BLASTX 7.6.2
Query= UN03223 /QuerySize=929
(928 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FV53|DEF1A_ARATH Peptide deformylase 1A, chloroplastic OS=A... 439 2e-122
sp|Q9FUZ0|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic OS=S... 323 2e-087
sp|B6RGY0|DEF1A_ORYSJ Peptide deformylase 1A, chloroplastic OS=O... 293 2e-078
sp|Q7NJV3|DEF1_GLOVI Peptide deformylase 1 OS=Gloeobacter violac... 155 6e-037
sp|Q9HBH1|DEFM_HUMAN Peptide deformylase, mitochondrial OS=Homo ... 139 3e-032
sp|Q825U9|DEF3_STRAW Peptide deformylase 3 OS=Streptomyces averm... 138 1e-031
sp|Q9RD27|DEF1_STRCO Peptide deformylase 1 OS=Streptomyces coeli... 136 4e-031
sp|Q8G534|DEF1_BIFLO Peptide deformylase 1 OS=Bifidobacterium lo... 126 3e-028
sp|A1A2Z1|DEF_BIFAA Peptide deformylase OS=Bifidobacterium adole... 119 3e-026
sp|B3CTU1|DEF_ORITI Peptide deformylase OS=Orientia tsutsugamush... 105 7e-022
sp|A5CF65|DEF_ORITB Peptide deformylase OS=Orientia tsutsugamush... 102 3e-021
sp|Q8XZJ6|DEF2_RALSO Peptide deformylase 2 OS=Ralstonia solanace... 77 1e-013
sp|Q7W0Q0|DEF1_BORPE Peptide deformylase 1 OS=Bordetella pertuss... 77 2e-013
sp|Q7W4K0|DEF2_BORPA Peptide deformylase 2 OS=Bordetella paraper... 77 2e-013
sp|Q7WG25|DEF2_BORBR Peptide deformylase 2 OS=Bordetella bronchi... 77 2e-013
sp|B1XJP0|DEF_SYNP2 Peptide deformylase OS=Synechococcus sp. (st... 74 1e-012
sp|B8FHH0|DEF_DESAA Peptide deformylase OS=Desulfatibacillum alk... 73 3e-012
sp|Q826Q0|DEF2_STRAW Peptide deformylase 2 OS=Streptomyces averm... 72 6e-012
sp|Q88B43|DEF1_PSESM Peptide deformylase 1 OS=Pseudomonas syring... 71 8e-012
sp|Q9FCA2|DEF2_STRCO Peptide deformylase 2 OS=Streptomyces coeli... 71 8e-012
>sp|Q9FV53|DEF1A_ARATH Peptide deformylase 1A, chloroplastic OS=Arabidopsis
thaliana GN=PDF1A PE=1 SV=2
Length = 259
Score = 439 bits (1127), Expect = 2e-122
Identities = 222/265 (83%), Positives = 241/265 (90%), Gaps = 6/265 (2%)
Frame = +1
Query: 10 METLFRVSLRLLPVSAAVTCRVIRFPVSIPSSSHFLNRSSSSLYKFSSSSSSSSVKTNAG 189
METLFRVSLRLLPVSAAVTCR IRFPVS P SSH LNR +L +SSSSS+ T AG
Sbjct: 1 METLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNL----PTSSSSSLSTKAG 56
Query: 190 WLLGLGDKTKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERIQRIIDDMVKVMRLAPG 369
WLLGLG+ KKK+ +LP+IVA+GDPVLHEKAREVDP EIGSERIQ+IIDDM+KVMRLAPG
Sbjct: 57 WLLGLGE--KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPG 114
Query: 370 VGLAAPQIGIPLRIIVLEDTREYISYAPKEEVLAQQRRPFDLLVMVNPELKGVSNKKALF 549
VGLAAPQIG+PLRIIVLEDT+EYISYAPKEE+LAQ+RR FDL+VMVNP LK SNKKALF
Sbjct: 115 VGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALF 174
Query: 550 FEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARILQHECDHLDGNLYVDKM 729
FEGCLSVDGFRA VERYLEV VTGYDRQGKRI+VNASGWQARILQHECDHLDGNLYVDKM
Sbjct: 175 FEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKM 234
Query: 730 IPRTFRTVDNLDLPLADGCPKLGPR 804
+PRTFRTVDNLDLPLA+GCPKLGP+
Sbjct: 235 VPRTFRTVDNLDLPLAEGCPKLGPQ 259
>sp|Q9FUZ0|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic OS=Solanum
lycopersicum GN=PDF1A PE=2 SV=1
Length = 277
Score = 323 bits (826), Expect = 2e-087
Identities = 162/216 (75%), Positives = 182/216 (84%), Gaps = 3/216 (1%)
Frame = +1
Query: 151 SSSSSSSVKTNAGWLLGLGDKTKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERIQRI 330
S + SS AGW LGLG+K K+ +PDIV AGDPVLHE ++++ EEIGSERIQ+I
Sbjct: 63 SKKNYSSATARAGWFLGLGEKKKQA---MPDIVKAGDPVLHEPSQDIPLEEIGSERIQKI 119
Query: 331 IDDMVKVMRLAPGVGLAAPQIGIPLRIIVLEDTREYISYAPKEEVLAQQRRPFDLLVMVN 510
I++MVKVMR APGVGLAAPQIGIPL+IIVLEDT EYISYAPK+E AQ RRPF LLV++N
Sbjct: 120 IEEMVKVMRNAPGVGLAAPQIGIPLKIIVLEDTNEYISYAPKDETKAQDRRPFGLLVIIN 179
Query: 511 PELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARILQHE 690
P+LK NK ALFFEGCLSVDGFRAVVER+LEVEVTG DR GK I+V+ASGWQARILQHE
Sbjct: 180 PKLKKKGNKTALFFEGCLSVDGFRAVVERHLEVEVTGLDRNGKAIKVDASGWQARILQHE 239
Query: 691 CDHLDGNLYVDKMIPRTFRTVDNLDLPLADGCPKLG 798
DHLDG LYVDKM PRTFRTV+NLDLPLA GCPKLG
Sbjct: 240 YDHLDGTLYVDKMAPRTFRTVENLDLPLAAGCPKLG 275
>sp|B6RGY0|DEF1A_ORYSJ Peptide deformylase 1A, chloroplastic OS=Oryza sativa
subsp. japonica GN=PDF1A PE=2 SV=1
Length = 260
Score = 293 bits (748), Expect = 2e-078
Identities = 153/262 (58%), Positives = 190/262 (72%), Gaps = 11/262 (4%)
Frame = +1
Query: 34 LRLLPVSAAVTCRVIRFPVSIPSSSHFLNRSSSSLYKFSSSSSSSSVKTNAGWLLGL--- 204
LR L +A + P ++ +S+ R+S ++SS +S+ GWL GL
Sbjct: 5 LRPLSAAALLLSPAAPLPTAVAASA---RRASPGGRRWSSVRASAG---GGGWLSGLLGG 58
Query: 205 --GDKTKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERIQRIIDDMVKVMRLAPGVGL 378
G T P V AGDPVLHE A++V P +I SE++Q +ID MV VMR APGVGL
Sbjct: 59 KGGGGAPTAMTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKVQGVIDRMVAVMRKAPGVGL 118
Query: 379 AAPQIGIPLRIIVLEDTREYISYAPKEEVLAQQRRPFDLLVMVNPELKGVSNKKALFFEG 558
AAPQIG+PL+IIVLEDT+EYISYAPK+++ AQ RRPFDLLV++NP+LK S + ALFFEG
Sbjct: 119 AAPQIGVPLKIIVLEDTQEYISYAPKKDIEAQDRRPFDLLVIINPKLKTTSKRTALFFEG 178
Query: 559 CLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARILQHECDHLDGNLYVDKMIPR 738
CLSVDG+RA+VER+L+VEV+G DR G+ I+V ASGWQARILQHECDHL+G LYVD M+PR
Sbjct: 179 CLSVDGYRALVERHLDVEVSGLDRNGRPIKVEASGWQARILQHECDHLEGTLYVDTMVPR 238
Query: 739 TFRTVDNLDLPLADGCPKLGPR 804
TFR VDNLDLPL GCP +G R
Sbjct: 239 TFRIVDNLDLPLPVGCPPIGAR 260
>sp|Q7NJV3|DEF1_GLOVI Peptide deformylase 1 OS=Gloeobacter violaceus GN=def1
PE=3 SV=1
Length = 227
Score = 155 bits (390), Expect = 6e-037
Identities = 79/175 (45%), Positives = 112/175 (64%)
Frame = +1
Query: 241 DIVAAGDPVLHEKAREVDPEEIGSERIQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVL 420
+IV GDPVL A+ ++ +EI SE IQ++I M + MR APGVGLAAPQ+G+ ++++V+
Sbjct: 47 EIVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQLVVI 106
Query: 421 EDTREYISYAPKEEVLAQQRRPFDLLVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERY 600
ED EYI E ++R P V++NP L + A+FFEGCLS+ G++ +V R
Sbjct: 107 EDRPEYIERLSGAERREREREPVPFHVLINPVLSVEGEESAVFFEGCLSIPGYQGLVARA 166
Query: 601 LEVEVTGYDRQGKRIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRTVDNLD 765
V V D + + + A GW ARILQHE DHL+G L VD+M +TF T++N D
Sbjct: 167 RVVRVEALDERAAPVVIRAHGWYARILQHEIDHLNGLLCVDRMDLQTFSTLENYD 221
>sp|Q9HBH1|DEFM_HUMAN Peptide deformylase, mitochondrial OS=Homo sapiens GN=PDF
PE=1 SV=1
Length = 243
Score = 139 bits (349), Expect = 3e-032
Identities = 71/170 (41%), Positives = 101/170 (59%)
Frame = +1
Query: 244 IVAAGDPVLHEKAREVDPEEIGSERIQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLE 423
+ GDPVL A V+ ++G +QR+ +V+VMR VGL+APQ+G+P +++ LE
Sbjct: 67 VCQVGDPVLRGVAAPVERAQLGGPELQRLTQRLVQVMRRRRCVGLSAPQLGVPRQVLALE 126
Query: 424 DTREYISYAPKEEVLAQQRRPFDLLVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYL 603
P + +Q PF L V VNP L+ + ++ F EGC SV GF A V R+
Sbjct: 127 LPEALCRECPPRQRALRQMEPFPLRVFVNPSLRVLDSRLVTFPEGCESVAGFLACVPRFQ 186
Query: 604 EVEVTGYDRQGKRIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRTV 753
V+++G D G+++ ASGW ARI+QHE DHL G L++DKM RTF V
Sbjct: 187 AVQISGLDPNGEQVVWQASGWAARIIQHEMDHLQGCLFIDKMDSRTFTNV 236
>sp|Q825U9|DEF3_STRAW Peptide deformylase 3 OS=Streptomyces avermitilis GN=def3
PE=3 SV=1
Length = 224
Score = 138 bits (345), Expect = 1e-031
Identities = 77/183 (42%), Positives = 108/183 (59%), Gaps = 5/183 (2%)
Frame = +1
Query: 244 IVAAGDPVLHEKAREVDPEEIGSERIQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLE 423
IVAAGDPVL A D ++G + R ++ + M APGVGLAAPQ+G+ LRI V+E
Sbjct: 35 IVAAGDPVLRRGAEPYD-GQLGPGLLARFVEALRLTMHAAPGVGLAAPQVGVGLRIAVIE 93
Query: 424 DTREYISYAPKEEVLAQQRRPFDLLVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYL 603
D + P+E + R P V+VNP + V + +A FFEGCLSV G++AVV R
Sbjct: 94 DP----APVPEEVGAVRGRVPQPFRVLVNPSYEAVGSDRAAFFEGCLSVPGWQAVVARPA 149
Query: 604 EVEVTGYDRQGKRIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRTVDNLDLPLADG 783
V +T D G+ + +GW ARI+QHE DHLDG LY+D+ R+ + + + L +
Sbjct: 150 RVRLTALDEHGRAVDEEFTGWPARIVQHETDHLDGMLYLDRAELRSLSSNEAMALRWSQP 209
Query: 784 CPK 792
P+
Sbjct: 210 TPE 212
>sp|Q9RD27|DEF1_STRCO Peptide deformylase 1 OS=Streptomyces coelicolor GN=def1
PE=3 SV=1
Length = 218
Score = 136 bits (340), Expect = 4e-031
Identities = 72/161 (44%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Frame = +1
Query: 244 IVAAGDPVLHEKAREVDPEEIGSERIQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLE 423
IVAAGDPVL A D ++ +R ++ + M APGVGLAAPQ+G+ LR+ V+E
Sbjct: 26 IVAAGDPVLRRAAEPYD-GQVAPALFERFVEALRLTMHAAPGVGLAAPQVGVGLRVAVIE 84
Query: 424 DTREYISYAPKEEVLAQQRRPFDLLVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYL 603
D + P E +A+ R P V+VNP + +A FFEGCLSV G++AVV R+
Sbjct: 85 DP----APVPDEVRVARGRVPQPFRVLVNPSYEPAGAGRAAFFEGCLSVPGWQAVVARHA 140
Query: 604 EVEVTGYDRQGKRIQVNASGWQARILQHECDHLDGNLYVDK 726
EV + +D G+ + +GW ARI+QHE DHLDG LY+D+
Sbjct: 141 EVRLRAHDEHGRAVDEVFAGWPARIVQHETDHLDGTLYLDR 181
>sp|Q8G534|DEF1_BIFLO Peptide deformylase 1 OS=Bifidobacterium longum GN=def1
PE=3 SV=1
Length = 217
Score = 126 bits (315), Expect = 3e-028
Identities = 74/185 (40%), Positives = 106/185 (57%), Gaps = 8/185 (4%)
Frame = +1
Query: 211 KTKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERIQRIIDDMVKVMRLAPGVGLAAPQ 390
KT K+ LP IV AG+PVL ++ + ++ + ++ID M M APGVGLAA Q
Sbjct: 21 KTGGKEKLLP-IVQAGEPVLRQRTVAYN-GQLSKRTLAKLIDTMHTTMLEAPGVGLAATQ 78
Query: 391 IGIPLRIIVLEDTREYISYAPKEEVLAQQRRPFDLLVMVNPELKGVSNKKALFFEGCLSV 570
IG+ L + V+ED + +E ++ F V++NP K S+K A F+EGCLS
Sbjct: 79 IGLGLALAVVED------HVRDDEDDPREIAEFPFHVIINPSYKPTSDKTASFYEGCLSF 132
Query: 571 DGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRT 750
DG++AV +R+L++ D GK GW ARI QHE DHL G LY+D+ R+ T
Sbjct: 133 DGYQAVRKRWLDITAEWDDEDGKHHSEPLHGWPARIFQHETDHLSGELYIDRAEIRSLTT 192
Query: 751 VDNLD 765
+NL+
Sbjct: 193 NENLE 197
>sp|A1A2Z1|DEF_BIFAA Peptide deformylase OS=Bifidobacterium adolescentis (strain
ATCC 15703 / DSM 20083) GN=def PE=3 SV=1
Length = 218
Score = 119 bits (298), Expect = 3e-026
Identities = 67/185 (36%), Positives = 105/185 (56%), Gaps = 7/185 (3%)
Frame = +1
Query: 211 KTKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERIQRIIDDMVKVMRLAPGVGLAAPQ 390
KT K+ +P IV AG+PVL ++ D ++ + + ++ID M M APGVGLAA Q
Sbjct: 21 KTGGKEKIMP-IVQAGEPVLRQQTIAYD-GQLSRKTLDKLIDTMRTTMLEAPGVGLAATQ 78
Query: 391 IGIPLRIIVLEDTREYISYAPKEEVLAQQRRPFDLLVMVNPELKGVSNKKALFFEGCLSV 570
IG+ L + V+ED ++ ++ F ++NP + + + F+EGCLS
Sbjct: 79 IGLGLALAVVED-----HVCEGDDGDPREAAEFPFHAIINPSYEPIGTETRSFYEGCLSF 133
Query: 571 DGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARILQHECDHLDGNLYVDKMIPRTFRT 750
DG++AV +R+L++ D G + + + GW ARI QHE DHL G LY+D+ R+ T
Sbjct: 134 DGYQAVRKRWLDITARWQDEDGNKHEEHLHGWPARIFQHETDHLSGELYIDQAEIRSLTT 193
Query: 751 VDNLD 765
+NL+
Sbjct: 194 NENLE 198
>sp|B3CTU1|DEF_ORITI Peptide deformylase OS=Orientia tsutsugamushi (strain
Ikeda) GN=def PE=3 SV=1
Length = 181
Score = 105 bits (260), Expect = 7e-022
Identities = 61/143 (42%), Positives = 86/143 (60%), Gaps = 5/143 (3%)
Frame = +1
Query: 295 PEEIGSERIQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLEDTREYISYAPKEEVLAQ 474
P + ++ I++++DDM++ M GVGLAAPQ+ + RIIVL+ ++ I KE+ +
Sbjct: 20 PVDTVNDSIRQLMDDMLETMYHNHGVGLAAPQVAVSKRIIVLDLSKVDI----KEDNITN 75
Query: 475 QRRPFDLLVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVN 654
+ L MVNP +K +SN+ A EGCLS+ V RY E++VT D K +N
Sbjct: 76 SEYKYPLF-MVNPIVKAISNQTATAKEGCLSLPKQAIEVSRYHEIQVTYLDYYNKLTTLN 134
Query: 655 ASGWQARILQHECDHLDGNLYVD 723
A GW AR +QHE DHLDG L VD
Sbjct: 135 AEGWLARAIQHEVDHLDGILLVD 157
>sp|A5CF65|DEF_ORITB Peptide deformylase OS=Orientia tsutsugamushi (strain
Boryong) GN=def PE=3 SV=1
Length = 181
Score = 102 bits (254), Expect = 3e-021
Identities = 60/143 (41%), Positives = 86/143 (60%), Gaps = 5/143 (3%)
Frame = +1
Query: 295 PEEIGSERIQRIIDDMVKVMRLAPGVGLAAPQIGIPLRIIVLEDTREYISYAPKEEVLAQ 474
P + ++ I+++IDDM++ M GVGLAAPQ+ + RIIVL+ ++ I +E+ +
Sbjct: 20 PVDTVNDSIRQLIDDMLETMYHNHGVGLAAPQVAVSKRIIVLDLSKVDI----EEDNITN 75
Query: 475 QRRPFDLLVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVN 654
+ L MVNP +K +SN+ EGCLS+ V RY E++VT D K +N
Sbjct: 76 SEYKYPLF-MVNPIVKAISNQTVTAKEGCLSLPKQAIEVSRYHEIQVTYLDYYNKLKTLN 134
Query: 655 ASGWQARILQHECDHLDGNLYVD 723
A+GW AR +QHE DHLDG L VD
Sbjct: 135 AAGWLARAIQHEVDHLDGILLVD 157
>sp|Q8XZJ6|DEF2_RALSO Peptide deformylase 2 OS=Ralstonia solanacearum GN=def2
PE=3 SV=1
Length = 177
Score = 77 bits (189), Expect = 1e-013
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = +1
Query: 499 VMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARI 678
V++NP ++ +S+ +EGCLSV G R VV RY + TGYD+ G I A G+ AR+
Sbjct: 79 VLINPTIEPLSDAMEDGWEGCLSVPGLRGVVPRYTRLRYTGYDQHGHAIDRIAEGFHARV 138
Query: 679 LQHECDHLDGNLY 717
+QHECDHL G LY
Sbjct: 139 VQHECDHLQGILY 151
>sp|Q7W0Q0|DEF1_BORPE Peptide deformylase 1 OS=Bordetella pertussis GN=def1 PE=3
SV=1
Length = 176
Score = 77 bits (188), Expect = 2e-013
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +1
Query: 499 VMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARI 678
++ NP ++ +S++ +EGCLSV G R +V RY + +GYD G+RI+ A G+ AR+
Sbjct: 79 ILCNPVIEPLSDEMEDGWEGCLSVPGLRGLVPRYRHIRYSGYDPAGQRIEREAEGFHARV 138
Query: 679 LQHECDHLDGNLY 717
+QHECDHL G LY
Sbjct: 139 VQHECDHLIGRLY 151
>sp|Q7W4K0|DEF2_BORPA Peptide deformylase 2 OS=Bordetella parapertussis GN=def2
PE=3 SV=1
Length = 176
Score = 77 bits (188), Expect = 2e-013
Identities = 34/73 (46%), Positives = 50/73 (68%)
Frame = +1
Query: 499 VMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARI 678
++ NP ++ +S++ +EGCLSV G R +V RY + +GYD G+RI+ A G+ AR+
Sbjct: 79 ILCNPVIEPLSDEMEDGWEGCLSVPGLRGLVPRYRHIRYSGYDPAGQRIEREAEGFHARV 138
Query: 679 LQHECDHLDGNLY 717
+QHECDHL G LY
Sbjct: 139 VQHECDHLIGRLY 151
>sp|Q7WG25|DEF2_BORBR Peptide deformylase 2 OS=Bordetella bronchiseptica GN=def2
PE=3 SV=1
Length = 176
Score = 77 bits (187), Expect = 2e-013
Identities = 34/73 (46%), Positives = 49/73 (67%)
Frame = +1
Query: 499 VMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARI 678
++ NP ++ +S + +EGCLSV G R +V RY + +GYD G+RI+ A G+ AR+
Sbjct: 79 ILCNPVIEPLSGEMEDGWEGCLSVPGLRGLVPRYRHIRYSGYDPAGQRIEREAEGFHARV 138
Query: 679 LQHECDHLDGNLY 717
+QHECDHL G LY
Sbjct: 139 VQHECDHLIGRLY 151
>sp|B1XJP0|DEF_SYNP2 Peptide deformylase OS=Synechococcus sp. (strain ATCC 27264
/ PCC 7002 / PR-6) GN=def PE=3 SV=1
Length = 187
Score = 74 bits (181), Expect = 1e-012
Identities = 36/78 (46%), Positives = 52/78 (66%)
Frame = +1
Query: 496 LVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQAR 675
LV++NPE+K + F EGCLS+ G V R E+EV+ D QGK ++ ASG +R
Sbjct: 86 LVLINPEIKKFGQQLCPFEEGCLSIPGVHLDVIRPDEIEVSYRDEQGKPKRIKASGLLSR 145
Query: 676 ILQHECDHLDGNLYVDKM 729
++QHE DHLDG ++VD++
Sbjct: 146 VIQHEIDHLDGVMFVDRV 163
>sp|B8FHH0|DEF_DESAA Peptide deformylase OS=Desulfatibacillum alkenivorans
(strain AK-01) GN=def PE=3 SV=1
Length = 172
Score = 73 bits (177), Expect = 3e-012
Identities = 35/79 (44%), Positives = 51/79 (64%)
Frame = +1
Query: 493 LLVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQA 672
L V++NP++ K EGCLSV FRA V R+ V V G D +GK ++++A G A
Sbjct: 74 LKVLINPKIVHTEGKVTSENEGCLSVPEFRADVPRFACVTVEGVDHEGKPVKIDAEGLLA 133
Query: 673 RILQHECDHLDGNLYVDKM 729
+LQHE DHL+G L++D++
Sbjct: 134 IVLQHEIDHLEGKLFIDRI 152
>sp|Q826Q0|DEF2_STRAW Peptide deformylase 2 OS=Streptomyces avermitilis GN=def2
PE=3 SV=1
Length = 186
Score = 72 bits (174), Expect = 6e-012
Identities = 35/76 (46%), Positives = 45/76 (59%)
Frame = +1
Query: 502 MVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARIL 681
+VNP L EGCLS+ G A ERY V G+ G+ ++V +GW AR L
Sbjct: 85 VVNPRLIEADGVVLRGPEGCLSLPGLEAGTERYDRAVVEGFTTDGEPVRVLGTGWFARCL 144
Query: 682 QHECDHLDGNLYVDKM 729
QHECDHLDG +YVD++
Sbjct: 145 QHECDHLDGGVYVDRV 160
>sp|Q88B43|DEF1_PSESM Peptide deformylase 1 OS=Pseudomonas syringae pv. tomato
GN=def1 PE=3 SV=1
Length = 168
Score = 71 bits (173), Expect = 8e-012
Identities = 34/76 (44%), Positives = 50/76 (65%)
Frame = +1
Query: 496 LVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQAR 675
+V +NPE++ ++++ + EGCLSV GF V+R +V V DR GK ++ A G A
Sbjct: 71 MVFINPEIEKLTDEMDQYQEGCLSVPGFYENVDRPQKVRVKALDRDGKPYELVAEGLLAI 130
Query: 676 ILQHECDHLDGNLYVD 723
+QHECDHL+G L+VD
Sbjct: 131 CIQHECDHLNGKLFVD 146
>sp|Q9FCA2|DEF2_STRCO Peptide deformylase 2 OS=Streptomyces coelicolor GN=def2
PE=3 SV=2
Length = 179
Score = 71 bits (173), Expect = 8e-012
Identities = 36/82 (43%), Positives = 47/82 (57%)
Frame = +1
Query: 502 MVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARIL 681
+VNP L EGCLS+ G A ERY E VTG+ G+ + V +G+ AR L
Sbjct: 85 VVNPRLVETGGVVVRGPEGCLSLPGLEAGTERYDEAVVTGFTVAGEPVTVRGTGFFARCL 144
Query: 682 QHECDHLDGNLYVDKMIPRTFR 747
QHECDHL+G +Y D++ R R
Sbjct: 145 QHECDHLEGRVYADRLTGRRHR 166
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,533,745,664
Number of Sequences: 518415
Number of Extensions: 12533745664
Number of Successful Extensions: 80211091
Number of sequences better than 0.0: 0
|
