BLASTX 7.6.2
Query= UN03216 /QuerySize=1606
(1605 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FV53|DEF1A_ARATH Peptide deformylase 1A, chloroplastic OS=A... 429 3e-119
sp|Q9FUZ0|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic OS=S... 315 5e-085
sp|B6RGY0|DEF1A_ORYSJ Peptide deformylase 1A, chloroplastic OS=O... 285 6e-076
sp|Q9XI29|Y1540_ARATH Uncharacterized protein At1g15400 OS=Arabi... 205 1e-051
sp|Q7NJV3|DEF1_GLOVI Peptide deformylase 1 OS=Gloeobacter violac... 152 1e-035
sp|Q9HBH1|DEFM_HUMAN Peptide deformylase, mitochondrial OS=Homo ... 138 2e-031
sp|Q825U9|DEF3_STRAW Peptide deformylase 3 OS=Streptomyces averm... 133 4e-030
sp|Q9RD27|DEF1_STRCO Peptide deformylase 1 OS=Streptomyces coeli... 131 1e-029
sp|Q8G534|DEF1_BIFLO Peptide deformylase 1 OS=Bifidobacterium lo... 119 1e-025
sp|A1A2Z1|DEF_BIFAA Peptide deformylase OS=Bifidobacterium adole... 114 3e-024
sp|B3CTU1|DEF_ORITI Peptide deformylase OS=Orientia tsutsugamush... 101 3e-020
sp|A5CF65|DEF_ORITB Peptide deformylase OS=Orientia tsutsugamush... 98 1e-019
sp|Q8XZJ6|DEF2_RALSO Peptide deformylase 2 OS=Ralstonia solanace... 74 2e-012
sp|Q7W0Q0|DEF1_BORPE Peptide deformylase 1 OS=Bordetella pertuss... 74 3e-012
sp|Q7W4K0|DEF2_BORPA Peptide deformylase 2 OS=Bordetella paraper... 74 3e-012
sp|Q7WG25|DEF2_BORBR Peptide deformylase 2 OS=Bordetella bronchi... 74 4e-012
sp|Q826Q0|DEF2_STRAW Peptide deformylase 2 OS=Streptomyces averm... 70 4e-011
sp|Q9FCA2|DEF2_STRCO Peptide deformylase 2 OS=Streptomyces coeli... 69 7e-011
sp|B1XJP0|DEF_SYNP2 Peptide deformylase OS=Synechococcus sp. (st... 69 1e-010
sp|Q88B43|DEF1_PSESM Peptide deformylase 1 OS=Pseudomonas syring... 67 3e-010
>sp|Q9FV53|DEF1A_ARATH Peptide deformylase 1A, chloroplastic OS=Arabidopsis
thaliana GN=PDF1A PE=1 SV=2
Length = 259
Score = 429 bits (1102), Expect = 3e-119
Identities = 218/264 (82%), Positives = 238/264 (90%), Gaps = 5/264 (1%)
Frame = +3
Query: 42 METLFRFSLRLLPVSAAVTRRAIHFPVSRPSPSHFLNRSSSSLYKFSSSSSSVKTNAGWL 221
METLFR SLRLLPVSAAVT R+I FPVSRP SH LNR +L +SSSSS+ T AGWL
Sbjct: 1 METLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNLP--TSSSSSLSTKAGWL 58
Query: 222 LGLGDNKKKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERVQRIIDDMVKVMRLAPGV 401
LGLG+ KKK+ +LP+IVA+GDPVLHEKAREVDP EIGSER+Q+IIDDM+KVMRLAPGV
Sbjct: 59 LGLGE---KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGV 115
Query: 402 GLAAPQIGIPLRIIVLEDTKEYISYAPKEEVLAQQRRPFDLMVMVNPELKGVSNKKALFF 581
GLAAPQIG+PLRIIVLEDTKEYISYAPKEE+LAQ+RR FDLMVMVNP LK SNKKALFF
Sbjct: 116 GLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFF 175
Query: 582 *GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARILQHECDHLDGNLYVDKMI 761
GCLSVDGFRA VERYLEV VTGYDRQG+RI+VNASGWQARILQHECDHLDGNLYVDKM+
Sbjct: 176 EGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMV 235
Query: 762 PRTFRTVDNLDLPLADGCPKLGPR 833
PRTFRTVDNLDLPLA+GCPKLGP+
Sbjct: 236 PRTFRTVDNLDLPLAEGCPKLGPQ 259
>sp|Q9FUZ0|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic OS=Solanum
lycopersicum GN=PDF1A PE=2 SV=1
Length = 277
Score = 315 bits (807), Expect = 5e-085
Identities = 157/212 (74%), Positives = 179/212 (84%), Gaps = 4/212 (1%)
Frame = +3
Query: 192 SSVKTNAGWLLGLGDNKKKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERVQRIIDDM 371
SS AGW LGLG+ KK+ +PDIV AGDPVLHE ++++ EEIGSER+Q+II++M
Sbjct: 68 SSATARAGWFLGLGEKKKQA----MPDIVKAGDPVLHEPSQDIPLEEIGSERIQKIIEEM 123
Query: 372 VKVMRLAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEVLAQQRRPFDLMVMVNPELK 551
VKVMR APGVGLAAPQIGIPL+IIVLEDT EYISYAPK+E AQ RRPF L+V++NP+LK
Sbjct: 124 VKVMRNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQDRRPFGLLVIINPKLK 183
Query: 552 GVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARILQHECDHL 731
NK ALFF GCLSVDGFRAVVER+LEVEVTG DR G+ I+V+ASGWQARILQHE DHL
Sbjct: 184 KKGNKTALFFEGCLSVDGFRAVVERHLEVEVTGLDRNGKAIKVDASGWQARILQHEYDHL 243
Query: 732 DGNLYVDKMIPRTFRTVDNLDLPLADGCPKLG 827
DG LYVDKM PRTFRTV+NLDLPLA GCPKLG
Sbjct: 244 DGTLYVDKMAPRTFRTVENLDLPLAAGCPKLG 275
>sp|B6RGY0|DEF1A_ORYSJ Peptide deformylase 1A, chloroplastic OS=Oryza sativa
subsp. japonica GN=PDF1A PE=2 SV=1
Length = 260
Score = 285 bits (729), Expect = 6e-076
Identities = 145/221 (65%), Positives = 172/221 (77%), Gaps = 7/221 (3%)
Frame = +3
Query: 192 SSVKTNA---GWLLGL----GDNKKKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERV 350
SSV+ +A GWL GL G T P V AGDPVLHE A++V P +I SE+V
Sbjct: 40 SSVRASAGGGGWLSGLLGGKGGGGAPTAMTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKV 99
Query: 351 QRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEVLAQQRRPFDLMV 530
Q +ID MV VMR APGVGLAAPQIG+PL+IIVLEDT+EYISYAPK+++ AQ RRPFDL+V
Sbjct: 100 QGVIDRMVAVMRKAPGVGLAAPQIGVPLKIIVLEDTQEYISYAPKKDIEAQDRRPFDLLV 159
Query: 531 MVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARIL 710
++NP+LK S + ALFF GCLSVDG+RA+VER+L+VEV+G DR G I+V ASGWQARIL
Sbjct: 160 IINPKLKTTSKRTALFFEGCLSVDGYRALVERHLDVEVSGLDRNGRPIKVEASGWQARIL 219
Query: 711 QHECDHLDGNLYVDKMIPRTFRTVDNLDLPLADGCPKLGPR 833
QHECDHL+G LYVD M+PRTFR VDNLDLPL GCP +G R
Sbjct: 220 QHECDHLEGTLYVDTMVPRTFRIVDNLDLPLPVGCPPIGAR 260
>sp|Q9XI29|Y1540_ARATH Uncharacterized protein At1g15400 OS=Arabidopsis thaliana
GN=At1g15400 PE=1 SV=2
Length = 148
Score = 205 bits (519), Expect = 1e-051
Identities = 106/148 (71%), Positives = 122/148 (82%), Gaps = 11/148 (7%)
Frame = -2
Query: 1538 MEGLQRSTISFRRQGSSGIVWDDRVIAELNKQATEQREEQSQRNEQQPKPLSETSEQAKQ 1359
MEGLQRSTISFRRQGSSGIV+DDR+IAELNK +++++SQR+E QPKP+SE+SEQ K
Sbjct: 1 MEGLQRSTISFRRQGSSGIVFDDRLIAELNKSGNNEQKDESQRDE-QPKPMSESSEQVKP 59
Query: 1358 NPNGDEKENLRPIKTGGPT---IERSRSNNGGGGGGPRHHHRTTGRVSPAVEPPSPILST 1188
DEK+ LRPIKTGG IERSRSN GGG + HHRTTGRVSPAV+PPSP +S+
Sbjct: 60 I---DEKDKLRPIKTGGGAPGGIERSRSN----GGGAQRHHRTTGRVSPAVDPPSPRISS 112
Query: 1187 CGCCSAFGKKPPGKKNNPRQRPPKRRSR 1104
CGCCSAFGK PPGKK NPR+RPPKRRSR
Sbjct: 113 CGCCSAFGKNPPGKKVNPRKRPPKRRSR 140
>sp|Q7NJV3|DEF1_GLOVI Peptide deformylase 1 OS=Gloeobacter violaceus GN=def1
PE=3 SV=1
Length = 227
Score = 152 bits (382), Expect = 1e-035
Identities = 77/175 (44%), Positives = 111/175 (63%)
Frame = +3
Query: 270 DIVAAGDPVLHEKAREVDPEEIGSERVQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVL 449
+IV GDPVL A+ ++ +EI SE +Q++I M + MR APGVGLAAPQ+G+ ++++V+
Sbjct: 47 EIVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQLVVI 106
Query: 450 EDTKEYISYAPKEEVLAQQRRPFDLMVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERY 629
ED EYI E ++R P V++NP L + A+FF GCLS+ G++ +V R
Sbjct: 107 EDRPEYIERLSGAERREREREPVPFHVLINPVLSVEGEESAVFFEGCLSIPGYQGLVARA 166
Query: 630 LEVEVTGYDRQGERIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRTVDNLD 794
V V D + + + A GW ARILQHE DHL+G L VD+M +TF T++N D
Sbjct: 167 RVVRVEALDERAAPVVIRAHGWYARILQHEIDHLNGLLCVDRMDLQTFSTLENYD 221
>sp|Q9HBH1|DEFM_HUMAN Peptide deformylase, mitochondrial OS=Homo sapiens GN=PDF
PE=1 SV=1
Length = 243
Score = 138 bits (345), Expect = 2e-031
Identities = 71/170 (41%), Positives = 101/170 (59%)
Frame = +3
Query: 273 IVAAGDPVLHEKAREVDPEEIGSERVQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLE 452
+ GDPVL A V+ ++G +QR+ +V+VMR VGL+APQ+G+P +++ LE
Sbjct: 67 VCQVGDPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQVLALE 126
Query: 453 DTKEYISYAPKEEVLAQQRRPFDLMVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYL 632
+ P + +Q PF L V VNP L+ + ++ F GC SV GF A V R+
Sbjct: 127 LPEALCRECPPRQRALRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQ 186
Query: 633 EVEVTGYDRQGERIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRTV 782
V+++G D GE++ ASGW ARI+QHE DHL G L++DKM RTF V
Sbjct: 187 AVQISGLDPNGEQVVWQASGWAARIIQHEMDHLQGCLFIDKMDSRTFTNV 236
>sp|Q825U9|DEF3_STRAW Peptide deformylase 3 OS=Streptomyces avermitilis GN=def3
PE=3 SV=1
Length = 224
Score = 133 bits (334), Expect = 4e-030
Identities = 76/183 (41%), Positives = 106/183 (57%), Gaps = 5/183 (2%)
Frame = +3
Query: 273 IVAAGDPVLHEKAREVDPEEIGSERVQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLE 452
IVAAGDPVL A D ++G + R ++ + M APGVGLAAPQ+G+ LRI V+E
Sbjct: 35 IVAAGDPVLRRGAEPYD-GQLGPGLLARFVEALRLTMHAAPGVGLAAPQVGVGLRIAVIE 93
Query: 453 DTKEYISYAPKEEVLAQQRRPFDLMVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYL 632
D + P+E + R P V+VNP + V + +A FF GCLSV G++AVV R
Sbjct: 94 DP----APVPEEVGAVRGRVPQPFRVLVNPSYEAVGSDRAAFFEGCLSVPGWQAVVARPA 149
Query: 633 EVEVTGYDRQGERIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRTVDNLDLPLADG 812
V +T D G + +GW ARI+QHE DHLDG LY+D+ R+ + + + L +
Sbjct: 150 RVRLTALDEHGRAVDEEFTGWPARIVQHETDHLDGMLYLDRAELRSLSSNEAMALRWSQP 209
Query: 813 CPK 821
P+
Sbjct: 210 TPE 212
>sp|Q9RD27|DEF1_STRCO Peptide deformylase 1 OS=Streptomyces coelicolor GN=def1
PE=3 SV=1
Length = 218
Score = 131 bits (329), Expect = 1e-029
Identities = 71/161 (44%), Positives = 97/161 (60%), Gaps = 5/161 (3%)
Frame = +3
Query: 273 IVAAGDPVLHEKAREVDPEEIGSERVQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLE 452
IVAAGDPVL A D ++ +R ++ + M APGVGLAAPQ+G+ LR+ V+E
Sbjct: 26 IVAAGDPVLRRAAEPYD-GQVAPALFERFVEALRLTMHAAPGVGLAAPQVGVGLRVAVIE 84
Query: 453 DTKEYISYAPKEEVLAQQRRPFDLMVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYL 632
D + P E +A+ R P V+VNP + +A FF GCLSV G++AVV R+
Sbjct: 85 DP----APVPDEVRVARGRVPQPFRVLVNPSYEPAGAGRAAFFEGCLSVPGWQAVVARHA 140
Query: 633 EVEVTGYDRQGERIQVNASGWQARILQHECDHLDGNLYVDK 755
EV + +D G + +GW ARI+QHE DHLDG LY+D+
Sbjct: 141 EVRLRAHDEHGRAVDEVFAGWPARIVQHETDHLDGTLYLDR 181
>sp|Q8G534|DEF1_BIFLO Peptide deformylase 1 OS=Bifidobacterium longum GN=def1
PE=3 SV=1
Length = 217
Score = 119 bits (296), Expect = 1e-025
Identities = 70/181 (38%), Positives = 103/181 (56%), Gaps = 8/181 (4%)
Frame = +3
Query: 252 KQTNLPDIVAAGDPVLHEKAREVDPEEIGSERVQRIIDDMVKVMRLAPGVGLAAPQIGIP 431
K+ LP IV AG+PVL ++ + ++ + ++ID M M APGVGLAA QIG+
Sbjct: 25 KEKLLP-IVQAGEPVLRQRTVAYN-GQLSKRTLAKLIDTMHTTMLEAPGVGLAATQIGLG 82
Query: 432 LRIIVLEDTKEYISYAPKEEVLAQQRRPFDLMVMVNPELKGVSNKKALFF*GCLSVDGFR 611
L + V+ED + +E ++ F V++NP K S+K A F+ GCLS DG++
Sbjct: 83 LALAVVED------HVRDDEDDPREIAEFPFHVIINPSYKPTSDKTASFYEGCLSFDGYQ 136
Query: 612 AVVERYLEVEVTGYDRQGERIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRTVDNL 791
AV +R+L++ D G+ GW ARI QHE DHL G LY+D+ R+ T +NL
Sbjct: 137 AVRKRWLDITAEWDDEDGKHHSEPLHGWPARIFQHETDHLSGELYIDRAEIRSLTTNENL 196
Query: 792 D 794
+
Sbjct: 197 E 197
>sp|A1A2Z1|DEF_BIFAA Peptide deformylase OS=Bifidobacterium adolescentis (strain
ATCC 15703 / DSM 20083) GN=def PE=3 SV=1
Length = 218
Score = 114 bits (283), Expect = 3e-024
Identities = 62/174 (35%), Positives = 98/174 (56%), Gaps = 6/174 (3%)
Frame = +3
Query: 273 IVAAGDPVLHEKAREVDPEEIGSERVQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLE 452
IV AG+PVL ++ D ++ + + ++ID M M APGVGLAA QIG+ L + V+E
Sbjct: 31 IVQAGEPVLRQQTIAYD-GQLSRKTLDKLIDTMRTTMLEAPGVGLAATQIGLGLALAVVE 89
Query: 453 DTKEYISYAPKEEVLAQQRRPFDLMVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYL 632
D ++ ++ F ++NP + + + F+ GCLS DG++AV +R+L
Sbjct: 90 D-----HVCEGDDGDPREAAEFPFHAIINPSYEPIGTETRSFYEGCLSFDGYQAVRKRWL 144
Query: 633 EVEVTGYDRQGERIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRTVDNLD 794
++ D G + + + GW ARI QHE DHL G LY+D+ R+ T +NL+
Sbjct: 145 DITARWQDEDGNKHEEHLHGWPARIFQHETDHLSGELYIDQAEIRSLTTNENLE 198
>sp|B3CTU1|DEF_ORITI Peptide deformylase OS=Orientia tsutsugamushi (strain
Ikeda) GN=def PE=3 SV=1
Length = 181
Score = 101 bits (249), Expect = 3e-020
Identities = 59/143 (41%), Positives = 85/143 (59%), Gaps = 5/143 (3%)
Frame = +3
Query: 324 PEEIGSERVQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEVLAQ 503
P + ++ +++++DDM++ M GVGLAAPQ+ + RIIVL+ +K I KE+ +
Sbjct: 20 PVDTVNDSIRQLMDDMLETMYHNHGVGLAAPQVAVSKRIIVLDLSKVDI----KEDNITN 75
Query: 504 QRRPFDLMVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVN 683
+ L MVNP +K +SN+ A GCLS+ V RY E++VT D + +N
Sbjct: 76 SEYKYPLF-MVNPIVKAISNQTATAKEGCLSLPKQAIEVSRYHEIQVTYLDYYNKLTTLN 134
Query: 684 ASGWQARILQHECDHLDGNLYVD 752
A GW AR +QHE DHLDG L VD
Sbjct: 135 AEGWLARAIQHEVDHLDGILLVD 157
>sp|A5CF65|DEF_ORITB Peptide deformylase OS=Orientia tsutsugamushi (strain
Boryong) GN=def PE=3 SV=1
Length = 181
Score = 98 bits (243), Expect = 1e-019
Identities = 58/143 (40%), Positives = 85/143 (59%), Gaps = 5/143 (3%)
Frame = +3
Query: 324 PEEIGSERVQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLEDTKEYISYAPKEEVLAQ 503
P + ++ ++++IDDM++ M GVGLAAPQ+ + RIIVL+ +K I +E+ +
Sbjct: 20 PVDTVNDSIRQLIDDMLETMYHNHGVGLAAPQVAVSKRIIVLDLSKVDI----EEDNITN 75
Query: 504 QRRPFDLMVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVN 683
+ L MVNP +K +SN+ GCLS+ V RY E++VT D + +N
Sbjct: 76 SEYKYPLF-MVNPIVKAISNQTVTAKEGCLSLPKQAIEVSRYHEIQVTYLDYYNKLKTLN 134
Query: 684 ASGWQARILQHECDHLDGNLYVD 752
A+GW AR +QHE DHLDG L VD
Sbjct: 135 AAGWLARAIQHEVDHLDGILLVD 157
>sp|Q8XZJ6|DEF2_RALSO Peptide deformylase 2 OS=Ralstonia solanacearum GN=def2
PE=3 SV=1
Length = 177
Score = 74 bits (181), Expect = 2e-012
Identities = 35/73 (47%), Positives = 47/73 (64%)
Frame = +3
Query: 528 VMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARI 707
V++NP ++ +S+ + GCLSV G R VV RY + TGYD+ G I A G+ AR+
Sbjct: 79 VLINPTIEPLSDAMEDGWEGCLSVPGLRGVVPRYTRLRYTGYDQHGHAIDRIAEGFHARV 138
Query: 708 LQHECDHLDGNLY 746
+QHECDHL G LY
Sbjct: 139 VQHECDHLQGILY 151
>sp|Q7W0Q0|DEF1_BORPE Peptide deformylase 1 OS=Bordetella pertussis GN=def1 PE=3
SV=1
Length = 176
Score = 74 bits (180), Expect = 3e-012
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +3
Query: 528 VMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARI 707
++ NP ++ +S++ + GCLSV G R +V RY + +GYD G+RI+ A G+ AR+
Sbjct: 79 ILCNPVIEPLSDEMEDGWEGCLSVPGLRGLVPRYRHIRYSGYDPAGQRIEREAEGFHARV 138
Query: 708 LQHECDHLDGNLY 746
+QHECDHL G LY
Sbjct: 139 VQHECDHLIGRLY 151
>sp|Q7W4K0|DEF2_BORPA Peptide deformylase 2 OS=Bordetella parapertussis GN=def2
PE=3 SV=1
Length = 176
Score = 74 bits (180), Expect = 3e-012
Identities = 33/73 (45%), Positives = 49/73 (67%)
Frame = +3
Query: 528 VMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARI 707
++ NP ++ +S++ + GCLSV G R +V RY + +GYD G+RI+ A G+ AR+
Sbjct: 79 ILCNPVIEPLSDEMEDGWEGCLSVPGLRGLVPRYRHIRYSGYDPAGQRIEREAEGFHARV 138
Query: 708 LQHECDHLDGNLY 746
+QHECDHL G LY
Sbjct: 139 VQHECDHLIGRLY 151
>sp|Q7WG25|DEF2_BORBR Peptide deformylase 2 OS=Bordetella bronchiseptica GN=def2
PE=3 SV=1
Length = 176
Score = 74 bits (179), Expect = 4e-012
Identities = 33/73 (45%), Positives = 48/73 (65%)
Frame = +3
Query: 528 VMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARI 707
++ NP ++ +S + + GCLSV G R +V RY + +GYD G+RI+ A G+ AR+
Sbjct: 79 ILCNPVIEPLSGEMEDGWEGCLSVPGLRGLVPRYRHIRYSGYDPAGQRIEREAEGFHARV 138
Query: 708 LQHECDHLDGNLY 746
+QHECDHL G LY
Sbjct: 139 VQHECDHLIGRLY 151
>sp|Q826Q0|DEF2_STRAW Peptide deformylase 2 OS=Streptomyces avermitilis GN=def2
PE=3 SV=1
Length = 186
Score = 70 bits (170), Expect = 4e-011
Identities = 31/58 (53%), Positives = 39/58 (67%)
Frame = +3
Query: 585 GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARILQHECDHLDGNLYVDKM 758
GCLS+ G A ERY V G+ GE ++V +GW AR LQHECDHLDG +YVD++
Sbjct: 103 GCLSLPGLEAGTERYDRAVVEGFTTDGEPVRVLGTGWFARCLQHECDHLDGGVYVDRV 160
>sp|Q9FCA2|DEF2_STRCO Peptide deformylase 2 OS=Streptomyces coelicolor GN=def2
PE=3 SV=2
Length = 179
Score = 69 bits (168), Expect = 7e-011
Identities = 36/82 (43%), Positives = 46/82 (56%)
Frame = +3
Query: 531 MVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARIL 710
+VNP L GCLS+ G A ERY E VTG+ GE + V +G+ AR L
Sbjct: 85 VVNPRLVETGGVVVRGPEGCLSLPGLEAGTERYDEAVVTGFTVAGEPVTVRGTGFFARCL 144
Query: 711 QHECDHLDGNLYVDKMIPRTFR 776
QHECDHL+G +Y D++ R R
Sbjct: 145 QHECDHLEGRVYADRLTGRRHR 166
>sp|B1XJP0|DEF_SYNP2 Peptide deformylase OS=Synechococcus sp. (strain ATCC 27264
/ PCC 7002 / PR-6) GN=def PE=3 SV=1
Length = 187
Score = 69 bits (166), Expect = 1e-010
Identities = 33/78 (42%), Positives = 51/78 (65%)
Frame = +3
Query: 525 MVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQAR 704
+V++NPE+K + F GCLS+ G V R E+EV+ D QG+ ++ ASG +R
Sbjct: 86 LVLINPEIKKFGQQLCPFEEGCLSIPGVHLDVIRPDEIEVSYRDEQGKPKRIKASGLLSR 145
Query: 705 ILQHECDHLDGNLYVDKM 758
++QHE DHLDG ++VD++
Sbjct: 146 VIQHEIDHLDGVMFVDRV 163
>sp|Q88B43|DEF1_PSESM Peptide deformylase 1 OS=Pseudomonas syringae pv. tomato
GN=def1 PE=3 SV=1
Length = 168
Score = 67 bits (163), Expect = 3e-010
Identities = 33/76 (43%), Positives = 49/76 (64%)
Frame = +3
Query: 525 MVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQAR 704
MV +NPE++ ++++ + GCLSV GF V+R +V V DR G+ ++ A G A
Sbjct: 71 MVFINPEIEKLTDEMDQYQEGCLSVPGFYENVDRPQKVRVKALDRDGKPYELVAEGLLAI 130
Query: 705 ILQHECDHLDGNLYVD 752
+QHECDHL+G L+VD
Sbjct: 131 CIQHECDHLNGKLFVD 146
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,533,745,664
Number of Sequences: 518415
Number of Extensions: 12533745664
Number of Successful Extensions: 80211091
Number of sequences better than 0.0: 0
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