Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN03211


BLASTX 7.6.2

Query= UN03211 /QuerySize=999
        (998 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|15224909|ref|NP_181395.1| RNA-binding KH domain-containing pr...    190   3e-046
gi|255582022|ref|XP_002531808.1| conserved hypothetical protein ...    162   1e-037
gi|224069102|ref|XP_002326275.1| predicted protein [Populus tric...    157   3e-036
gi|224140633|ref|XP_002323686.1| predicted protein [Populus tric...    157   4e-036
gi|225439096|ref|XP_002268790.1| PREDICTED: hypothetical protein...    156   9e-036
gi|255647494|gb|ACU24211.1| unknown [Glycine max]                      156   9e-036
gi|12322716|gb|AAG51340.1|AC012562_1 unknown protein; 28504-3123...    154   2e-035
gi|255637373|gb|ACU19015.1| unknown [Glycine max]                      151   2e-034
gi|255637478|gb|ACU19066.1| unknown [Glycine max]                      151   2e-034
gi|30680583|ref|NP_187474.2| RNA-binding KH domain-containing pr...    151   3e-034
gi|40645104|dbj|BAD06470.1| hypothetical protein [Nicotiana taba...    148   1e-033
gi|297829386|ref|XP_002882575.1| KH domain-containing protein [A...    146   5e-033
gi|255585282|ref|XP_002533340.1| nucleic acid binding protein, p...    128   1e-027
gi|147766029|emb|CAN61397.1| hypothetical protein VITISV_015779 ...    126   9e-027
gi|115471235|ref|NP_001059216.1| Os07g0227400 [Oryza sativa Japo...    124   3e-026
gi|125599596|gb|EAZ39172.1| hypothetical protein OsJ_23597 [Oryz...    124   3e-026
gi|225434301|ref|XP_002264308.1| PREDICTED: hypothetical protein...    123   5e-026
gi|115456169|ref|NP_001051685.1| Os03g0815700 [Oryza sativa Japo...    120   5e-025
gi|224145398|ref|XP_002325628.1| predicted protein [Populus tric...    119   9e-025
gi|326514498|dbj|BAJ96236.1| predicted protein [Hordeum vulgare ...    117   3e-024

>gi|15224909|ref|NP_181395.1| RNA-binding KH domain-containing protein
        [Arabidopsis thaliana]

          Length = 286

 Score =  190 bits (482), Expect = 3e-046
 Identities = 99/110 (90%), Positives = 100/110 (90%), Gaps = 3/110 (2%)
 Frame = +2

Query: 128 SGLYNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQE 307
           SGLY NNSSYFSPARAASPQIRSTPEIDSSQYLTELL EHQKLTPFMQVLPICSRLLNQE
Sbjct:   2 SGLY-NNSSYFSPARAASPQIRSTPEIDSSQYLTELLAEHQKLTPFMQVLPICSRLLNQE 60

Query: 308 MFRVSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWNRAS 457
           MFRVSGMM NQG   GDFDRLRHRSPSPMASSNLMSNVSN+GL  WN  S
Sbjct:  61 MFRVSGMMSNQG--FGDFDRLRHRSPSPMASSNLMSNVSNTGLGGWNGLS 108

>gi|255582022|ref|XP_002531808.1| conserved hypothetical protein [Ricinus
        communis]

          Length = 680

 Score =  162 bits (408), Expect = 1e-037
 Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 6/104 (5%)
 Frame = +2

Query: 137 YNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFR 316
           YN N   FSPARAASPQIRSTP++D SQYL+ELL EHQKL PFMQVLPICSRLLNQE+FR
Sbjct:   5 YNPN---FSPARAASPQIRSTPDVD-SQYLSELLAEHQKLGPFMQVLPICSRLLNQEIFR 60

Query: 317 VSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           VSGMM NQG   GDFDRLRHRSPSPMASSNLMSNVS +GL +WN
Sbjct:  61 VSGMMSNQG--FGDFDRLRHRSPSPMASSNLMSNVSGTGLGSWN 102

>gi|224069102|ref|XP_002326275.1| predicted protein [Populus trichocarpa]

          Length = 281

 Score =  157 bits (396), Expect = 3e-036
 Identities = 82/104 (78%), Positives = 89/104 (85%), Gaps = 6/104 (5%)
 Frame = +2

Query: 137 YNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFR 316
           YN N   FSPARAASPQIRSTP++D SQYL+ELL EHQKL PFMQVLP CSRLLNQE+FR
Sbjct:   5 YNPN---FSPARAASPQIRSTPDVD-SQYLSELLAEHQKLGPFMQVLPTCSRLLNQEIFR 60

Query: 317 VSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           VSGMM NQG   GDFDRLRHRSPSPMASSNL+SNV  +GL+ WN
Sbjct:  61 VSGMMSNQG--FGDFDRLRHRSPSPMASSNLLSNVGGTGLSGWN 102

>gi|224140633|ref|XP_002323686.1| predicted protein [Populus trichocarpa]

          Length = 281

 Score =  157 bits (395), Expect = 4e-036
 Identities = 79/97 (81%), Positives = 86/97 (88%), Gaps = 3/97 (3%)
 Frame = +2

Query: 158 FSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFRVSGMMPN 337
           FSPARAASPQIRSTP++D SQYL+ELL EHQKL PFMQ+LPICSRLLNQE+FRVSGMM N
Sbjct:   9 FSPARAASPQIRSTPDVD-SQYLSELLAEHQKLGPFMQILPICSRLLNQEIFRVSGMMSN 67

Query: 338 QGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           QG   GDFDRLRHRSPSPMASSNL+SNV  +GL  WN
Sbjct:  68 QG--FGDFDRLRHRSPSPMASSNLISNVGGTGLGGWN 102

>gi|225439096|ref|XP_002268790.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 281

 Score =  156 bits (392), Expect = 9e-036
 Identities = 81/104 (77%), Positives = 89/104 (85%), Gaps = 6/104 (5%)
 Frame = +2

Query: 137 YNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFR 316
           YN+N   FSPARA SPQIRSTP++D SQYL+ELL EHQKL PFMQVLPICSRLLNQE+ R
Sbjct:   5 YNHN---FSPARAVSPQIRSTPDVD-SQYLSELLAEHQKLGPFMQVLPICSRLLNQEIIR 60

Query: 317 VSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           VSGM+ NQG   GDFDRL+HRSPSPMASSNLMSNVS +GL  WN
Sbjct:  61 VSGMISNQG--FGDFDRLQHRSPSPMASSNLMSNVSGTGLGGWN 102

>gi|255647494|gb|ACU24211.1| unknown [Glycine max]

          Length = 281

 Score =  156 bits (392), Expect = 9e-036
 Identities = 82/104 (78%), Positives = 88/104 (84%), Gaps = 6/104 (5%)
 Frame = +2

Query: 137 YNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFR 316
           YN N   FSPARAASPQIRS PE+D S+YL+ELL EHQKL PFMQVLPICSRLLNQE+ R
Sbjct:   5 YNPN---FSPARAASPQIRSNPEVD-SRYLSELLAEHQKLGPFMQVLPICSRLLNQEILR 60

Query: 317 VSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           VSGM+ NQG   GDFDRLRHRSPSPMASSNLMSNVS +GL  WN
Sbjct:  61 VSGMLSNQG--FGDFDRLRHRSPSPMASSNLMSNVSGTGLGGWN 102

>gi|12322716|gb|AAG51340.1|AC012562_1 unknown protein; 28504-31237 [Arabidopsis
        thaliana]

          Length = 319

 Score =  154 bits (388), Expect = 2e-035
 Identities = 79/108 (73%), Positives = 88/108 (81%), Gaps = 4/108 (3%)
 Frame = +2

Query: 125 MSGLYNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQ 304
           MSGLYN N+  FSP+RAASPQIR+      SQY+++LL EHQKL PFMQVLPICSRLLNQ
Sbjct:  37 MSGLYNYNN--FSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQ 94

Query: 305 EMFRVSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           E+FR++GMMPNQG    DFDRLRHRSPSPMAS NLMSNVS  GL  WN
Sbjct:  95 EIFRITGMMPNQG--FTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWN 140

>gi|255637373|gb|ACU19015.1| unknown [Glycine max]

          Length = 281

 Score =  151 bits (381), Expect = 2e-034
 Identities = 78/104 (75%), Positives = 87/104 (83%), Gaps = 6/104 (5%)
 Frame = +2

Query: 137 YNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFR 316
           YN+N   FSP RAASPQIR+ PE+D SQYLTELL EHQKL PFMQ LPICSRLLNQE+ R
Sbjct:   5 YNSN---FSPVRAASPQIRTNPEVD-SQYLTELLAEHQKLGPFMQALPICSRLLNQEILR 60

Query: 317 VSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           VSGM+ NQG   GDFDRLRH+SPSPMASSNLMS+V+ +GL  WN
Sbjct:  61 VSGMLSNQG--FGDFDRLRHKSPSPMASSNLMSSVTGTGLGGWN 102

>gi|255637478|gb|ACU19066.1| unknown [Glycine max]

          Length = 281

 Score =  151 bits (380), Expect = 2e-034
 Identities = 78/104 (75%), Positives = 86/104 (82%), Gaps = 6/104 (5%)
 Frame = +2

Query: 137 YNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFR 316
           YN+N   FSP RAASPQIR+ PE+D SQYLTELL EHQK  PFMQ LPICSRLLNQE+ R
Sbjct:   5 YNSN---FSPVRAASPQIRTNPEVD-SQYLTELLAEHQKFGPFMQALPICSRLLNQEILR 60

Query: 317 VSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           VSGM+ NQG   GDFDRLRHRSPSPMASSNLMS+V+ +GL  WN
Sbjct:  61 VSGMLSNQG--FGDFDRLRHRSPSPMASSNLMSSVTGTGLGGWN 102

>gi|30680583|ref|NP_187474.2| RNA-binding KH domain-containing protein
        [Arabidopsis thaliana]

          Length = 283

 Score =  151 bits (379), Expect = 3e-034
 Identities = 77/106 (72%), Positives = 86/106 (81%), Gaps = 4/106 (3%)
 Frame = +2

Query: 131 GLYNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEM 310
           GLYN N+  FSP+RAASPQIR+      SQY+++LL EHQKL PFMQVLPICSRLLNQE+
Sbjct:   3 GLYNYNN--FSPSRAASPQIRTPSSDVDSQYISQLLAEHQKLGPFMQVLPICSRLLNQEI 60

Query: 311 FRVSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           FR++GMMPNQG    DFDRLRHRSPSPMAS NLMSNVS  GL  WN
Sbjct:  61 FRITGMMPNQG--FTDFDRLRHRSPSPMASPNLMSNVSGGGLGGWN 104

>gi|40645104|dbj|BAD06470.1| hypothetical protein [Nicotiana tabacum]

          Length = 285

 Score =  148 bits (373), Expect = 1e-033
 Identities = 76/109 (69%), Positives = 90/109 (82%), Gaps = 4/109 (3%)
 Frame = +2

Query: 125 MSGLYNNNSSYFSPARAASPQIRST-PEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLN 301
           MSGLYNNN + FSP+RAASPQIRS+ P++DS+QYL+ELL EHQK+ PFMQVLPICS LLN
Sbjct:   1 MSGLYNNNHN-FSPSRAASPQIRSSNPDVDSNQYLSELLAEHQKVGPFMQVLPICSTLLN 59

Query: 302 QEMFRVSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           QE+ RVSGM PNQ    G+ DR RHRS SPMAS+N+MSNV  +GL  W+
Sbjct:  60 QEILRVSGMTPNQ--ILGELDRFRHRSSSPMASANVMSNVGGTGLGGWS 106

>gi|297829386|ref|XP_002882575.1| KH domain-containing protein [Arabidopsis
        lyrata subsp. lyrata]

          Length = 282

 Score =  146 bits (368), Expect = 5e-033
 Identities = 75/105 (71%), Positives = 84/105 (80%), Gaps = 5/105 (4%)
 Frame = +2

Query: 134 LYNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMF 313
           LYN N   FSP+RAASPQIR+T     SQYL++LL EHQKL PFMQVLPICSRLLNQE+F
Sbjct:   4 LYNYN---FSPSRAASPQIRTTSSDVDSQYLSQLLAEHQKLGPFMQVLPICSRLLNQEIF 60

Query: 314 RVSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           R++GM+PNQG    DFDRLRHRSPSPMAS NLMSN   +GL  WN
Sbjct:  61 RITGMLPNQG--FTDFDRLRHRSPSPMASPNLMSNAPGAGLGGWN 103

>gi|255585282|ref|XP_002533340.1| nucleic acid binding protein, putative
        [Ricinus communis]

          Length = 274

 Score =  128 bits (321), Expect = 1e-027
 Identities = 64/97 (65%), Positives = 76/97 (78%), Gaps = 2/97 (2%)
 Frame = +2

Query: 158 FSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFRVSGMMPN 337
           FSPARA SP IR+TP++DS QYLTELL EHQKL PF QVLPICSRLLNQE+ RVSGM+PN
Sbjct:   2 FSPARALSPHIRTTPDVDSGQYLTELLEEHQKLGPFNQVLPICSRLLNQEILRVSGMIPN 61

Query: 338 QGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           QG    DFDRL+  S SPMASS ++++   + +  WN
Sbjct:  62 QG--FSDFDRLQRGSLSPMASSEILASNRGTSIMGWN 96

>gi|147766029|emb|CAN61397.1| hypothetical protein VITISV_015779 [Vitis
        vinifera]

          Length = 281

 Score =  126 bits (314), Expect = 9e-027
 Identities = 62/97 (63%), Positives = 75/97 (77%), Gaps = 3/97 (3%)
 Frame = +2

Query: 158 FSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFRVSGMMPN 337
           FS ARA SP IR+ P+++ SQYLTELL E+QKL PFMQVLP+CSRLLNQE+ RVSGM+P 
Sbjct:   9 FSSARALSPHIRTAPDVE-SQYLTELLAEYQKLVPFMQVLPVCSRLLNQEILRVSGMIPK 67

Query: 338 QGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           QG   GDFDRL+  SPSP+ SS +M N+  + L  WN
Sbjct:  68 QG--FGDFDRLQRGSPSPLGSSEMMPNIRGTSLGGWN 102

>gi|115471235|ref|NP_001059216.1| Os07g0227400 [Oryza sativa Japonica Group]

          Length = 286

 Score =  124 bits (310), Expect = 3e-026
 Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 5/106 (4%)
 Frame = +2

Query: 131 GLYNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEM 310
           GLYN+    FSPAR  SPQIRS PE D SQYL+ELL EH KL PFMQVLPICSRLLNQE+
Sbjct:   4 GLYNHQG--FSPARTLSPQIRSNPEAD-SQYLSELLAEHHKLGPFMQVLPICSRLLNQEI 60

Query: 311 FRVSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
            RVS M+ N  GF  DFDR R+RSPSPM+S  +  N+  +G   WN
Sbjct:  61 MRVSSMV-NDHGF-NDFDRRRYRSPSPMSSPIMRPNLHGNGFGPWN 104

>gi|125599596|gb|EAZ39172.1| hypothetical protein OsJ_23597 [Oryza sativa
        Japonica Group]

          Length = 299

 Score =  124 bits (310), Expect = 3e-026
 Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 5/106 (4%)
 Frame = +2

Query: 131 GLYNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEM 310
           GLYN+    FSPAR  SPQIRS PE D SQYL+ELL EH KL PFMQVLPICSRLLNQE+
Sbjct:   4 GLYNHQG--FSPARTLSPQIRSNPEAD-SQYLSELLAEHHKLGPFMQVLPICSRLLNQEI 60

Query: 311 FRVSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
            RVS M+ N  GF  DFDR R+RSPSPM+S  +  N+  +G   WN
Sbjct:  61 MRVSSMV-NDHGF-NDFDRRRYRSPSPMSSPIMRPNLHGNGFGPWN 104

>gi|225434301|ref|XP_002264308.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 281

 Score =  123 bits (308), Expect = 5e-026
 Identities = 61/97 (62%), Positives = 74/97 (76%), Gaps = 3/97 (3%)
 Frame = +2

Query: 158 FSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFRVSGMMPN 337
           FS ARA SP IR+ P+++ SQYLTELL E+QKL PFMQVLP+CSRLLNQE+ RVS M+P 
Sbjct:   9 FSSARALSPHIRTAPDVE-SQYLTELLAEYQKLVPFMQVLPVCSRLLNQEILRVSSMIPK 67

Query: 338 QGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           QG   GDFDRL+  SPSP+ SS +M N+  + L  WN
Sbjct:  68 QG--FGDFDRLQRGSPSPLGSSEMMPNIRGTSLGGWN 102

>gi|115456169|ref|NP_001051685.1| Os03g0815700 [Oryza sativa Japonica Group]

          Length = 281

 Score =  120 bits (299), Expect = 5e-025
 Identities = 63/97 (64%), Positives = 71/97 (73%), Gaps = 2/97 (2%)
 Frame = +2

Query: 158 FSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFRVSGMMPN 337
           FSPAR  SPQIRS P    SQYL ELL EHQKL PFMQVLPICS+LL+QE+ RVS ++ N
Sbjct:   9 FSPARNLSPQIRSNPTDVDSQYLAELLAEHQKLGPFMQVLPICSKLLSQEIMRVSSIVHN 68

Query: 338 QGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
            G   GDFDR R RSPSPM+S N  SN S +G + WN
Sbjct:  69 HG--FGDFDRHRFRSPSPMSSPNPRSNRSGNGFSPWN 103

>gi|224145398|ref|XP_002325628.1| predicted protein [Populus trichocarpa]

          Length = 280

 Score =  119 bits (297), Expect = 9e-025
 Identities = 62/97 (63%), Positives = 72/97 (74%), Gaps = 3/97 (3%)
 Frame = +2

Query: 158 FSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEMFRVSGMMPN 337
           FSP R ASP +R TP++DS QYLTELL E QKL PFMQVLPICSRLLNQE+ RVSG  PN
Sbjct:   9 FSPVR-ASPHVRITPDVDSGQYLTELLEERQKLGPFMQVLPICSRLLNQEILRVSGRTPN 67

Query: 338 QGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
           QG   GD DRL++ S SPMAS +++ N   +G   WN
Sbjct:  68 QG--FGDLDRLQYGSLSPMASLDIIPNTIGAGFNGWN 102

>gi|326514498|dbj|BAJ96236.1| predicted protein [Hordeum vulgare subsp.
        vulgare]

          Length = 282

 Score =  117 bits (293), Expect = 3e-024
 Identities = 63/106 (59%), Positives = 72/106 (67%), Gaps = 4/106 (3%)
 Frame = +2

Query: 131 GLYNNNSSYFSPARAASPQIRSTPEIDSSQYLTELLVEHQKLTPFMQVLPICSRLLNQEM 310
           GLY      FSP+R  SPQIRS P++  SQYL ELL EH+KL PFMQVLPICSRLL  E+
Sbjct:   3 GLYGQQG--FSPSRNLSPQIRSNPDVVDSQYLAELLAEHEKLGPFMQVLPICSRLLVHEI 60

Query: 311 FRVSGMMPNQGGFGGDFDRLRHRSPSPMASSNLMSNVSNSGLAAWN 448
            RVS    N G    DFDR R RSPSPM+S N  SN+S +G + WN
Sbjct:  61 MRVSNSSHNPG--FSDFDRHRFRSPSPMSSPNPRSNLSGNGFSPWN 104

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 359,848,489,672
Number of Sequences: 15229318
Number of Extensions: 359848489672
Number of Successful Extensions: 91916522
Number of sequences better than 0.0: 0