BLASTX 7.6.2
Query= UN03193 /QuerySize=1167
(1166 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G32400.1 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS... 510 9e-145
TAIR9_protein||AT1G32400.2 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS... 510 9e-145
TAIR9_protein||AT1G32400.3 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS... 510 9e-145
TAIR9_protein||AT2G20230.1 | Symbols: | LOCATED IN: plasma memb... 120 3e-027
TAIR9_protein||AT4G28770.1 | Symbols: | FUNCTIONS IN: molecular... 115 8e-026
TAIR9_protein||AT2G20740.2 | Symbols: | unknown protein | chr2:... 94 2e-019
TAIR9_protein||AT2G20740.1 | Symbols: | FUNCTIONS IN: molecular... 94 2e-019
>TAIR9_protein||AT1G32400.1 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS MULTIPLICATION
2A); protein binding | chr1:11689393-11690873 REVERSE
Length = 281
Score = 510 bits (1312), Expect = 9e-145
Identities = 249/282 (88%), Positives = 264/282 (93%), Gaps = 4/282 (1%)
Frame = -2
Query: 1045 MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYQRATDDHSVSF---IPDQSYVSSG 875
MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEY+R T D+SV+F DQSYVS G
Sbjct: 1 MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVT-DNSVTFDLTNGDQSYVSFG 59
Query: 874 RPMLMALALSSNVFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSICCLSCYSLLLI 695
RP+LMA++LSSN+FDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRS+CCLSCYSLLLI
Sbjct: 60 RPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLI 119
Query: 694 LLILAELEAAAFIFFDNSWRDQIPSDKTGNFDTIYHFLRENWNIVRWVALGAVVFEALLF 515
LLIL EL AAFIFFDNSWRD++PSD+TGNFDTIY+FLRENW IVRWVALGAVVFEALLF
Sbjct: 120 LLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLF 179
Query: 514 LLALMVRAANTPDEYDSDDEFIAPPRQIRQPFINRNPAPVTGVPVAPTLDQRPSRSDPWS 335
LLALMVRAANTP EYDSDDE++AP +QIRQPFINR APVTGVPVAPTLDQRPSRSDPWS
Sbjct: 180 LLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWS 239
Query: 334 ARMREKYGLDTSEFTYNPSESHRFQQMPTQPNEEKGRCTIM* 209
ARMREKYGLDTSEFTYNPSESHRFQQMP QPNEEKGRCTIM*
Sbjct: 240 ARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM* 281
>TAIR9_protein||AT1G32400.2 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS MULTIPLICATION
2A); protein binding | chr1:11689393-11690873 REVERSE
Length = 281
Score = 510 bits (1312), Expect = 9e-145
Identities = 249/282 (88%), Positives = 264/282 (93%), Gaps = 4/282 (1%)
Frame = -2
Query: 1045 MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYQRATDDHSVSF---IPDQSYVSSG 875
MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEY+R T D+SV+F DQSYVS G
Sbjct: 1 MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVT-DNSVTFDLTNGDQSYVSFG 59
Query: 874 RPMLMALALSSNVFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSICCLSCYSLLLI 695
RP+LMA++LSSN+FDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRS+CCLSCYSLLLI
Sbjct: 60 RPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLI 119
Query: 694 LLILAELEAAAFIFFDNSWRDQIPSDKTGNFDTIYHFLRENWNIVRWVALGAVVFEALLF 515
LLIL EL AAFIFFDNSWRD++PSD+TGNFDTIY+FLRENW IVRWVALGAVVFEALLF
Sbjct: 120 LLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLF 179
Query: 514 LLALMVRAANTPDEYDSDDEFIAPPRQIRQPFINRNPAPVTGVPVAPTLDQRPSRSDPWS 335
LLALMVRAANTP EYDSDDE++AP +QIRQPFINR APVTGVPVAPTLDQRPSRSDPWS
Sbjct: 180 LLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWS 239
Query: 334 ARMREKYGLDTSEFTYNPSESHRFQQMPTQPNEEKGRCTIM* 209
ARMREKYGLDTSEFTYNPSESHRFQQMP QPNEEKGRCTIM*
Sbjct: 240 ARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM* 281
>TAIR9_protein||AT1G32400.3 | Symbols: TOM2A | TOM2A (TOBAMOVIRUS MULTIPLICATION
2A); protein binding | chr1:11689393-11690873 REVERSE
Length = 281
Score = 510 bits (1312), Expect = 9e-145
Identities = 249/282 (88%), Positives = 264/282 (93%), Gaps = 4/282 (1%)
Frame = -2
Query: 1045 MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYQRATDDHSVSF---IPDQSYVSSG 875
MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEY+R T D+SV+F DQSYVS G
Sbjct: 1 MACRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYKRVT-DNSVTFDLTNGDQSYVSFG 59
Query: 874 RPMLMALALSSNVFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSICCLSCYSLLLI 695
RP+LMA++LSSN+FDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRS+CCLSCYSLLLI
Sbjct: 60 RPILMAVSLSSNIFDNLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSVCCLSCYSLLLI 119
Query: 694 LLILAELEAAAFIFFDNSWRDQIPSDKTGNFDTIYHFLRENWNIVRWVALGAVVFEALLF 515
LLIL EL AAFIFFDNSWRD++PSD+TGNFDTIY+FLRENW IVRWVALGAVVFEALLF
Sbjct: 120 LLILVELGFAAFIFFDNSWRDELPSDRTGNFDTIYNFLRENWKIVRWVALGAVVFEALLF 179
Query: 514 LLALMVRAANTPDEYDSDDEFIAPPRQIRQPFINRNPAPVTGVPVAPTLDQRPSRSDPWS 335
LLALMVRAANTP EYDSDDE++AP +QIRQPFINR APVTGVPVAPTLDQRPSRSDPWS
Sbjct: 180 LLALMVRAANTPAEYDSDDEYLAPRQQIRQPFINRQAAPVTGVPVAPTLDQRPSRSDPWS 239
Query: 334 ARMREKYGLDTSEFTYNPSESHRFQQMPTQPNEEKGRCTIM* 209
ARMREKYGLDTSEFTYNPSESHRFQQMP QPNEEKGRCTIM*
Sbjct: 240 ARMREKYGLDTSEFTYNPSESHRFQQMPAQPNEEKGRCTIM* 281
>TAIR9_protein||AT2G20230.1 | Symbols: | LOCATED IN: plasma membrane, vacuole;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 16 growth stages;
CONTAINS InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G28770.1); Has 91 Blast hits to 91 proteins in 12 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 90; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink). | chr2:8725762-8727388
FORWARD
Length = 271
Score = 120 bits (299), Expect = 3e-027
Identities = 84/271 (30%), Positives = 132/271 (48%), Gaps = 37/271 (13%)
Frame = -2
Query: 1039 CRGCLECLLKLLNFLLAVAGLGMIGYGIYLFVEYQR----ATDDHSVSFIPDQSYVSSGR 872
C LK+LNF+ A G+ +I Y I++ EY R + S + S
Sbjct: 6 CHVSFASTLKILNFVQAFIGVSIIIYSIWMLHEYSRHLPVDPPPSASSSSGTEIATSVSE 65
Query: 871 PM------LMALALSSNVFD--------NLPKAWFIYLFIGIGVALFVISCCGCVGTCSR 734
P+ + ++ L SN D +LP WFIY F+ +G+ + +++ G + +
Sbjct: 66 PLKNPIDFVASIILGSNGGDHGFNLRSLDLPAPWFIYSFMAVGILVCIVTFIGFIAAEAI 125
Query: 733 SICCLSCYSLLLILLILAELEAAAFIFFDNSWRDQIPSDKTGNFDTIYHFLRENWNIVRW 554
+ CCL YS+L LLIL E A+I D W +P D TG ++ F+ EN +I +W
Sbjct: 126 NGCCLCFYSILKTLLILLEAALVAYIAIDRHWEKDLPYDPTGELSSLRAFIEENIDICKW 185
Query: 553 VALGAVVFEALLFLLALMVRA-ANTP-DEYDSDDEFIAPPRQIRQPFINRNPAPVTGVP- 383
V + V + L LLA+++RA +TP E D +++ + NP T P
Sbjct: 186 VGIAVVAVQLLSLLLAMVLRAMVSTPKPELDEEED-------------DENPRSRTWDPL 232
Query: 382 VAPTLDQRP---SRSDPWSARMREKYGLDTS 299
+ P +Q P S+ + WS+R+REKYGL+ S
Sbjct: 233 LGPQGNQAPAGSSKIENWSSRIREKYGLNQS 263
>TAIR9_protein||AT4G28770.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: plasma membrane, vacuole, membrane; EXPRESSED IN:
26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT2G20230.1); Has 94
Blast hits to 94 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1
(source: NCBI BLink). | chr4:14212177-14213518 REVERSE
Length = 282
Score = 115 bits (286), Expect = 8e-026
Identities = 64/186 (34%), Positives = 97/186 (52%), Gaps = 12/186 (6%)
Frame = -2
Query: 829 NLPKAWFIYLFIGIGVALFVISCCGCVGTCSRSICCLSCYSLLLILLILAELEAAAFIFF 650
+LP WFIY F+ IG+ + +++ G + + + CCL YS+L LLI+ E FI
Sbjct: 105 DLPAPWFIYCFMAIGILVCIVTIIGFIAAEAINGCCLCFYSILKTLLIIIEAALVGFIVI 164
Query: 649 DNSWRDQIPSDKTGNFDTIYHFLRENWNIVRWVALGAVVFEALLFLLALMVRAANTP--D 476
D W +P D TG +++ F+ EN +I +WV + V + L LLAL++RA +P
Sbjct: 165 DRHWEKDLPYDPTGELNSLRAFIEENIDICKWVGIVVVAIQLLSLLLALVLRAMVSPRQS 224
Query: 475 EYDSDDEFIAPPRQIRQPFINRNPAPVTGVPVAPTLDQRPSRSDPWSARMREKYGLDTSE 296
E D +D+F P + R + P A S D W +R+REKYGL S+
Sbjct: 225 ELDDEDDFENPMSRARDNLLG---------PQANQTSSGSSNIDNWRSRIREKYGLINSQ 275
Query: 295 FTYNPS 278
++ PS
Sbjct: 276 -SHTPS 280
>TAIR9_protein||AT2G20740.2 | Symbols: | unknown protein | chr2:8935911-8937292
FORWARD
Length = 181
Score = 94 bits (231), Expect = 2e-019
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Frame = -2
Query: 823 PKAWFIYLFIGIGVALFVISCCGCVGTCSRSICCLSCYSLLLILLILAELEAAAFIFFDN 644
P WFIY F+G+G L V++C G + + + CCL Y ++LL + E A IF +
Sbjct: 12 PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNR 71
Query: 643 SWRDQIPSDKTGNFDTIYHFLRENWNIVRWVALGAVVFEALLFLLALMVRA--ANTPDEY 470
W+ P D +G F F+ N+ I +W+ L V + L L+A++++A + Y
Sbjct: 72 DWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHY 131
Query: 469 DSDDEF----IAPPRQIRQPFINRNPAPVTGVPV 380
DSDDE+ +A + RQP P V G P+
Sbjct: 132 DSDDEYNVSTVALLQDARQP-----PPYVVGEPM 160
>TAIR9_protein||AT2G20740.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system, integral to membrane; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Tetraspanin (InterPro:IPR018499); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G20230.1); Has 91 Blast hits
to 91 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink). | chr2:8935788-8937292 FORWARD
Length = 222
Score = 94 bits (231), Expect = 2e-019
Identities = 51/154 (33%), Positives = 79/154 (51%), Gaps = 11/154 (7%)
Frame = -2
Query: 823 PKAWFIYLFIGIGVALFVISCCGCVGTCSRSICCLSCYSLLLILLILAELEAAAFIFFDN 644
P WFIY F+G+G L V++C G + + + CCL Y ++LL + E A IF +
Sbjct: 53 PVPWFIYSFLGLGAILCVVTCAGHIAAETVNGCCLYLYMGFIVLLTMVEGGVVADIFLNR 112
Query: 643 SWRDQIPSDKTGNFDTIYHFLRENWNIVRWVALGAVVFEALLFLLALMVRA--ANTPDEY 470
W+ P D +G F F+ N+ I +W+ L V + L L+A++++A + Y
Sbjct: 113 DWKKDFPEDPSGAFHQFSKFIESNFKICKWIGLSIVCVQGLSVLIAMLLKALGPHPHRHY 172
Query: 469 DSDDEF----IAPPRQIRQPFINRNPAPVTGVPV 380
DSDDE+ +A + RQP P V G P+
Sbjct: 173 DSDDEYNVSTVALLQDARQP-----PPYVVGEPM 201
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,340,731,947
Number of Sequences: 33410
Number of Extensions: 2340731947
Number of Successful Extensions: 84968550
Number of sequences better than 0.0: 0
|
