAEVTEVVKGGLVVDVGQR-GFVPA 135
Query: 432 PQLSPSRSCREPQKSIHEIAKTLVGSVLPVKVVQADEENKKLILSEKL-------ALWPK 590
+S E G + +KV + D EN ++ILS K A
Sbjct: 136 SLIS---------TDFIEDFSVFDGQTIRIKVEELDPENNRVILSRKAVEQLENDAKKAS 186
Query: 591 YSQNVNVGDIFTGRVGSVEDYGAFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDG 770
++N GD+ G+V + ++GAFI + D GLVHVSE+S ++VQ +V+ G
Sbjct: 187 ILDSLNEGDVIDGKVARLTNFGAFIDIGGVD------GLVHVSELSHEHVQTPEEVVSVG 240
Query: 771 DEVRVIVTNIDKEKSRITLSIKQLEDDPLLETLDKVILKDSSGGSPSLSSNNGDTIEPLP 950
+ V+V V +++K+ RI+LSIK P K D G+ +N G +E P
Sbjct: 241 EAVKVKVKSVEKDSERISLSIKDTLPTPFENIKGKFHEDDVIEGTVVRLANFGAFVEIAP 300
Query: 951 GLETIL 968
++ ++
Sbjct: 301 SVQGLV 306
>sp|P38016|RS1_CHLMU 30S ribosomal protein S1 OS=Chlamydia muridarum GN=rpsA
PE=1 SV=2
Length = 570
Score = 76 bits (186), Expect = 5e-013
Identities = 55/232 (23%), Positives = 113/232 (48%), Gaps = 35/232 (15%)
Frame = +3
Query: 201 FVVKSFSGSVTANTDTSSDQSLLRDTSNDAGPSRMSTD-------WKLAKAYCKSGDTFE 359
F+ S SV A + DQ T ++ G +S + W+ A+C+ G +
Sbjct: 84 FIDSSEGLSVGAEVEVYLDQ-----TEDEEGKVVLSREKATRQRQWEYILAHCEEGSIVK 138
Query: 360 GEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAKTLVGSVLPVKVVQAD 539
G++ GGL++ + FLP Q+ K I + VG V K+++ +
Sbjct: 139 GQITRKVKGGLIVDI-GMEAFLPGSQID--------NKKIKNL-DDYVGKVCEFKILKIN 188
Query: 540 EENKKLILS-------EKLALWPKYSQNVNVGDIFTGRVGSVEDYGAFIHMRFDDGLYHL 698
+ + +++S E+++ + + + +G+ G V ++ D+G F+ + DG +
Sbjct: 189 VDRRNVVVSRRELLEAERISKKAELIEQITIGERRKGIVKNITDFGVFLDL---DG---I 242
Query: 699 TGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDP 854
GL+H+++++W ++ +++ E+ VI+ ++DKEK R+ L +KQ E +P
Sbjct: 243 DGLLHITDMTWKRIRHPSEMVELNQELEVIILSVDKEKGRVALGLKQKEHNP 294
>sp|Q49XT0|RS1_STAS1 30S ribosomal protein S1 OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=rpsA PE=3 SV=1
Length = 393
Score = 76 bits (186), Expect = 5e-013
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 23/216 (10%)
Frame = +3
Query: 342 SGDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAKTLVGSVLPV 521
+ T E +V GGL++ GF+P +S E G VL +
Sbjct: 107 NNQTIEAKVTEVVKGGLVVDVGQR-GFVPASLIS---------TDFIEDFSDFEGQVLKL 156
Query: 522 KVVQADEENKKLILSEKLA-------LWPKYSQNVNVGDIFTGRVGSVEDYGAFIHMRFD 680
KV + D N ++ILS K + +++N GD+ G+V + ++GAF+ +
Sbjct: 157 KVEELDPANNRVILSRKAVEALENAEKKDELLESLNEGDVIEGKVARLTNFGAFVDIGGV 216
Query: 681 DGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQLEDDPLL 860
D GLVHVSE+S ++V+ DV+ G+ V V + ++DK+ RI+LSIK P
Sbjct: 217 D------GLVHVSELSHEHVKSPEDVVSIGETVNVKIKSVDKDSERISLSIKDTLPSPFE 270
Query: 861 ETLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
+ D G+ +N G +E PG++ ++
Sbjct: 271 SIKGEFNEGDVIEGTVVRLANFGAFVEIKPGVQGLV 306
>sp|P46836|RS1_MYCLE 30S ribosomal protein S1 OS=Mycobacterium leprae GN=rpsA
PE=3 SV=2
Length = 481
Score = 75 bits (184), Expect = 8e-013
Identities = 54/187 (28%), Positives = 93/187 (49%), Gaps = 23/187 (12%)
Frame = +3
Query: 315 WKLAKAYCKSGDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEIAK 494
W +A + + +G V GGL++ L GFLP L R R+ Q
Sbjct: 113 WGTIEALKEKDEAVKGIVIEVVKGGLILDI-GLRGFLP-ASLVEMRRVRDLQ-------- 162
Query: 495 TLVGSVLPVKVVQADEENKKLILSEKLALWPKYSQ-------NVNVGDIFTGRVGSVEDY 653
+G + K+++ D+ ++LS + L S+ + G I G V S+ ++
Sbjct: 163 PYIGKEIEAKIIELDKNRNNVVLSRRAWLEQTQSEVRSEFLNQLQKGAIRKGVVSSIVNF 222
Query: 654 GAFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSI 833
GAF+ + D GLVHVSE+SW ++ +V++ G+EV V V ++D ++ R++LS+
Sbjct: 223 GAFVDLGGVD------GLVHVSELSWKHIDHPSEVVQVGNEVTVEVLDVDMDRERVSLSL 276
Query: 834 KQLEDDP 854
K ++DP
Sbjct: 277 KATQEDP 283
>sp|Q8RI52|ISPH_FUSNN 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
OS=Fusobacterium nucleatum subsp. nucleatum GN=ispH PE=3 SV=1
Length = 827
Score = 75 bits (182), Expect = 1e-012
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 17/223 (7%)
Frame = +3
Query: 312 DWKLAKAYCKSGDTFEGEVEGFNGGGLLIRFHSLVGFLPYPQLSPSRSCREPQKSIHEI- 488
+W+ + K+ + +V GG L+ GFLP S E S ++
Sbjct: 380 NWEKIEDSFKNKTILDAKVTKKIKGGYLVEAFLYPGFLP-------NSLSEISDSEEKVN 432
Query: 489 AKTLVGSVLPVKVVQADEENKKLILSEK---LALWPKYSQNVNVGDIFTGRVGSVEDYGA 659
K + V +K+ D++N+K+ S K LA K + VG I V V D+G
Sbjct: 433 GKKIQVIVKDIKMDPKDKKNRKITYSVKDIRLAEQEKEFAGLAVGQIVDCVVTEVLDFGL 492
Query: 660 FIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRITLSIKQ 839
+ + L G +H+SEVSW + + D + GD+++ +V ++D+ K + LSIK+
Sbjct: 493 AVDIN------TLKGFIHISEVSWKRLDKLSDNYKVGDKIKAVVVSLDEAKRNVKLSIKK 546
Query: 840 LEDDPLLETLDKVILKDSSGGSPSLSSNNGDTIEPLPGLETIL 968
LE+DP ++ + D G + G +E PG+E ++
Sbjct: 547 LEEDPWATVANEFKVDDEIEGIVTKVLPYGAFVEIKPGVEGLV 589
>sp|Q97I09|ISPH_CLOAB 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
OS=Clostridium acetobutylicum GN=ispH PE=3 SV=1
Length = 642
Score = 72 bits (174), Expect = 1e-011
Identities = 40/130 (30%), Positives = 73/130 (56%), Gaps = 15/130 (11%)
Frame = +3
Query: 492 KTLVGSVLPVKVVQ-ADEENKKLILSEKLALWPKYSQNV--------NVGDIFTGRVGSV 644
K +G V +++ + ++ + I++ + AL K + V G + G V +
Sbjct: 435 KEYIGKSFDVAIIEYSTKKRQTKIVASRRALLSKEKEKVEETVWNKLEEGQVVEGEVKRL 494
Query: 645 EDYGAFIHMRFDDGLYHLTGLVHVSEVSWDYVQDVRDVLRDGDEVRVIVTNIDKEKSRIT 824
D+GAF+ + D GL+HVSE+SW V+ DVL+ GD+++V V ++DKE +++
Sbjct: 495 TDFGAFVEIEGVD------GLLHVSEISWGRVEKPADVLKIGDKIKVYVLSVDKENKKLS 548
Query: 825 LSIKQLEDDP 854
LS+K+L ++P
Sbjct: 549 LSVKKLTENP 558
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,533,745,664
Number of Sequences: 518415
Number of Extensions: 12533745664
Number of Successful Extensions: 80211091
Number of sequences better than 0.0: 0
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