BLASTX 7.6.2
Query= UN03077 /QuerySize=844
(843 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 67 1e-011
TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding | ch... 60 1e-009
TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (... 50 1e-006
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 67 bits (162), Expect = 1e-011
Identities = 59/176 (33%), Positives = 87/176 (49%), Gaps = 12/176 (6%)
Frame = +1
Query: 103 ISRMSVEGYDTSSSREDVEEALRKHFAS-REIKLIHASAPQVDDRHTILCRYALIYLNEE 279
I+ +SVEGYDTS + +E L KHF S EI+ H P +R + L E
Sbjct: 112 ITTISVEGYDTSLQKYLLELILEKHFDSCGEIR--HVYVPTDYERGVLKSVAFLRIEGEG 169
Query: 280 DEEKALKFDGSDMGGRILRVAVYPFDSNHLEHFFAPTKAQDKYRRRLLYVAGFDPSLTKD 459
E+KAL+ G+D+ G V V P + + AP + + V G+D SL +
Sbjct: 170 AEDKALQLSGTDVVG--WTVIVKPSEIFYDNSSRAPATTPEASKIHRFRVTGYDASLPEI 227
Query: 460 DTNVMVRRLFPGSGCAVLGEGRV-----FVKLGGQDAIDKALQLSGDSVGGFTIVV 612
D + + + F S C + + V FV L G+ +DKAL+LSG ++G T+VV
Sbjct: 228 DIQMALCKHF--SSCGEIWQVTVLSSTAFVSLRGERCVDKALELSGCNMGERTLVV 281
Score = 50 bits (118), Expect = 2e-006
Identities = 38/97 (39%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Frame = +1
Query: 40 IKGVEGLELNGSDAAIRKSRRISRMSVEGYDTSSSREDVEEALRKHFAS-REIKLIHASA 216
IK ++ LELN SD K + + VEGYDTS + AL KHFAS EI I+
Sbjct: 6 IKRLKSLELNDSD----KQSTSTAICVEGYDTSLKEYPLRLALTKHFASCGEITQIYVPR 61
Query: 217 PQVDDRHTILCRYALIYLNEED-EEKALKFDGSDMGG 324
D + IL + +++ E E+KAL+ G+D+GG
Sbjct: 62 ---DFKKKILKSVSFMWIKGEGAEDKALQLSGTDVGG 95
>TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding |
chr5:873804-875025 REVERSE
Length = 227
Score = 60 bits (145), Expect = 1e-009
Identities = 42/101 (41%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Frame = +1
Query: 25 MDESVIKGVEGLELNGSDAAIRKSR-RISRMSVEGYDTSSSREDVEEALRKHFASREIKL 201
MDES IKG++ L+LN A RK R +++SVEGYDT V+ L KHFAS K+
Sbjct: 1 MDESAIKGMKLLQLNEIGANSRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCG-KI 59
Query: 202 IHASAPQVDDRHTILCRYALIYLNEEDEEKALKFDGSDMGG 324
H P+ +R + + E EEKAL G+D GG
Sbjct: 60 THIYVPRDFERGILKSVAFMCIKGEGGEEKALLLSGTDAGG 100
>TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:2805779-2806912 REVERSE
Length = 199
Score = 50 bits (119), Expect = 1e-006
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Frame = +1
Query: 61 ELNGSDAAIRKSRR-----ISRMSVEGYDTSSSREDVEEALRKHFA-SREIKLIHASAPQ 222
E+ +++SR+ I R+SV GYD RE VE L+K F+ EI +H
Sbjct: 3 EIANKGLEVKRSRKIRDSDIERISVTGYDIELPREHVESELKKLFSPCGEITDVHIP--- 59
Query: 223 VDDRHTILCRYALIY-LNEEDEEKALKFDGSDMGGRILRVAVYPF 354
+ R++ L +A IY + E +KAL+ +GSDMGG + PF
Sbjct: 60 -ETRNSSLWSHAFIYFVGEGTADKALQLNGSDMGGWTVDAEADPF 103
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,246,016,146
Number of Sequences: 33410
Number of Extensions: 2246016146
Number of Successful Extensions: 79715282
Number of sequences better than 0.0: 0
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