BLASTX 7.6.2
Query= UN03216 /QuerySize=1606
(1605 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G15390.1 | Symbols: PDF1A, ATDEF1 | PDF1A (PEP... 429 2e-120
TAIR9_protein||AT1G15400.2 | Symbols: | unknown protein | chr1:... 205 9e-053
TAIR9_protein||AT1G15400.1 | Symbols: | unknown protein | chr1:... 205 1e-052
TAIR9_protein||AT1G15400.3 | Symbols: | unknown protein | chr1:... 205 1e-052
TAIR9_protein||AT1G80180.1 | Symbols: | unknown protein | chr1:... 165 8e-041
TAIR9_protein||AT5G14660.1 | Symbols: PDF1B, DEF2, ATDEF2 | PDF1... 66 6e-011
TAIR9_protein||AT5G14660.2 | Symbols: PDF1B, DEF2, ATDEF2 | PDF1... 66 6e-011
>TAIR9_protein||AT1G15390.1 | Symbols: PDF1A, ATDEF1 | PDF1A (PEPTIDE
DEFORMYLASE 1A); peptide deformylase | chr1:5294653-5295625 FORWARD
Length = 270
Score = 429 bits (1103), Expect = 2e-120
Identities = 218/265 (82%), Positives = 238/265 (89%), Gaps = 5/265 (1%)
Frame = +3
Query: 42 METLFRFSLRLLPVSAAVTRRAIHFPVSRPSPSHFLNRSSSSLYKFSSSSSSVKTNAGWL 221
METLFR SLRLLPVSAAVT R+I FPVSRP SH LNR +L +SSSSS+ T AGWL
Sbjct: 11 METLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNLP--TSSSSSLSTKAGWL 68
Query: 222 LGLGDNKKKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERVQRIIDDMVKVMRLAPGV 401
LGLG+ KKK+ +LP+IVA+GDPVLHEKAREVDP EIGSER+Q+IIDDM+KVMRLAPGV
Sbjct: 69 LGLGE---KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGV 125
Query: 402 GLAAPQIGIPLRIIVLEDTKEYISYAPKEEVLAQQRRPFDLMVMVNPELKGVSNKKALFF 581
GLAAPQIG+PLRIIVLEDTKEYISYAPKEE+LAQ+RR FDLMVMVNP LK SNKKALFF
Sbjct: 126 GLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALFF 185
Query: 582 *GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQARILQHECDHLDGNLYVDKMI 761
GCLSVDGFRA VERYLEV VTGYDRQG+RI+VNASGWQARILQHECDHLDGNLYVDKM+
Sbjct: 186 EGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKMV 245
Query: 762 PRTFRTVDNLDLPLADGCPKLGPR* 836
PRTFRTVDNLDLPLA+GCPKLGP+*
Sbjct: 246 PRTFRTVDNLDLPLAEGCPKLGPQ* 270
>TAIR9_protein||AT1G15400.2 | Symbols: | unknown protein | chr1:5296402-5296824
REVERSE
Length = 141
Score = 205 bits (520), Expect = 9e-053
Identities = 106/149 (71%), Positives = 122/149 (81%), Gaps = 11/149 (7%)
Frame = -2
Query: 1538 MEGLQRSTISFRRQGSSGIVWDDRVIAELNKQATEQREEQSQRNEQQPKPLSETSEQAKQ 1359
MEGLQRSTISFRRQGSSGIV+DDR+IAELNK +++++SQR+E QPKP+SE+SEQ K
Sbjct: 1 MEGLQRSTISFRRQGSSGIVFDDRLIAELNKSGNNEQKDESQRDE-QPKPMSESSEQVKP 59
Query: 1358 NPNGDEKENLRPIKTGGPT---IERSRSNNGGGGGGPRHHHRTTGRVSPAVEPPSPILST 1188
DEK+ LRPIKTGG IERSRSN GGG + HHRTTGRVSPAV+PPSP +S+
Sbjct: 60 I---DEKDKLRPIKTGGGAPGGIERSRSN----GGGAQRHHRTTGRVSPAVDPPSPRISS 112
Query: 1187 CGCCSAFGKKPPGKKNNPRQRPPKRRSR* 1101
CGCCSAFGK PPGKK NPR+RPPKRRSR*
Sbjct: 113 CGCCSAFGKNPPGKKVNPRKRPPKRRSR* 141
>TAIR9_protein||AT1G15400.1 | Symbols: | unknown protein | chr1:5296033-5296824
REVERSE
Length = 146
Score = 205 bits (519), Expect = 1e-052
Identities = 106/148 (71%), Positives = 122/148 (82%), Gaps = 11/148 (7%)
Frame = -2
Query: 1538 MEGLQRSTISFRRQGSSGIVWDDRVIAELNKQATEQREEQSQRNEQQPKPLSETSEQAKQ 1359
MEGLQRSTISFRRQGSSGIV+DDR+IAELNK +++++SQR+E QPKP+SE+SEQ K
Sbjct: 1 MEGLQRSTISFRRQGSSGIVFDDRLIAELNKSGNNEQKDESQRDE-QPKPMSESSEQVKP 59
Query: 1358 NPNGDEKENLRPIKTGGPT---IERSRSNNGGGGGGPRHHHRTTGRVSPAVEPPSPILST 1188
DEK+ LRPIKTGG IERSRSN GGG + HHRTTGRVSPAV+PPSP +S+
Sbjct: 60 I---DEKDKLRPIKTGGGAPGGIERSRSN----GGGAQRHHRTTGRVSPAVDPPSPRISS 112
Query: 1187 CGCCSAFGKKPPGKKNNPRQRPPKRRSR 1104
CGCCSAFGK PPGKK NPR+RPPKRRSR
Sbjct: 113 CGCCSAFGKNPPGKKVNPRKRPPKRRSR 140
>TAIR9_protein||AT1G15400.3 | Symbols: | unknown protein | chr1:5296019-5296824
REVERSE
Length = 149
Score = 205 bits (519), Expect = 1e-052
Identities = 106/148 (71%), Positives = 122/148 (82%), Gaps = 11/148 (7%)
Frame = -2
Query: 1538 MEGLQRSTISFRRQGSSGIVWDDRVIAELNKQATEQREEQSQRNEQQPKPLSETSEQAKQ 1359
MEGLQRSTISFRRQGSSGIV+DDR+IAELNK +++++SQR+E QPKP+SE+SEQ K
Sbjct: 1 MEGLQRSTISFRRQGSSGIVFDDRLIAELNKSGNNEQKDESQRDE-QPKPMSESSEQVKP 59
Query: 1358 NPNGDEKENLRPIKTGGPT---IERSRSNNGGGGGGPRHHHRTTGRVSPAVEPPSPILST 1188
DEK+ LRPIKTGG IERSRSN GGG + HHRTTGRVSPAV+PPSP +S+
Sbjct: 60 I---DEKDKLRPIKTGGGAPGGIERSRSN----GGGAQRHHRTTGRVSPAVDPPSPRISS 112
Query: 1187 CGCCSAFGKKPPGKKNNPRQRPPKRRSR 1104
CGCCSAFGK PPGKK NPR+RPPKRRSR
Sbjct: 113 CGCCSAFGKNPPGKKVNPRKRPPKRRSR 140
>TAIR9_protein||AT1G80180.1 | Symbols: | unknown protein |
chr1:30157057-30157473 REVERSE
Length = 139
Score = 165 bits (417), Expect = 8e-041
Identities = 90/146 (61%), Positives = 105/146 (71%), Gaps = 7/146 (4%)
Frame = -2
Query: 1538 MEGLQRSTISFRRQGSSGIVWDDRVIAELNKQATEQREEQSQRNEQQPKPLSETSEQAKQ 1359
M GLQRSTISFRRQGSSGIVWDDR+IAEL++QA R+ ++ + ++Q K + TSE Q
Sbjct: 1 MAGLQRSTISFRRQGSSGIVWDDRLIAELSQQAANDRKGETLQQDEQAKLI--TSEVQDQ 58
Query: 1358 NPNGDEKENLRPIKTGGPTIERSRSNNGGGGGGPRHHHRTTGRVSPAVEPPSPILSTCGC 1179
E L+PI+T G +ERSRSN GGG HHR TGRVSPAV+PPSP LS GC
Sbjct: 59 TTKPIAGEGLKPIRTDG-GMERSRSN----GGGAIRHHRNTGRVSPAVDPPSPRLSAFGC 113
Query: 1178 CSAFGKKPPGKKNNPRQRPPKRRSR* 1101
CSAFGKK PGKK N R+RP KRRSR*
Sbjct: 114 CSAFGKKQPGKKVNQRKRPAKRRSR* 139
>TAIR9_protein||AT5G14660.1 | Symbols: PDF1B, DEF2, ATDEF2 | PDF1B (PEPTIDE
DEFORMYLASE 1B); iron ion binding / peptide deformylase |
chr5:4727129-4728671 REVERSE
Length = 274
Score = 66 bits (159), Expect = 6e-011
Identities = 35/86 (40%), Positives = 50/86 (58%)
Frame = +3
Query: 525 MVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQAR 704
+V+VNP++K S+K F GCLS G A V R V++ D GER ++ S AR
Sbjct: 150 IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPAR 209
Query: 705 ILQHECDHLDGNLYVDKMIPRTFRTV 782
I QHE DHL+G L+ D+M + ++
Sbjct: 210 IFQHEYDHLEGVLFFDRMTDQVLDSI 235
>TAIR9_protein||AT5G14660.2 | Symbols: PDF1B, DEF2, ATDEF2 | PDF1B (PEPTIDE
DEFORMYLASE 1B); iron ion binding / peptide deformylase |
chr5:4727129-4728671 REVERSE
Length = 274
Score = 66 bits (159), Expect = 6e-011
Identities = 35/86 (40%), Positives = 50/86 (58%)
Frame = +3
Query: 525 MVMVNPELKGVSNKKALFF*GCLSVDGFRAVVERYLEVEVTGYDRQGERIQVNASGWQAR 704
+V+VNP++K S+K F GCLS G A V R V++ D GER ++ S AR
Sbjct: 150 IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPAR 209
Query: 705 ILQHECDHLDGNLYVDKMIPRTFRTV 782
I QHE DHL+G L+ D+M + ++
Sbjct: 210 IFQHEYDHLEGVLFFDRMTDQVLDSI 235
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,340,731,947
Number of Sequences: 33410
Number of Extensions: 2340731947
Number of Successful Extensions: 84968550
Number of sequences better than 0.0: 0
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