BLASTX 7.6.2

Query= UN03251 /QuerySize=1379
        (1378 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9SVS0|PUS6_ARATH RNA pseudourine synthase 6, chloroplastic O...    472   3e-132
sp|A3BN26|PUS6_ORYSJ RNA pseudourine synthase 6, chloroplastic O...    327   2e-088

>sp|Q9SVS0|PUS6_ARATH RNA pseudourine synthase 6, chloroplastic OS=Arabidopsis
        thaliana GN=At4g21770 PE=2 SV=1

          Length = 472

 Score =  472 bits (1214), Expect = 3e-132
 Identities = 243/306 (79%), Positives = 265/306 (86%), Gaps = 9/306 (2%)
 Frame = +2

Query:   2 GYRNLTSPVSLLRTLASTRFTTPLLR-YKHSPRLTSSSSSGRLTCLSSLQIDSTNQTTLS 178
           GYRNLT+PVSLLRTLASTR TTPL R  KHSPR  SS    R TCLS L+ DS NQTTLS
Sbjct:   9 GYRNLTAPVSLLRTLASTRVTTPLFRSNKHSPRFISSPK--RFTCLSLLKTDSQNQTTLS 66

Query: 179 S---SGHFDYNRLVPCPAHNFPPRIEHMVVLE-DVRVADYISKELNLPPLYVADLIEFGA 346
           S   SG+ +YNRL+PCPA+N PPRIEHMVVLE DV V+++ISK+L+LPPLYVADLI FGA
Sbjct:  67 SSSNSGYHEYNRLMPCPAYNLPPRIEHMVVLEDDVLVSEFISKQLDLPPLYVADLIRFGA 126

Query: 347 VHYALVCPKPPLTATPEQIKLFKEVTSPSVLSKRTSIKGKTVREAQKTFRVTHVNQFVEA 526
           VHYALVCPKPP TATPE+I LF+EVTSPSVL KR+SIKGKTVREAQKTFRVTH NQ+ EA
Sbjct: 127 VHYALVCPKPPPTATPEEIILFEEVTSPSVLKKRSSIKGKTVREAQKTFRVTHTNQYAEA 186

Query: 527 GTYLRVHVHPKRSPRCYEIDWKSRVIAVTDSYVVLDKPAGTTVGGTTDNIEESCATFASR 706
           GTYLRVHVHPKRSPRCYEIDWKSR++AVTDSYV+LDKPAGTTVGGTTDNIEESCATFASR
Sbjct: 187 GTYLRVHVHPKRSPRCYEIDWKSRIVAVTDSYVILDKPAGTTVGGTTDNIEESCATFASR 246

Query: 707 ALDLAEPLKTTHQIDNCTEDCVIFARTKEYCSVFHTKIRNKEVKTHQIRAQLAACGAPLV 886
           ALDL EPLKTTHQIDNCTE CV+FARTKEYCSVFHTKIRNKEVK  ++   LAA   P+ 
Sbjct: 247 ALDLPEPLKTTHQIDNCTEGCVVFARTKEYCSVFHTKIRNKEVK--KLYRALAAAPLPIG 304

Query: 887 GDSMYM 904
             S YM
Sbjct: 305 IISHYM 310


 Score =  183 bits (463), Expect = 3e-045
 Identities = 82/97 (84%), Positives = 87/97 (89%)
 Frame = +2

Query:  836 KTHQIRAQLAACGAPLVGDSMYMPAAIAETVSPGINPYGKGNEHCTMEENDKETAVFEWI 1015
            KTHQIRAQLAACGAPLVGDSMYMPAAIAE  +P  NPYGK  +H TMEEN KETAV EWI
Sbjct:  376 KTHQIRAQLAACGAPLVGDSMYMPAAIAEMGNPDTNPYGKAKKHYTMEENQKETAVAEWI 435

Query: 1016 ERHGKEPKVGIGFQACQISWEDDDGEHFYEAGTPWWR 1126
            +RHGKEP+VGIG QACQISW+DDDGEHFYEAGTPWWR
Sbjct:  436 DRHGKEPRVGIGLQACQISWDDDDGEHFYEAGTPWWR 472

>sp|A3BN26|PUS6_ORYSJ RNA pseudourine synthase 6, chloroplastic OS=Oryza sativa
        subsp. japonica GN=Os07g0660400 PE=2 SV=1

          Length = 477

 Score =  327 bits (836), Expect = 2e-088
 Identities = 175/296 (59%), Positives = 215/296 (72%), Gaps = 17/296 (5%)
 Frame = +2

Query:   5 YRNLTSPVSLLRTLASTRFTTPLLRYKHSPRLTSSSSSGRLTCLSSLQIDSTNQTTL--- 175
           +R +  P  L R L+S   ++PLLR +H   L S ++      LS+  + ST+  T+   
Sbjct:  17 HRPVQPPPFLHRALSS---SSPLLR-RHRAALHSPAAP-----LSAAAV-STSAATVEAP 66

Query: 176 SSSGHFDYNRLVPCPAHNFPPRIEHMVVLEDVRVADYISKELNLPPLYVADLIEFGAVHY 355
           +++ +  Y RL+PCP  + PPRIEH+V  ED    D+IS+ L LPPLYVADLI+FGAV+Y
Sbjct:  67 ATAAYPVYGRLLPCPLQDDPPRIEHLVAREDEVAVDFISRSLTLPPLYVADLIKFGAVYY 126

Query: 356 ALVCPKPPLTATPEQIKLFKEVTSPSVLSKRTSIKGKTVREAQKTFRVTHVNQFVEAGTY 535
           ALV P+PP  A PE +++F+EVT PSVL +R SIKGKTVREAQKTFRVT  NQ +EAGTY
Sbjct: 127 ALVAPQPPPHAAPEHVRIFREVTEPSVLCRRKSIKGKTVREAQKTFRVTDPNQRLEAGTY 186

Query: 536 LRVHVHPKRSPRCYEIDWKSRVIAVTDSYVVLDKPAGTTVGGTTDNIEESCATFASRALD 715
           LRVHVHPKR PRCYEIDWKSRVIAVTD+YVVLDKPA T+VGG TDNIEESC  F SRAL 
Sbjct: 187 LRVHVHPKRFPRCYEIDWKSRVIAVTDNYVVLDKPAATSVGGATDNIEESCVVFTSRALG 246

Query: 716 LAEPLKTTHQIDNCTEDCVIFARTKEYCSVFHTKIRNKEVKTHQIRAQLAACGAPL 883
           L  PL TTHQIDNC+E CV+ ++TKE+CSVFH  IR K+V     +  LA   AP+
Sbjct: 247 LETPLMTTHQIDNCSEGCVVLSKTKEFCSVFHGMIREKQVN----KRYLALTTAPV 298


 Score =  119 bits (297), Expect = 6e-026
 Identities = 58/115 (50%), Positives = 76/115 (66%), Gaps = 1/115 (0%)
 Frame = +2

Query:  800 SVFHTKIRNKEVKTHQIRAQLAACGAPLVGDSMYMPAAIAETVSPGINPYGKGNEHCTME 979
            + +  KI     KTHQIRAQLAA G P+VGDS YM AA+A  V+P INP+G+  ++    
Sbjct:  361 AAYECKINLLTGKTHQIRAQLAAIGTPIVGDSAYMTAAMAAIVNPSINPFGRWGQNYD-S 419

Query:  980 ENDKETAVFEWIERHGKEPKVGIGFQACQISWEDDDGEHFYEAGTPWWR*NTIDS 1144
            E++K  AV  WI  HGKEPK  IG QA +ISW+ +   H Y+AG PWWR + ++S
Sbjct:  420 EDEKAAAVEAWISCHGKEPKSVIGLQASEISWDYEGEHHSYKAGVPWWRQDAVES 474

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,533,745,664
Number of Sequences: 518415
Number of Extensions: 12533745664
Number of Successful Extensions: 80211091
Number of sequences better than 0.0: 0