Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN03223


BLASTX 7.6.2

Query= UN03223 /QuerySize=929
        (928 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G15390.1 | Symbols: PDF1A, ATDEF1 | PDF1A (PEP...    439   1e-123
TAIR9_protein||AT5G14660.1 | Symbols: PDF1B, DEF2, ATDEF2 | PDF1...     68   6e-012
TAIR9_protein||AT5G14660.2 | Symbols: PDF1B, DEF2, ATDEF2 | PDF1...     68   6e-012

>TAIR9_protein||AT1G15390.1 | Symbols: PDF1A, ATDEF1 | PDF1A (PEPTIDE
        DEFORMYLASE 1A); peptide deformylase | chr1:5294653-5295625 FORWARD

          Length = 270

 Score =  439 bits (1128), Expect = 1e-123
 Identities = 222/266 (83%), Positives = 241/266 (90%), Gaps = 6/266 (2%)
 Frame = +1

Query:  10 METLFRVSLRLLPVSAAVTCRVIRFPVSIPSSSHFLNRSSSSLYKFSSSSSSSSVKTNAG 189
           METLFRVSLRLLPVSAAVTCR IRFPVS P SSH LNR   +L     +SSSSS+ T AG
Sbjct:  11 METLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLLNRKLYNL----PTSSSSSLSTKAG 66

Query: 190 WLLGLGDKTKKKQTNLPDIVAAGDPVLHEKAREVDPEEIGSERIQRIIDDMVKVMRLAPG 369
           WLLGLG+  KKK+ +LP+IVA+GDPVLHEKAREVDP EIGSERIQ+IIDDM+KVMRLAPG
Sbjct:  67 WLLGLGE--KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPG 124

Query: 370 VGLAAPQIGIPLRIIVLEDTREYISYAPKEEVLAQQRRPFDLLVMVNPELKGVSNKKALF 549
           VGLAAPQIG+PLRIIVLEDT+EYISYAPKEE+LAQ+RR FDL+VMVNP LK  SNKKALF
Sbjct: 125 VGLAAPQIGVPLRIIVLEDTKEYISYAPKEEILAQERRHFDLMVMVNPVLKERSNKKALF 184

Query: 550 FEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQARILQHECDHLDGNLYVDKM 729
           FEGCLSVDGFRA VERYLEV VTGYDRQGKRI+VNASGWQARILQHECDHLDGNLYVDKM
Sbjct: 185 FEGCLSVDGFRAAVERYLEVVVTGYDRQGKRIEVNASGWQARILQHECDHLDGNLYVDKM 244

Query: 730 IPRTFRTVDNLDLPLADGCPKLGPR* 807
           +PRTFRTVDNLDLPLA+GCPKLGP+*
Sbjct: 245 VPRTFRTVDNLDLPLAEGCPKLGPQ* 270

>TAIR9_protein||AT5G14660.1 | Symbols: PDF1B, DEF2, ATDEF2 | PDF1B (PEPTIDE
        DEFORMYLASE 1B); iron ion binding / peptide deformylase |
        chr5:4727129-4728671 REVERSE

          Length = 274

 Score =  68 bits (165), Expect = 6e-012
 Identities = 35/86 (40%), Positives = 51/86 (59%)
 Frame = +1

Query: 496 LVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQAR 675
           +V+VNP++K  S+K   F EGCLS  G  A V R   V++   D  G+R  ++ S   AR
Sbjct: 150 IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPAR 209

Query: 676 ILQHECDHLDGNLYVDKMIPRTFRTV 753
           I QHE DHL+G L+ D+M  +   ++
Sbjct: 210 IFQHEYDHLEGVLFFDRMTDQVLDSI 235

>TAIR9_protein||AT5G14660.2 | Symbols: PDF1B, DEF2, ATDEF2 | PDF1B (PEPTIDE
        DEFORMYLASE 1B); iron ion binding / peptide deformylase |
        chr5:4727129-4728671 REVERSE

          Length = 274

 Score =  68 bits (165), Expect = 6e-012
 Identities = 35/86 (40%), Positives = 51/86 (59%)
 Frame = +1

Query: 496 LVMVNPELKGVSNKKALFFEGCLSVDGFRAVVERYLEVEVTGYDRQGKRIQVNASGWQAR 675
           +V+VNP++K  S+K   F EGCLS  G  A V R   V++   D  G+R  ++ S   AR
Sbjct: 150 IVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFSISLSRLPAR 209

Query: 676 ILQHECDHLDGNLYVDKMIPRTFRTV 753
           I QHE DHL+G L+ D+M  +   ++
Sbjct: 210 IFQHEYDHLEGVLFFDRMTDQVLDSI 235

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,340,731,947
Number of Sequences: 33410
Number of Extensions: 2340731947
Number of Successful Extensions: 84968550
Number of sequences better than 0.0: 0