BLASTX 7.6.2
Query= UN03324 /QuerySize=1935
(1934 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||ATCG00670.1 | Symbols: CLPP1, PCLPP | Encodes the... 383 2e-106
TAIR9_protein||ATCG01240.1 | Symbols: RPS7.2 | 30S chloroplast r... 303 3e-082
TAIR9_protein||ATCG00900.1 | Symbols: RPS7.1, RPS7 | encodes a c... 303 3e-082
TAIR9_protein||ATCG00065.1 | Symbols: RPS12A, RPS12 | chloroplas... 251 1e-066
TAIR9_protein||ATCG01230.1 | Symbols: RPS12B, RPS12 | chloroplas... 251 1e-066
TAIR9_protein||ATCG00905.1 | Symbols: RPS12C, RPS12 | chloroplas... 251 1e-066
TAIR9_protein||AT1G12410.1 | Symbols: CLPR2, NCLPP2, CLP2 | CLP2... 161 2e-039
TAIR9_protein||AT2G07675.1 | Symbols: | ribosomal protein S12 m... 151 2e-036
TAIR9_protein||AT5G23140.1 | Symbols: CLPP2, NCLPP7 | NCLPP7 (NU... 151 2e-036
TAIR9_protein||ATMG00980.1 | Symbols: RPSL2 | ribosomal protein ... 151 2e-036
TAIR9_protein||AT1G02560.1 | Symbols: CLPP5, NCLPP5, NCLPP1 | CL... 146 6e-035
TAIR9_protein||AT1G66670.1 | Symbols: CLPP3, NCLPP3 | CLPP3; ser... 135 1e-031
TAIR9_protein||AT5G45390.1 | Symbols: CLPP4, NCLPP4 | CLPP4 (CLP... 131 2e-030
TAIR9_protein||AT1G11750.1 | Symbols: CLPP6, NCLPP1, NCLPP6 | CL... 129 1e-029
TAIR9_protein||AT4G17040.1 | Symbols: | ATP-dependent Clp prote... 77 3e-014
TAIR9_protein||AT2G07696.1 | Symbols: | ribosomal protein S7 fa... 76 6e-014
TAIR9_protein||ATMG01270.1 | Symbols: RPS7 | encodes a mitochond... 76 6e-014
TAIR9_protein||AT1G09130.1 | Symbols: | ATP-dependent Clp prote... 74 2e-013
TAIR9_protein||AT1G09130.2 | Symbols: | ATP-dependent Clp prote... 74 2e-013
>TAIR9_protein||ATCG00670.1 | Symbols: CLPP1, PCLPP | Encodes the only ClpP
(caseinolytic protease) encoded within the plastid genome. Contains a
highly conserved catalytic triad of Ser-type proteases (Ser-His-Asp).
Part of the 350 kDa chloroplast Clp complex. The name reflects
nomenclature described in Adam et. al (2001). | chrC:69910-71882
REVERSE
Length = 197
Score = 383 bits (983), Expect = 2e-106
Identities = 192/197 (97%), Positives = 194/197 (98%)
Frame = +3
Query: 6 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 185
MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 186 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPH 365
KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGG ITKRIAFPH
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 366 ARVMIHQPASSFYEAQTGEVILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 545
ARVMIHQPASSFYEAQTGE ILEAEELLKLRETITRVYVQRTGKPIWV+SEDMERDVFMS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180
Query: 546 ATEAQAYGIVDLVAVQ* 596
ATEAQA+GIVDLVAVQ*
Sbjct: 181 ATEAQAHGIVDLVAVQ* 197
>TAIR9_protein||ATCG01240.1 | Symbols: RPS7.2 | 30S chloroplast ribosomal
protein S7 | chrC:140704-141171 FORWARD
Length = 156
Score = 303 bits (775), Expect = 3e-082
Identities = 155/156 (99%)
Frame = +3
Query: 1203 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 1382
MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS
Sbjct: 1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60
Query: 1383 VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 1562
VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61 VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
Query: 1563 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR* 1670
SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR*
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR* 156
>TAIR9_protein||ATCG00900.1 | Symbols: RPS7.1, RPS7 | encodes a chloroplast
ribosomal protein S7, a constituent of the small subunit of the
ribosomal complex | chrC:97478-97945 REVERSE
Length = 156
Score = 303 bits (775), Expect = 3e-082
Identities = 155/156 (99%)
Frame = +3
Query: 1203 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 1382
MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS
Sbjct: 1 MSRRGTAEEKTAKSDPIYRNRLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLS 60
Query: 1383 VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 1562
VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL
Sbjct: 61 VLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKL 120
Query: 1563 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR* 1670
SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR*
Sbjct: 121 SSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR* 156
>TAIR9_protein||ATCG00065.1 | Symbols: RPS12A, RPS12 | chloroplast gene encoding
ribosomal protein s12. The gene is located in three distinct loci on
the chloroplast genome and is transpliced to make one transcript. |
chrC:69611-69724 REVERSE
Length = 124
Score = 251 bits (640), Expect = 1e-066
Identities = 123/124 (99%)
Frame = +1
Query: 778 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG 957
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG 60
Query: 958 FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK 1137
FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK
Sbjct: 61 FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK 120
Query: 1138 KPK* 1149
KPK*
Sbjct: 121 KPK* 124
>TAIR9_protein||ATCG01230.1 | Symbols: RPS12B, RPS12 | chloroplast gene encoding
ribosomal protein s12. The gene is located in three distinct loci on
the chloroplast genome and is transpliced to make one transcript. |
chrC:139856-140650 FORWARD
Length = 124
Score = 251 bits (640), Expect = 1e-066
Identities = 123/124 (99%)
Frame = +1
Query: 778 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG 957
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG 60
Query: 958 FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK 1137
FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK
Sbjct: 61 FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK 120
Query: 1138 KPK* 1149
KPK*
Sbjct: 121 KPK* 124
>TAIR9_protein||ATCG00905.1 | Symbols: RPS12C, RPS12 | chloroplast gene encoding
ribosomal protein s12. The gene is located in three distinct loci on
the chloroplast genome and is transpliced to make one transcript. |
chrC:97999-98793 REVERSE
Length = 124
Score = 251 bits (640), Expect = 1e-066
Identities = 123/124 (99%)
Frame = +1
Query: 778 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG 957
MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG
Sbjct: 1 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG 60
Query: 958 FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK 1137
FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK
Sbjct: 61 FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK 120
Query: 1138 KPK* 1149
KPK*
Sbjct: 121 KPK* 124
>TAIR9_protein||AT1G12410.1 | Symbols: CLPR2, NCLPP2, CLP2 | CLP2 (CLP PROTEASE
PROTEOLYTIC SUBUNIT 2); serine-type endopeptidase |
chr1:4223099-4224954 FORWARD
Length = 280
Score = 161 bits (406), Expect = 2e-039
Identities = 78/193 (40%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Frame = +3
Query: 6 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 185
MPIG P+VP+R+ EG WVDI+N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 68 MPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLDDS 127
Query: 186 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPH 365
+ +Y+++N PGG + +AIYDTM+ ++ V T C+GLA ++A F+L GE R A P
Sbjct: 128 RRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAMPL 187
Query: 366 ARVMIHQPASSFYEAQTGEVILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 545
+R+ + PA + Q ++ EA+EL ++R+ + + TG+P V +D+ R +
Sbjct: 188 SRIALQSPAGA-ARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRFN 246
Query: 546 ATEAQAYGIVDLV 584
A EA YG++D +
Sbjct: 247 AEEAIEYGLIDKI 259
>TAIR9_protein||AT2G07675.1 | Symbols: | ribosomal protein S12 mitochondrial
family protein | chr2:3270410-3270787 FORWARD
Length = 126
Score = 151 bits (379), Expect = 2e-036
Identities = 72/123 (58%), Positives = 91/123 (73%)
Frame = +1
Query: 778 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG 957
MPT QLIR+ R+ R ++ AL CPQ+ G C RV T TPKKPNSA RK+A+VRL++
Sbjct: 1 MPTFNQLIRHGREEKRRTDRTRALDKCPQKTGVCPRVSTRTPKKPNSAPRKIAKVRLSNR 60
Query: 958 FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK 1137
+I A+IPG GHN QEHS VL+RGGRVKD PGV+ H +RG D +G+ R++GRSKYG +
Sbjct: 61 HDIFAHIPGEGHNSQEHSTVLIRGGRVKDSPGVKSHCIRGVKDLMGIPGRRRGRSKYGAE 120
Query: 1138 KPK 1146
KPK
Sbjct: 121 KPK 123
>TAIR9_protein||AT5G23140.1 | Symbols: CLPP2, NCLPP7 | NCLPP7 (NUCLEAR-ENCODED
CLP PROTEASE P7); serine-type endopeptidase | chr5:7783811-7784826
FORWARD
Length = 242
Score = 151 bits (379), Expect = 2e-036
Identities = 68/172 (39%), Positives = 121/172 (70%), Gaps = 1/172 (0%)
Frame = +3
Query: 69 DIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIY 248
DI++RL +ER+ + ++ + S+ +++ ++YL E +K +++++NSPGG V +G+AIY
Sbjct: 48 DIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIHMYLNSPGGHVTAGLAIY 107
Query: 249 DTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHARVMIHQPASSFYEAQTGEVI 428
DTMQ++R + TIC+G AAS+AS +L G +R + P+A VMIHQP S Y Q ++
Sbjct: 108 DTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVMIHQP-SGGYSGQAKDIT 166
Query: 429 LEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAYGIVDLV 584
+ ++++++ + + +YV+ TG+P+ VV+ +M+RD FM+ EA+A+GI+D V
Sbjct: 167 IHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAKAFGIIDEV 218
>TAIR9_protein||ATMG00980.1 | Symbols: RPSL2 | ribosomal protein L2 |
chrM:260224-260601 REVERSE
Length = 126
Score = 151 bits (379), Expect = 2e-036
Identities = 72/123 (58%), Positives = 91/123 (73%)
Frame = +1
Query: 778 MPTIKQLIRNTRQPIRNVTKSPALRGCPQRRGTCTRVYTITPKKPNSALRKVARVRLTSG 957
MPT QLIR+ R+ R ++ AL CPQ+ G C RV T TPKKPNSA RK+A+VRL++
Sbjct: 1 MPTFNQLIRHGREEKRRTDRTRALDKCPQKTGVCPRVSTRTPKKPNSAPRKIAKVRLSNR 60
Query: 958 FEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSKYGVK 1137
+I A+IPG GHN QEHS VL+RGGRVKD PGV+ H +RG D +G+ R++GRSKYG +
Sbjct: 61 HDIFAHIPGEGHNSQEHSTVLIRGGRVKDSPGVKSHCIRGVKDLMGIPGRRRGRSKYGAE 120
Query: 1138 KPK 1146
KPK
Sbjct: 121 KPK 123
>TAIR9_protein||AT1G02560.1 | Symbols: CLPP5, NCLPP5, NCLPP1 | CLPP5 (NUCLEAR
ENCODED CLP PROTEASE 5); serine-type endopeptidase | chr1:538000-539805
FORWARD
Length = 299
Score = 146 bits (367), Expect = 6e-035
Identities = 72/191 (37%), Positives = 120/191 (62%), Gaps = 6/191 (3%)
Frame = +3
Query: 21 PKVPFRSPGEGDTSWV-----DIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 185
P P + G+G V I ++L++ R+ G VD +++N +++ ++YL T
Sbjct: 93 PYFPAYAQGQGPPPMVQERFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPT 152
Query: 186 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPH 365
KD+ +++NSPGG V +GMAI+DTM+ +RPDV T+C+GLAAS+ +F+L G KR + P+
Sbjct: 153 KDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPN 212
Query: 366 ARVMIHQPASSFYEAQTGEVILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 545
+R+MIHQP QT ++ ++A E+L + + TG+ + +++D +RD FMS
Sbjct: 213 SRIMIHQPLGGAQGGQT-DIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMS 271
Query: 546 ATEAQAYGIVD 578
A EA+ YG++D
Sbjct: 272 AKEAKEYGLID 282
>TAIR9_protein||AT1G66670.1 | Symbols: CLPP3, NCLPP3 | CLPP3; serine-type
endopeptidase | chr1:24863995-24865646 REVERSE
Length = 310
Score = 135 bits (338), Expect = 1e-031
Identities = 67/173 (38%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Frame = +3
Query: 66 VDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAI 245
+D N L R+R+ FLG +VD ++ +IS ++ L E +D+ LFINSPGG + +GM I
Sbjct: 84 LDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMGI 143
Query: 246 YDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHARVMIHQPASSFYEAQTGEV 425
YD M+ + DV T+C+GLAAS+ +F+L G KR P+++VMIHQP + T E+
Sbjct: 144 YDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKAT-EM 202
Query: 426 ILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAYGIVDLV 584
+ E++ + + +++ + TGKP + D +RD F++ EA+ YG++D V
Sbjct: 203 SIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAV 255
>TAIR9_protein||AT5G45390.1 | Symbols: CLPP4, NCLPP4 | CLPP4 (CLP PROTEASE P4);
serine-type endopeptidase | chr5:18396351-18397586 FORWARD
Length = 293
Score = 131 bits (329), Expect = 2e-030
Identities = 69/170 (40%), Positives = 104/170 (61%), Gaps = 1/170 (0%)
Frame = +3
Query: 69 DIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIY 248
D+ L RER+ FLG +D +++ ++S ++ L + KD+ LFINSPGG + + MAIY
Sbjct: 79 DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPGGSLSATMAIY 138
Query: 249 DTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHARVMIHQPASSFYEAQTGEVI 428
D +Q VR DV TI +G+AAS AS IL G KR A P+ R+MIHQP Q +V
Sbjct: 139 DVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG-ASGQAIDVE 197
Query: 429 LEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAYGIVD 578
++A+E++ + +T + T + V +D++RD +MS EA YG++D
Sbjct: 198 IQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLID 247
>TAIR9_protein||AT1G11750.1 | Symbols: CLPP6, NCLPP1, NCLPP6 | CLPP6;
serine-type endopeptidase | chr1:3967609-3969535 FORWARD
Length = 272
Score = 129 bits (322), Expect = 1e-029
Identities = 63/171 (36%), Positives = 107/171 (62%), Gaps = 1/171 (0%)
Frame = +3
Query: 66 VDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAI 245
+D+ + L+R R+ F+GQ ++ +++ ++IS ++ L+ D D+ +++N PGG S +AI
Sbjct: 95 LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDILMYLNCPGGSTYSVLAI 154
Query: 246 YDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHARVMIHQPASSFYEAQTGEV 425
YD M +++P V T+ G+AAS + +L GGE R A P+ RVMIHQP + +V
Sbjct: 155 YDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVMIHQPQTG-CGGHVEDV 213
Query: 426 ILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAYGIVD 578
+ E ++ R+ I R+Y TG+P+ V + ERD F+SA+EA +G++D
Sbjct: 214 RRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEALEFGLID 264
>TAIR9_protein||AT4G17040.1 | Symbols: | ATP-dependent Clp protease proteolytic
subunit, putative | chr4:9586740-9589297 REVERSE
Length = 306
Score = 77 bits (188), Expect = 3e-014
Identities = 41/122 (33%), Positives = 67/122 (54%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 GWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHARVMIHQPASS 398
G+ AIYD M +V+P + T+C+G A A+ +L G R A P + +MI QP +
Sbjct: 163 GYDTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIAR 222
Query: 399 FYEAQTGEVILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAYGIVD 578
F + Q +V + +E+ ++ + ++Y + GK + DM+R + S TEA YGI+D
Sbjct: 223 F-QGQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIID 281
Query: 579 LV 584
V
Sbjct: 282 KV 283
>TAIR9_protein||AT2G07696.1 | Symbols: | ribosomal protein S7 family protein |
chr2:3351340-3351786 REVERSE
Length = 149
Score = 76 bits (186), Expect = 6e-014
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 10/140 (7%)
Frame = +3
Query: 1266 LVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVG 1445
L+ LVN +K GK++ I+Y+ + +TE + + ++ A+ + P V V
Sbjct: 11 LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PARTERDVIKLMVDAVENIKPICEVAKVGVA 69
Query: 1446 GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAI 1607
G+ + VP + + + LAIRW+L A+ K R +++++S +E++DA + G A
Sbjct: 70 GTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYQKRGSAR 126
Query: 1608 RKKEETHRMAEANRAFAHFR 1667
RK+E H +A NR+FAHFR
Sbjct: 127 RKRENLHGLASTNRSFAHFR 146
>TAIR9_protein||ATMG01270.1 | Symbols: RPS7 | encodes a mitochondrial ribosomal
protein S7, a constituent of the small subunit of the ribosomal complex
| chrM:314627-315073 FORWARD
Length = 149
Score = 76 bits (186), Expect = 6e-014
Identities = 45/140 (32%), Positives = 78/140 (55%), Gaps = 10/140 (7%)
Frame = +3
Query: 1266 LVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVG 1445
L+ LVN +K GK++ I+Y+ + +TE + + ++ A+ + P V V
Sbjct: 11 LIKKLVNFRMKEGKRTRVRAIVYQTFHR-PARTERDVIKLMVDAVENIKPICEVAKVGVA 69
Query: 1446 GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLS------SELVDAAKGSGDAI 1607
G+ + VP + + + LAIRW+L A+ K R +++++S +E++DA + G A
Sbjct: 70 GTIYDVPGIVARDRQQTLAIRWILEAAFK---RRISYRISLEKCSFAEILDAYQKRGSAR 126
Query: 1608 RKKEETHRMAEANRAFAHFR 1667
RK+E H +A NR+FAHFR
Sbjct: 127 RKRENLHGLASTNRSFAHFR 146
>TAIR9_protein||AT1G09130.1 | Symbols: | ATP-dependent Clp protease proteolytic
subunit, putative | chr1:2940063-2942217 REVERSE
Length = 331
Score = 74 bits (181), Expect = 2e-013
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +3
Query: 219 GWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHARVMIHQP-AS 395
G G AIYD++ ++ +V T+C+G A A +L G KR PHA+ MI QP
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP 239
Query: 396 SFYEAQTGEVILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAYGIV 575
S +V++ A+E++ R+ + + + TG + V+ M R +M A +A+ +G++
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299
Query: 576 DLV 584
D +
Sbjct: 300 DRI 302
>TAIR9_protein||AT1G09130.2 | Symbols: | ATP-dependent Clp protease proteolytic
subunit, putative | chr1:2940063-2942217 REVERSE
Length = 331
Score = 74 bits (181), Expect = 2e-013
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +3
Query: 219 GWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPHARVMIHQP-AS 395
G G AIYD++ ++ +V T+C+G A A +L G KR PHA+ MI QP
Sbjct: 180 GMESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVP 239
Query: 396 SFYEAQTGEVILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAYGIV 575
S +V++ A+E++ R+ + + + TG + V+ M R +M A +A+ +G++
Sbjct: 240 SSGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVI 299
Query: 576 DLV 584
D +
Sbjct: 300 DRI 302
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,340,731,947
Number of Sequences: 33410
Number of Extensions: 2340731947
Number of Successful Extensions: 84968550
Number of sequences better than 0.0: 0
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