BLASTX 7.6.2
Query= UN03280 /QuerySize=741
(740 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15226690|ref|NP_181581.1| Uroporphyrinogen decarboxylase 2 [A... 360 1e-097
gi|14334768|gb|AAK59562.1| putative uroporphyrinogen decarboxyla... 360 1e-097
gi|297823981|ref|XP_002879873.1| hypothetical protein ARALYDRAFT... 357 9e-097
gi|255559645|ref|XP_002520842.1| uroporphyrinogen decarboxylase,... 280 1e-073
gi|225448635|ref|XP_002274385.1| PREDICTED: similar to Uroporphy... 279 3e-073
gi|297736517|emb|CBI25388.3| unnamed protein product [Vitis vini... 279 3e-073
gi|217072424|gb|ACJ84572.1| unknown [Medicago truncatula] 278 7e-073
gi|2501647|sp|Q42967.1|DCUP_TOBAC RecName: Full=Uroporphyrinogen... 278 9e-073
gi|255639814|gb|ACU20200.1| unknown [Glycine max] 276 3e-072
gi|326490007|dbj|BAJ94077.1| predicted protein [Hordeum vulgare ... 272 5e-071
gi|16975230|pdb|1J93|A Chain A, Crystal Structure And Substrate ... 270 2e-070
gi|242041001|ref|XP_002467895.1| hypothetical protein SORBIDRAFT... 268 7e-070
gi|194695764|gb|ACF81966.1| unknown [Zea mays] 264 1e-068
gi|115452897|ref|NP_001050049.1| Os03g0337600 [Oryza sativa Japo... 261 8e-068
gi|302761784|ref|XP_002964314.1| hypothetical protein SELMODRAFT... 249 3e-064
gi|302768601|ref|XP_002967720.1| hypothetical protein SELMODRAFT... 247 2e-063
gi|2501646|sp|Q42855.1|DCUP_HORVU RecName: Full=Uroporphyrinogen... 246 4e-063
gi|168033872|ref|XP_001769438.1| predicted protein [Physcomitrel... 245 5e-063
gi|255071125|ref|XP_002507644.1| uroporphyrinogen decarboxylase ... 242 5e-062
gi|162458615|ref|NP_001105610.1| uroporphyrinogen decarboxylase,... 242 7e-062
>gi|15226690|ref|NP_181581.1| Uroporphyrinogen decarboxylase 2 [Arabidopsis
thaliana]
Length = 394
Score = 360 bits (923), Expect = 1e-097
Identities = 187/216 (86%), Positives = 199/216 (92%), Gaps = 3/216 (1%)
Frame = +3
Query: 96 ILQLSSSSLSYPNVLSISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAV 275
ILQ+S+SSLS +LSISPRKSLSS+ S R +RCSVEGTTVTERKVSAT+EPLLLRAV
Sbjct: 3 ILQVSTSSLSSSTLLSISPRKSLSST--KSCRIVRCSVEGTTVTERKVSATSEPLLLRAV 60
Query: 276 KGELVDRPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVI 455
KGE+VDRPPVWLMRQAGRYMKSYQ LCEKYP FRDRSENADLVVEISLQPWKVFKPDGVI
Sbjct: 61 KGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWKVFKPDGVI 120
Query: 456 LFSDILTPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRN 635
LFSDILTPLSGMNIPFDIVKG+GPIIFNPPQSAADV QVREFVPEESVPYVGEAL+RLRN
Sbjct: 121 LFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVREFVPEESVPYVGEALRRLRN 180
Query: 636 EVGNEAVVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
EV NEA VLGFVGAPFTLSSYVIE + +FTQIK+
Sbjct: 181 EVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKR 216
>gi|14334768|gb|AAK59562.1| putative uroporphyrinogen decarboxylase [Arabidopsis
thaliana]
Length = 394
Score = 360 bits (923), Expect = 1e-097
Identities = 187/216 (86%), Positives = 199/216 (92%), Gaps = 3/216 (1%)
Frame = +3
Query: 96 ILQLSSSSLSYPNVLSISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAV 275
ILQ+S+SSLS +LSISPRKSLSS+ S R +RCSVEGTTVTERKVSAT+EPLLLRAV
Sbjct: 3 ILQVSTSSLSSSTLLSISPRKSLSST--KSCRIVRCSVEGTTVTERKVSATSEPLLLRAV 60
Query: 276 KGELVDRPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVI 455
KGE+VDRPPVWLMRQAGRYMKSYQ LCEKYP FRDRSENADLVVEISLQPWKVFKPDGVI
Sbjct: 61 KGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWKVFKPDGVI 120
Query: 456 LFSDILTPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRN 635
LFSDILTPLSGMNIPFDIVKG+GPIIFNPPQSAADV QVREFVPEESVPYVGEAL+RLRN
Sbjct: 121 LFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVAQVREFVPEESVPYVGEALRRLRN 180
Query: 636 EVGNEAVVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
EV NEA VLGFVGAPFTLSSYVIE + +FTQIK+
Sbjct: 181 EVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKR 216
>gi|297823981|ref|XP_002879873.1| hypothetical protein ARALYDRAFT_903342
[Arabidopsis lyrata subsp. lyrata]
Length = 394
Score = 357 bits (916), Expect = 9e-097
Identities = 187/216 (86%), Positives = 200/216 (92%), Gaps = 3/216 (1%)
Frame = +3
Query: 96 ILQLSSSSLSYPNVLSISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAV 275
ILQ+S+SSLS +LSISPRKSL SSPK S R +RCSVEGTTVTERKVSA +EPLLLRAV
Sbjct: 3 ILQVSTSSLSSSILLSISPRKSL-SSPK-SCRIVRCSVEGTTVTERKVSAISEPLLLRAV 60
Query: 276 KGELVDRPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVI 455
KGE+VDRPPVWLMRQAGRYMKSYQ LCEKYP FRDRSENADLVVEISLQPWKVFKPDGVI
Sbjct: 61 KGEVVDRPPVWLMRQAGRYMKSYQTLCEKYPSFRDRSENADLVVEISLQPWKVFKPDGVI 120
Query: 456 LFSDILTPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRN 635
LFSDILTPLSGMNIPFDIVKG+GPIIFNPPQSAADV+QVREF+PEESVPYVGEAL+RLRN
Sbjct: 121 LFSDILTPLSGMNIPFDIVKGKGPIIFNPPQSAADVDQVREFIPEESVPYVGEALRRLRN 180
Query: 636 EVGNEAVVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
EV NEA VLGFVGAPFTLSSYVIE + +FTQIK+
Sbjct: 181 EVNNEAAVLGFVGAPFTLSSYVIEGGSSKNFTQIKR 216
>gi|255559645|ref|XP_002520842.1| uroporphyrinogen decarboxylase, putative
[Ricinus communis]
Length = 389
Score = 280 bits (716), Expect = 1e-073
Identities = 148/210 (70%), Positives = 170/210 (80%), Gaps = 7/210 (3%)
Frame = +3
Query: 114 SSLSYPNVLSISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAVKGELVD 293
SS+S + L SPRKS+S P I CS+ G TV E K ++ EPLLL AV+GE V+
Sbjct: 8 SSISSFSTLYSSPRKSVSKPP-----IIHCSLPG-TVAEPKPASVAEPLLLNAVRGEDVE 61
Query: 294 RPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDIL 473
RPPVWLMRQAGRYMKSYQ +CEKYP FR+RSEN DLVVEISLQPW VFKPDGVILFSDIL
Sbjct: 62 RPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWNVFKPDGVILFSDIL 121
Query: 474 TPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNEA 653
TPLSGMNIPFDIVKG+GPIIFNP ++A DV+QVREFVPEESVPYVGE+L LR EV N+A
Sbjct: 122 TPLSGMNIPFDIVKGKGPIIFNPLRTAEDVDQVREFVPEESVPYVGESLTILRKEVDNKA 181
Query: 654 VVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
VLGFVGAPFTL+SY +E + F++IK+
Sbjct: 182 AVLGFVGAPFTLASYCVEGGSSKHFSKIKR 211
>gi|225448635|ref|XP_002274385.1| PREDICTED: similar to Uroporphyrinogen
decarboxylase, chloroplastic [Vitis vinifera]
Length = 459
Score = 279 bits (713), Expect = 3e-073
Identities = 149/211 (70%), Positives = 171/211 (81%), Gaps = 3/211 (1%)
Frame = +3
Query: 111 SSSLSYPNVLSISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAVKGELV 290
SSS+S + LS S R S S SP +S I C++ G TV E + TEPLLL AV+GE V
Sbjct: 6 SSSISSFSALSTSLR-SRSPSPSNSKPRIYCAL-GGTVAEPIIINATEPLLLTAVRGEDV 63
Query: 291 DRPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDI 470
+RPPVWLMRQAGRYMKSYQ +CEKYP FR+RSEN DLVVEISLQPWKVFKPDGVILFSDI
Sbjct: 64 ERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDI 123
Query: 471 LTPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNE 650
LTPLSGMNIPFDI+KG+GP+IFNP ++A DV QVREFVPE+SVPYVGEAL LR EV N
Sbjct: 124 LTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREFVPEDSVPYVGEALTILRKEVDNA 183
Query: 651 AVVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
A VLGFVGAPFTL+SYV+E + F++IK+
Sbjct: 184 AAVLGFVGAPFTLASYVVEGGSSKHFSKIKR 214
>gi|297736517|emb|CBI25388.3| unnamed protein product [Vitis vinifera]
Length = 392
Score = 279 bits (713), Expect = 3e-073
Identities = 149/211 (70%), Positives = 171/211 (81%), Gaps = 3/211 (1%)
Frame = +3
Query: 111 SSSLSYPNVLSISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAVKGELV 290
SSS+S + LS S R S S SP +S I C++ G TV E + TEPLLL AV+GE V
Sbjct: 6 SSSISSFSALSTSLR-SRSPSPSNSKPRIYCAL-GGTVAEPIIINATEPLLLTAVRGEDV 63
Query: 291 DRPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDI 470
+RPPVWLMRQAGRYMKSYQ +CEKYP FR+RSEN DLVVEISLQPWKVFKPDGVILFSDI
Sbjct: 64 ERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDI 123
Query: 471 LTPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNE 650
LTPLSGMNIPFDI+KG+GP+IFNP ++A DV QVREFVPE+SVPYVGEAL LR EV N
Sbjct: 124 LTPLSGMNIPFDIIKGKGPVIFNPLRTADDVEQVREFVPEDSVPYVGEALTILRKEVDNA 183
Query: 651 AVVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
A VLGFVGAPFTL+SYV+E + F++IK+
Sbjct: 184 AAVLGFVGAPFTLASYVVEGGSSKHFSKIKR 214
>gi|217072424|gb|ACJ84572.1| unknown [Medicago truncatula]
Length = 389
Score = 278 bits (710), Expect = 7e-073
Identities = 142/201 (70%), Positives = 166/201 (82%), Gaps = 2/201 (0%)
Frame = +3
Query: 141 SISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAVKGELVDRPPVWLMRQ 320
SI PRK S+P S ++I+CS+ G V E K + TEPLLL AV+G V+RPPVWLMRQ
Sbjct: 12 SILPRKQHHSTPFSPFKSIQCSLPG-AVAEPKTNNATEPLLLNAVRGLDVERPPVWLMRQ 70
Query: 321 AGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIP 500
AGRYMKSYQ +CEKYP FR+RSEN DLVVEISLQPWKVF+PDGVILFSDILTPLSGMNIP
Sbjct: 71 AGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWKVFQPDGVILFSDILTPLSGMNIP 130
Query: 501 FDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNEAVVLGFVGAP 680
FDIVKG+GP+IF+P SA V+QVREF+PEESVPYVGEAL LR EV N++ VLGFVGAP
Sbjct: 131 FDIVKGKGPVIFDPVHSAGQVDQVREFIPEESVPYVGEALSILRKEVDNKSAVLGFVGAP 190
Query: 681 FTLSSYVIE-VAHLDFTQIKK 740
FTL+SYV+E + F++IK+
Sbjct: 191 FTLASYVVEGGSSKHFSKIKR 211
>gi|2501647|sp|Q42967.1|DCUP_TOBAC RecName: Full=Uroporphyrinogen decarboxylase,
chloroplastic; Short=UPD; Short=URO-D; Flags: Precursor
Length = 391
Score = 278 bits (709), Expect = 9e-073
Identities = 146/205 (71%), Positives = 170/205 (82%), Gaps = 6/205 (2%)
Frame = +3
Query: 141 SISP-RKSLSSSPKS---SSRTIRCSVEGTTVTERKVSATTEPLLLRAVKGELVDRPPVW 308
SISP KS +SP + + R I CS G TV E K T+PLLL AV+G+ V+RPPVW
Sbjct: 10 SISPSSKSAFTSPSNFNLNPRLICCSA-GGTVAEPKAINATQPLLLDAVRGKEVERPPVW 68
Query: 309 LMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSG 488
LMRQAGRYMKSYQ LCEKYPLFRDRSEN DLVVEISLQPWKVF+PDGVILFSDILTPLSG
Sbjct: 69 LMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQPWKVFRPDGVILFSDILTPLSG 128
Query: 489 MNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNEAVVLGF 668
MNIPFDI+KG+GP+IF+P ++AADV +VREF+PE+SVPYVGEAL LR EV N+A VLGF
Sbjct: 129 MNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTILRKEVNNQAAVLGF 188
Query: 669 VGAPFTLSSYVIE-VAHLDFTQIKK 740
VGAPFTL+SYV+E + +FT+IK+
Sbjct: 189 VGAPFTLASYVVEGGSSKNFTKIKR 213
>gi|255639814|gb|ACU20200.1| unknown [Glycine max]
Length = 387
Score = 276 bits (705), Expect = 3e-072
Identities = 141/201 (70%), Positives = 165/201 (82%), Gaps = 2/201 (0%)
Frame = +3
Query: 141 SISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAVKGELVDRPPVWLMRQ 320
S PRKS+ S+ I C+++G TV E K +A EPLLL AV+G V+RPPVWLMRQ
Sbjct: 10 SFLPRKSICFFSSKSTTPISCTLQG-TVAEPKSTAAGEPLLLNAVRGIDVERPPVWLMRQ 68
Query: 321 AGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIP 500
AGRYMKSYQ +CEKYP FR+RSEN DLVVEISLQPW VFKPDGVILFSDILTPLSGMNIP
Sbjct: 69 AGRYMKSYQTICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLSGMNIP 128
Query: 501 FDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNEAVVLGFVGAP 680
FDIVKG+GP+IF+P +AA V+QVREF+PEESVPYVGEAL LR EV N+A VLGFVGAP
Sbjct: 129 FDIVKGKGPVIFDPIHTAAQVDQVREFIPEESVPYVGEALTILRKEVDNKAAVLGFVGAP 188
Query: 681 FTLSSYVIE-VAHLDFTQIKK 740
FTL+SYV+E + +F++IK+
Sbjct: 189 FTLASYVVEGGSSKNFSKIKR 209
>gi|326490007|dbj|BAJ94077.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 395
Score = 272 bits (694), Expect = 5e-071
Identities = 136/185 (73%), Positives = 158/185 (85%), Gaps = 2/185 (1%)
Frame = +3
Query: 192 TIRCSVEGTTVTERKVSATT-EPLLLRAVKGELVDRPPVWLMRQAGRYMKSYQNLCEKYP 368
+IRCS G V E V+ T EPLL+ A+KG+ V+RPPVWLMRQAGRYMKSYQNLCEKYP
Sbjct: 33 SIRCSAVGEAVAEAAVAGTAEEPLLVSAIKGKKVERPPVWLMRQAGRYMKSYQNLCEKYP 92
Query: 369 LFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGQGPIIFNPPQ 548
LFR+RSEN DLVVEISLQPWKVFKPDGVILFSDILTPL GMNIPFDIVKG+GP+I++P +
Sbjct: 93 LFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPGMNIPFDIVKGKGPVIYDPLR 152
Query: 549 SAADVNQVREFVPEESVPYVGEALKRLRNEVGNEAVVLGFVGAPFTLSSYVIE-VAHLDF 725
+AA VN+VREFVPEE VPYVG+AL LR EV NEA VLGFVGAPFTL+SY +E + +F
Sbjct: 153 TAAAVNEVREFVPEEWVPYVGQALNLLRGEVKNEAAVLGFVGAPFTLASYCVEGGSSKNF 212
Query: 726 TQIKK 740
++IK+
Sbjct: 213 SKIKR 217
>gi|16975230|pdb|1J93|A Chain A, Crystal Structure And Substrate Binding
Modeling Of The Uroporphyrinogen-Iii Decarboxylase From Nicotiana
Tabacum: Implications For The Catalytic Mechanism
Length = 353
Score = 270 bits (688), Expect = 2e-070
Identities = 133/175 (76%), Positives = 154/175 (88%), Gaps = 1/175 (0%)
Frame = +3
Query: 219 TVTERKVSATTEPLLLRAVKGELVDRPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENAD 398
TV E K T+PLLL AV+G+ V+RPPVWLMRQAGRYMKSYQ LCEKYPLFRDRSEN D
Sbjct: 1 TVAEPKAINATQPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVD 60
Query: 399 LVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVRE 578
LVVEISLQPWKVF+PDGVILFSDILTPLSGMNIPFDI+KG+GP+IF+P ++AADV +VRE
Sbjct: 61 LVVEISLQPWKVFRPDGVILFSDILTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVRE 120
Query: 579 FVPEESVPYVGEALKRLRNEVGNEAVVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
F+PE+SVPYVGEAL LR EV N+A VLGFVGAPFTL+SYV+E + +FT+IK+
Sbjct: 121 FIPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEGGSSKNFTKIKR 175
>gi|242041001|ref|XP_002467895.1| hypothetical protein SORBIDRAFT_01g036030
[Sorghum bicolor]
Length = 394
Score = 268 bits (684), Expect = 7e-070
Identities = 136/209 (65%), Positives = 160/209 (76%), Gaps = 2/209 (0%)
Frame = +3
Query: 120 LSYPNVLSISPRKSLSSSPKSSSRTIRCSVEGTTVTER-KVSATTEPLLLRAVKGELVDR 296
LS P+ R + + + +RCS G V E + EPLL+ A++G VDR
Sbjct: 8 LSLPSTSLFRGRSARAGPRRRQLSAVRCSAVGEAVVEEASLGTAEEPLLVSAIRGRKVDR 67
Query: 297 PPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDILT 476
PPVWLMRQAGRYMKSYQ+LCE+YP FR+RSEN DLVVEISLQPWKVFKPDGVILFSDILT
Sbjct: 68 PPVWLMRQAGRYMKSYQSLCERYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILT 127
Query: 477 PLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNEAV 656
PL GMNIPFDIVKG+GP+I++P ++AA VN+VREFVPEE VPYVG+AL LR EV NEA
Sbjct: 128 PLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNLLREEVKNEAA 187
Query: 657 VLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
VLGFVGAPFTL+SY +E + +FT IKK
Sbjct: 188 VLGFVGAPFTLASYCVEGGSSKNFTMIKK 216
>gi|194695764|gb|ACF81966.1| unknown [Zea mays]
Length = 394
Score = 264 bits (673), Expect = 1e-068
Identities = 136/209 (65%), Positives = 159/209 (76%), Gaps = 2/209 (0%)
Frame = +3
Query: 120 LSYPNVLSISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATT-EPLLLRAVKGELVDR 296
LS P+ R + + + +RCS G V E T EPLL+ A++G V+R
Sbjct: 8 LSLPSTSLFRGRSARAGPRRRQLTAVRCSAVGEAVVEEASPRTAEEPLLVSAIRGRKVER 67
Query: 297 PPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDILT 476
PPVWLMRQAGRYMKSYQ LCE+YP FR+RSEN DLVVEISLQPWKVFKPDGVILFSDILT
Sbjct: 68 PPVWLMRQAGRYMKSYQLLCERYPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILT 127
Query: 477 PLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNEAV 656
PL GMNIPFDIVKG+GP+I++P ++AA VN+VREFVPEE VPYVG+AL LR EV NEA
Sbjct: 128 PLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNILRQEVKNEAA 187
Query: 657 VLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
VLGFVGAPFTL+SY +E + +FT IKK
Sbjct: 188 VLGFVGAPFTLASYCVEGGSSKNFTLIKK 216
>gi|115452897|ref|NP_001050049.1| Os03g0337600 [Oryza sativa Japonica Group]
Length = 390
Score = 261 bits (666), Expect = 8e-068
Identities = 135/205 (65%), Positives = 159/205 (77%), Gaps = 4/205 (1%)
Frame = +3
Query: 138 LSISPR--KSLSSSPKSSSRTIRCSVEGTTVTE-RKVSATTEPLLLRAVKGELVDRPPVW 308
LS+ P S+ + +RCS G + E V EPLL+ A+KG V+RPPVW
Sbjct: 8 LSLQPAYLSGRSARARRPPPAVRCSAVGEVMAETAAVGTAEEPLLVSAIKGRKVERPPVW 67
Query: 309 LMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSG 488
LMRQAGRYMKSYQ LCE++P FR+RSEN DLVVEISLQPWKVFKPDGVILFSDILTPL G
Sbjct: 68 LMRQAGRYMKSYQLLCERHPSFRERSENVDLVVEISLQPWKVFKPDGVILFSDILTPLPG 127
Query: 489 MNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNEAVVLGF 668
MNIPFDIVKG+GP+IF+P ++AA VN+VREFVPEE VPYVG+AL LR EV NEA VLGF
Sbjct: 128 MNIPFDIVKGKGPVIFDPLRTAAAVNEVREFVPEEWVPYVGQALNILREEVNNEAAVLGF 187
Query: 669 VGAPFTLSSYVIE-VAHLDFTQIKK 740
VGAPFTL+SY +E + +F++IKK
Sbjct: 188 VGAPFTLASYCVEGGSSKNFSKIKK 212
>gi|302761784|ref|XP_002964314.1| hypothetical protein SELMODRAFT_438672
[Selaginella moellendorffii]
Length = 393
Score = 249 bits (635), Expect = 3e-064
Identities = 119/181 (65%), Positives = 146/181 (80%)
Frame = +3
Query: 165 SSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAVKGELVDRPPVWLMRQAGRYMKSY 344
SS P ++ T +++++ A +PLLLRAV+G+ V+RPPVW+MRQAGRYMKSY
Sbjct: 23 SSRPSRIQCSVVADAATATDSQQELRAGADPLLLRAVRGDSVERPPVWMMRQAGRYMKSY 82
Query: 345 QNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGQG 524
Q+LC KYP FR+RSENA+L +EISLQPWK F+PDGVILFSDILTPL+GMNIPFDI+ G+G
Sbjct: 83 QDLCAKYPSFRERSENAELAIEISLQPWKAFRPDGVILFSDILTPLTGMNIPFDILAGKG 142
Query: 525 PIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNEAVVLGFVGAPFTLSSYVI 704
P+I P S ADV++V E PEE+VPYVG+AL LR EVGNEA VLGFVGAPFTL+SY+I
Sbjct: 143 PVIHKPITSMADVDEVTELCPEEAVPYVGQALSSLRAEVGNEAAVLGFVGAPFTLASYII 202
Query: 705 E 707
E
Sbjct: 203 E 203
>gi|302768601|ref|XP_002967720.1| hypothetical protein SELMODRAFT_408952
[Selaginella moellendorffii]
Length = 384
Score = 247 bits (628), Expect = 2e-063
Identities = 116/169 (68%), Positives = 141/169 (83%)
Frame = +3
Query: 201 CSVEGTTVTERKVSATTEPLLLRAVKGELVDRPPVWLMRQAGRYMKSYQNLCEKYPLFRD 380
C +++++ A +PLLLRAV+G+ V+RPPVW+MRQAGRYMKSYQ+LC KYP FR+
Sbjct: 26 CGYSDGLDSQQELRAGADPLLLRAVRGDSVERPPVWMMRQAGRYMKSYQDLCAKYPSFRE 85
Query: 381 RSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGQGPIIFNPPQSAAD 560
RSENA+L +EISLQPWK F+PDGVILFSDILTPL+GMNIPFDI+ G+GP+I P S AD
Sbjct: 86 RSENAELAIEISLQPWKAFRPDGVILFSDILTPLTGMNIPFDILAGKGPVIHKPITSMAD 145
Query: 561 VNQVREFVPEESVPYVGEALKRLRNEVGNEAVVLGFVGAPFTLSSYVIE 707
V++V E PEE+VPYVG+AL LR EVGNEA VLGFVGAPFTL+SY+IE
Sbjct: 146 VDEVTELCPEEAVPYVGQALSSLRAEVGNEAAVLGFVGAPFTLASYIIE 194
>gi|2501646|sp|Q42855.1|DCUP_HORVU RecName: Full=Uroporphyrinogen decarboxylase;
Short=UPD; Short=URO-D
Length = 330
Score = 246 bits (626), Expect = 4e-063
Identities = 120/152 (78%), Positives = 137/152 (90%), Gaps = 1/152 (0%)
Frame = +3
Query: 288 VDRPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSD 467
V+RPPVWLMRQAGRYMKSYQNLCEKYPLFR+RSEN DLVVEISLQPWKVFKPDGVILFSD
Sbjct: 1 VERPPVWLMRQAGRYMKSYQNLCEKYPLFRERSENVDLVVEISLQPWKVFKPDGVILFSD 60
Query: 468 ILTPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGN 647
ILTPL GMNIPFDIVKG+GP+I++P ++AA VN+VREFVPEE VPYVG+AL LR EV N
Sbjct: 61 ILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNLLRGEVKN 120
Query: 648 EAVVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
EA VLGFVGAPFTL+SY +E + +F++IK+
Sbjct: 121 EAAVLGFVGAPFTLASYCVEGGSSKNFSKIKR 152
>gi|168033872|ref|XP_001769438.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 411
Score = 245 bits (625), Expect = 5e-063
Identities = 119/169 (70%), Positives = 143/169 (84%), Gaps = 1/169 (0%)
Frame = +3
Query: 237 VSATTEPLLLRAVKGELVDRPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEIS 416
V +++PLLLRAV+GE VDRPPVW+MRQAGRYMK YQ+LC+K+P FR+RSEN DL VEIS
Sbjct: 64 VDTSSDPLLLRAVRGEEVDRPPVWMMRQAGRYMKVYQDLCQKHPTFRERSENVDLAVEIS 123
Query: 417 LQPWKVFKPDGVILFSDILTPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEES 596
LQPW+ FKPDGVILFSDILTP +GMNIPFDI+K +GPII NP ++AADV +VRE VP E+
Sbjct: 124 LQPWRAFKPDGVILFSDILTPFTGMNIPFDILKTKGPIIHNPIRTAADVAKVRELVPAEA 183
Query: 597 VPYVGEALKRLRNEVGNEAVVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
VPYVG+AL LR EVGN + VLGFVGAPFTL+SY++E + FT IK+
Sbjct: 184 VPYVGQALTALREEVGNASTVLGFVGAPFTLASYIVEGGSSKHFTVIKR 232
>gi|255071125|ref|XP_002507644.1| uroporphyrinogen decarboxylase chloroplast
precursor [Micromonas sp. RCC299]
Length = 391
Score = 242 bits (616), Expect = 5e-062
Identities = 118/187 (63%), Positives = 145/187 (77%), Gaps = 4/187 (2%)
Frame = +3
Query: 147 SPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAVKGELVDRPPVWLMRQAG 326
S R L P + +R I+ G++ + SAT +PL+LRA++GE V+RPP+W+MRQAG
Sbjct: 19 SSRHELVKGPSTRARAIKVE-SGSSAFD---SATNDPLMLRAIRGEKVERPPIWMMRQAG 74
Query: 327 RYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFSDILTPLSGMNIPFD 506
RYMK YQ+LC+++P FR+RSE DL VEISLQPW+ F+PDGVILFSDILTPLSGMNIPFD
Sbjct: 75 RYMKIYQDLCKRHPTFRERSEKVDLAVEISLQPWEAFQPDGVILFSDILTPLSGMNIPFD 134
Query: 507 IVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVGNEAVVLGFVGAPFT 686
IVKG GPII NP +S DV + PE+SVP+VGEAL LR EVGN A VLGFVGAPFT
Sbjct: 135 IVKGTGPIIMNPVRSMEDVKTINALEPEKSVPFVGEALGLLRQEVGNNATVLGFVGAPFT 194
Query: 687 LSSYVIE 707
L+SY++E
Sbjct: 195 LASYIVE 201
>gi|162458615|ref|NP_001105610.1| uroporphyrinogen decarboxylase, chloroplastic
precursor [Zea mays]
Length = 393
Score = 242 bits (615), Expect = 7e-062
Identities = 133/213 (62%), Positives = 153/213 (71%), Gaps = 11/213 (5%)
Frame = +3
Query: 120 LSYPNVLSISPRKSLSSSPKSSSRTIRCSVEGTTVTERKVSATTEPLLLRAVKGEL---- 287
LS P+ R + + SSR +ER+ P RA GE
Sbjct: 8 LSLPSTSLFRGRSARAGPNAGSSRP-----SAAAPSERRSWRRPRPDGGRAAAGERNQRE 62
Query: 288 -VDRPPVWLMRQAGRYMKSYQNLCEKYPLFRDRSENADLVVEISLQPWKVFKPDGVILFS 464
V+RPPVWLMRQAGRYMKSYQ LCE+YP FR+RSEN DLVVEISLQPWKVFKPDGVILFS
Sbjct: 63 EVERPPVWLMRQAGRYMKSYQLLCERYPSFRERSENVDLVVEISLQPWKVFKPDGVILFS 122
Query: 465 DILTPLSGMNIPFDIVKGQGPIIFNPPQSAADVNQVREFVPEESVPYVGEALKRLRNEVG 644
DILTPL GMNIPFDIVKG+GP+I++P ++AA VN+VREFVPEE VPYVG+AL LR EV
Sbjct: 123 DILTPLPGMNIPFDIVKGKGPVIYDPLRTAAAVNEVREFVPEEWVPYVGQALNILRQEVK 182
Query: 645 NEAVVLGFVGAPFTLSSYVIE-VAHLDFTQIKK 740
NEA VLGFVGAPFTL+SY +E + +FT IKK
Sbjct: 183 NEAAVLGFVGAPFTLASYCVEGGSSKNFTLIKK 215
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 359,848,489,672
Number of Sequences: 15229318
Number of Extensions: 359848489672
Number of Successful Extensions: 91916522
Number of sequences better than 0.0: 0
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