Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN02948


BLASTX 7.6.2

Query= UN02948 /QuerySize=682
        (681 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297828203|ref|XP_002881984.1| hypothetical protein ARALYDRAFT...     99   4e-019
gi|8778315|gb|AAF79324.1|AC002304_17 F14J16.29 [Arabidopsis thal...     82   8e-014
gi|297802640|ref|XP_002869204.1| hypothetical protein ARALYDRAFT...     77   2e-012
gi|15235006|ref|NP_195087.1| glycine-rich protein [Arabidopsis t...     77   2e-012
gi|15222816|ref|NP_175995.1| glycine-rich protein [Arabidopsis t...     72   5e-011
gi|8778320|gb|AAF79329.1|AC002304_22 F14J16.30 [Arabidopsis thal...     72   5e-011

>gi|297828203|ref|XP_002881984.1| hypothetical protein ARALYDRAFT_903922
        [Arabidopsis lyrata subsp. lyrata]

          Length = 129

 Score =  99 bits (246), Expect = 4e-019
 Identities = 50/67 (74%), Positives = 55/67 (82%), Gaps = 4/67 (5%)
 Frame = -1

Query: 360 PTMP--TSIPPLPSTLPQTNLPTIPTSIPPIPMPTLPSFPTTIPSLPTNFPSIPMFSPPP 187
           PTMP  TS  P+PSTLPQ NLPTIPT++P  PMPTLPSFPT I SLPTN PSIP FSPPP
Sbjct:  65 PTMPTVTSPFPMPSTLPQPNLPTIPTAMP--PMPTLPSFPTIISSLPTNLPSIPFFSPPP 122

Query: 186 TTSKSSP 166
           +T+ SSP
Sbjct: 123 STTTSSP 129


 Score =  81 bits (199), Expect = 1e-013
 Identities = 43/65 (66%), Positives = 45/65 (69%)
 Frame = -3

Query: 598 MASFKLFLIAVLVSLSSSITINTCSASRHLLQQQPLPQIPNMPIPTVDYLPCHRPCHNQL 419
           MAS+KLFLIA LVSLSSS  INTCSASR LLQQQPLPQIPN+PIPT    P         
Sbjct:   1 MASYKLFLIAFLVSLSSSTMINTCSASRKLLQQQPLPQIPNLPIPTTGLPPLPSTLPQPS 60

Query: 418 FPQCP 404
            P  P
Sbjct:  61 LPTLP 65

>gi|8778315|gb|AAF79324.1|AC002304_17 F14J16.29 [Arabidopsis thaliana]

          Length = 143

 Score =  82 bits (200), Expect = 8e-014
 Identities = 42/65 (64%), Positives = 47/65 (72%)
 Frame = -3

Query: 598 MASFKLFLIAVLVSLSSSITINTCSASRHLLQQQPLPQIPNMPIPTVDYLPCHRPCHNQL 419
           MAS+KLFLIA LVS+SSS+ INTCSASR LLQQQPLPQIPN+PIPT+   P         
Sbjct:   1 MASYKLFLIAFLVSVSSSMMINTCSASRRLLQQQPLPQIPNLPIPTMGLPPLPSTLPQPS 60

Query: 418 FPQCP 404
            P  P
Sbjct:  61 LPTMP 65


 Score =  79 bits (193), Expect = 5e-013
 Identities = 43/69 (62%), Positives = 48/69 (69%), Gaps = 10/69 (14%)
 Frame = -1

Query: 366 NFPTMPTSIP--PLPSTLPQTNLPTIPTSIPPIPMPTLPSFPTTIPSLPTNFPSIPMFSP 193
           + PTMPT++   P+PS LPQ NLPTIPT+     MPTLPSFPTTIPSLPTN PSIP    
Sbjct:  60 SLPTMPTAMSPFPMPSALPQPNLPTIPTA-----MPTLPSFPTTIPSLPTNLPSIPSL-- 112

Query: 192 PPTTSKSSP 166
            PT   S P
Sbjct: 113 -PTNLPSIP 120


 Score =  77 bits (187), Expect = 2e-012
 Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 4/67 (5%)
 Frame = -1

Query: 366 NFPTMPTSIPPLPSTLPQTNLPTIPTSIPPIPMPTLPSFPTTIPSLPTNFPSIPMFSPPP 187
           N PT+PT++P LPS    T +P++PT++P I  P+LP+   +IPSLPT+ PSIP FSPPP
Sbjct:  81 NLPTIPTAMPTLPSF--PTTIPSLPTNLPSI--PSLPTNLPSIPSLPTSLPSIPFFSPPP 136

Query: 186 TTSKSSP 166
           +T+ SSP
Sbjct: 137 STTTSSP 143


 Score =  65 bits (157), Expect = 7e-009
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
 Frame = -1

Query: 366 NFPTMPTSIPPLPSTLPQTNLPTIPTSIPPIPMPTLPSFPTTIPSLPTNFPSIPMFSPPP 187
           N P     +PPLPSTLPQ +LPT+PT++ P PMP+    P  +P++PT  P++P F   P
Sbjct:  41 NLPIPTMGLPPLPSTLPQPSLPTMPTAMSPFPMPSALPQP-NLPTIPTAMPTLPSF---P 96

Query: 186 TTSKSSP 166
           TT  S P
Sbjct:  97 TTIPSLP 103


 Score =  62 bits (150), Expect = 5e-008
 Identities = 28/42 (66%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
 Frame = -2

Query: 467 PNSGLPPLPSTLPQPTLPTMPTSIP--PLPSTLPQPTFPPCP 348
           P  GLPPLPSTLPQP+LPTMPT++   P+PS LPQP  P  P
Sbjct:  45 PTMGLPPLPSTLPQPSLPTMPTAMSPFPMPSALPQPNLPTIP 86

>gi|297802640|ref|XP_002869204.1| hypothetical protein ARALYDRAFT_491323
        [Arabidopsis lyrata subsp. lyrata]

          Length = 145

 Score =  77 bits (188), Expect = 2e-012
 Identities = 44/69 (63%), Positives = 51/69 (73%), Gaps = 7/69 (10%)
 Frame = +2

Query: 167 GLDLDVVGGGENIGMDGKLVGREGIVVGNEGKVGIGIGGIEVGIVGRFVCGNVDGSGG-- 340
           G+D  +VG     GMDG+LVGREGIVVGNEGKV  G GGI VGIVGRF CG  DG+G   
Sbjct:  17 GMDGRLVG---REGMDGRLVGREGIVVGNEGKV--GTGGIPVGIVGRFGCGKADGNGNGD 71

Query: 341 IEVGMVGKL 367
           I VG+VG++
Sbjct:  72 IAVGIVGRV 80


 Score =  67 bits (163), Expect = 1e-009
 Identities = 43/72 (59%), Positives = 45/72 (62%), Gaps = 6/72 (8%)
 Frame = +3

Query: 405 GHCGKSWLWQGRWQGR*STVGIGIFGI*GRGCCWRRWREAEQVLIVIEEERLTKTAMRKS 584
           G  GK         G    VGIG FGI     CWRR R+AE VLI+IEEERLTK AMRKS
Sbjct:  78 GRVGKDGCGNVDGNGGSPIVGIGRFGI-----CWRRRRDAEHVLIIIEEERLTKKAMRKS 132

Query: 585 LNDAI-LDVLMN 617
           L DAI L VLMN
Sbjct: 133 LYDAIDLGVLMN 144

>gi|15235006|ref|NP_195087.1| glycine-rich protein [Arabidopsis thaliana]

          Length = 115

 Score =  77 bits (187), Expect = 2e-012
 Identities = 44/75 (58%), Positives = 54/75 (72%), Gaps = 7/75 (9%)
 Frame = +2

Query: 149 KYISIQGLDLDVVGGGENIGMDGKLVGREGIVVGNEGKVGIGIGGIEVGIVGRFVCGNVD 328
           + +  +G+D  +VG     GMDG LVGREGIVVGNEGKV  GIGGI VG+VGRF CG  D
Sbjct:  22 RLVGREGMDGRLVG---REGMDGILVGREGIVVGNEGKV--GIGGIAVGMVGRFGCGKAD 76

Query: 329 --GSGGIEVGMVGKL 367
             G+G I VG+VG++
Sbjct:  77 GIGNGDIAVGIVGRV 91

>gi|15222816|ref|NP_175995.1| glycine-rich protein [Arabidopsis thaliana]

          Length = 139

 Score =  72 bits (176), Expect = 5e-011
 Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 10/74 (13%)
 Frame = +2

Query: 149 KYISIQGLDLDVVGGGENIGMDGKLVGREGIVVGNEGKVGIGIGGIEVGIVGRFVCGNVD 328
           + +  +G+D  +VG     GMDG+LVGREGIVVGNEGKVGI      VG+VGRF CG  D
Sbjct:  22 RLVGREGMDGRLVG---REGMDGRLVGREGIVVGNEGKVGIA-----VGMVGRFGCGKAD 73

Query: 329 --GSGGIEVGMVGK 364
             G+G I VG+VGK
Sbjct:  74 GIGNGDIAVGIVGK 87


 Score =  72 bits (176), Expect = 5e-011
 Identities = 35/41 (85%), Positives = 37/41 (90%)
 Frame = +3

Query: 495 GCCWRRWREAEQVLIVIEEERLTKTAMRKSLNDAILDVLMN 617
           GCCWRR REAEQVLI+IEEE LTK AMRKSL DAILDVL+N
Sbjct:  98 GCCWRRRREAEQVLIIIEEETLTKKAMRKSLYDAILDVLIN 138

>gi|8778320|gb|AAF79329.1|AC002304_22 F14J16.30 [Arabidopsis thaliana]

          Length = 109

 Score =  72 bits (176), Expect = 5e-011
 Identities = 42/74 (56%), Positives = 51/74 (68%), Gaps = 10/74 (13%)
 Frame = +2

Query: 149 KYISIQGLDLDVVGGGENIGMDGKLVGREGIVVGNEGKVGIGIGGIEVGIVGRFVCGNVD 328
           + +  +G+D  +VG     GMDG+LVGREGIVVGNEGKVGI      VG+VGRF CG  D
Sbjct:  22 RLVGREGMDGRLVG---REGMDGRLVGREGIVVGNEGKVGIA-----VGMVGRFGCGKAD 73

Query: 329 --GSGGIEVGMVGK 364
             G+G I VG+VGK
Sbjct:  74 GIGNGDIAVGIVGK 87


 Score =  56 bits (134), Expect = 3e-006
 Identities = 26/42 (61%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
 Frame = +1

Query: 349 GHGGKVGCGNVD--GNGGIEVGIVGRVGCGKVDGKGGSPLLG 468
           G  G+ GCG  D  GNG I VGIVG+ GCG VDG GGSP++G
Sbjct:  62 GMVGRFGCGKADGIGNGDIAVGIVGKDGCGNVDGNGGSPIVG 103

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 359,848,489,672
Number of Sequences: 15229318
Number of Extensions: 359848489672
Number of Successful Extensions: 91916522
Number of sequences better than 0.0: 0