Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN03077


BLASTX 7.6.2

Query= UN03077 /QuerySize=844
        (843 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G03480.1 | Symbols:  | nucleic acid binding / ...     67   1e-011
TAIR9_protein||AT5G03495.1 | Symbols:  | nucleotide binding | ch...     60   1e-009
TAIR9_protein||AT3G09160.1 | Symbols:  | RNA recognition motif (...     50   1e-006

>TAIR9_protein||AT5G03480.1 | Symbols:  | nucleic acid binding / nucleotide
        binding | chr5:869208-870855 REVERSE

          Length = 322

 Score =  67 bits (162), Expect = 1e-011
 Identities = 59/176 (33%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
 Frame = +1

Query: 103 ISRMSVEGYDTSSSREDVEEALRKHFAS-REIKLIHASAPQVDDRHTILCRYALIYLNEE 279
           I+ +SVEGYDTS  +  +E  L KHF S  EI+  H   P   +R  +     L    E 
Sbjct: 112 ITTISVEGYDTSLQKYLLELILEKHFDSCGEIR--HVYVPTDYERGVLKSVAFLRIEGEG 169

Query: 280 DEEKALKFDGSDMGGRILRVAVYPFDSNHLEHFFAPTKAQDKYRRRLLYVAGFDPSLTKD 459
            E+KAL+  G+D+ G    V V P +  +     AP    +  +     V G+D SL + 
Sbjct: 170 AEDKALQLSGTDVVG--WTVIVKPSEIFYDNSSRAPATTPEASKIHRFRVTGYDASLPEI 227

Query: 460 DTNVMVRRLFPGSGCAVLGEGRV-----FVKLGGQDAIDKALQLSGDSVGGFTIVV 612
           D  + + + F  S C  + +  V     FV L G+  +DKAL+LSG ++G  T+VV
Sbjct: 228 DIQMALCKHF--SSCGEIWQVTVLSSTAFVSLRGERCVDKALELSGCNMGERTLVV 281


 Score =  50 bits (118), Expect = 2e-006
 Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
 Frame = +1

Query:  40 IKGVEGLELNGSDAAIRKSRRISRMSVEGYDTSSSREDVEEALRKHFAS-REIKLIHASA 216
           IK ++ LELN SD    K    + + VEGYDTS     +  AL KHFAS  EI  I+   
Sbjct:   6 IKRLKSLELNDSD----KQSTSTAICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPR 61

Query: 217 PQVDDRHTILCRYALIYLNEED-EEKALKFDGSDMGG 324
              D +  IL   + +++  E  E+KAL+  G+D+GG
Sbjct:  62 ---DFKKKILKSVSFMWIKGEGAEDKALQLSGTDVGG 95

>TAIR9_protein||AT5G03495.1 | Symbols:  | nucleotide binding |
        chr5:873804-875025 REVERSE

          Length = 227

 Score =  60 bits (145), Expect = 1e-009
 Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
 Frame = +1

Query:  25 MDESVIKGVEGLELNGSDAAIRKSR-RISRMSVEGYDTSSSREDVEEALRKHFASREIKL 201
           MDES IKG++ L+LN   A  RK R   +++SVEGYDT      V+  L KHFAS   K+
Sbjct:   1 MDESAIKGMKLLQLNEIGANSRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCG-KI 59

Query: 202 IHASAPQVDDRHTILCRYALIYLNEEDEEKALKFDGSDMGG 324
            H   P+  +R  +     +    E  EEKAL   G+D GG
Sbjct:  60 THIYVPRDFERGILKSVAFMCIKGEGGEEKALLLSGTDAGG 100

>TAIR9_protein||AT3G09160.1 | Symbols:  | RNA recognition motif (RRM)-containing
        protein | chr3:2805779-2806912 REVERSE

          Length = 199

 Score =  50 bits (119), Expect = 1e-006
 Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
 Frame = +1

Query:  61 ELNGSDAAIRKSRR-----ISRMSVEGYDTSSSREDVEEALRKHFA-SREIKLIHASAPQ 222
           E+      +++SR+     I R+SV GYD    RE VE  L+K F+   EI  +H     
Sbjct:   3 EIANKGLEVKRSRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIP--- 59

Query: 223 VDDRHTILCRYALIY-LNEEDEEKALKFDGSDMGGRILRVAVYPF 354
            + R++ L  +A IY + E   +KAL+ +GSDMGG  +     PF
Sbjct:  60 -ETRNSSLWSHAFIYFVGEGTADKALQLNGSDMGGWTVDAEADPF 103

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,246,016,146
Number of Sequences: 33410
Number of Extensions: 2246016146
Number of Successful Extensions: 79715282
Number of sequences better than 0.0: 0