BLASTX 7.6.2
Query= UN03450 /QuerySize=1346
(1345 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G13220.2 | Symbols: LINC2 | LINC2 (LITTLE NUCL... 379 3e-105
TAIR9_protein||AT1G48400.1 | Symbols: | F-box family protein | ... 59 6e-009
TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-rel... 55 9e-008
TAIR9_protein||AT5G15140.1 | Symbols: | aldose 1-epimerase fami... 54 3e-007
>TAIR9_protein||AT1G13220.2 | Symbols: LINC2 | LINC2 (LITTLE NUCLEI2) |
chr1:4515699-4520071 FORWARD
Length = 1129
Score = 379 bits (972), Expect = 3e-105
Identities = 221/344 (64%), Positives = 249/344 (72%), Gaps = 41/344 (11%)
Frame = -2
Query: 1344 GVLSDLPESSDASDTCNIKKSLGRDASGSGGSRRPNMSILQKCTSILFSPSKRAEHDVDT 1165
GVL+DLP SS+ASD+CNIKKSL DASGSGGSRRP+MSILQKCTSI+FSPSKR EH +D
Sbjct: 794 GVLNDLPGSSNASDSCNIKKSLDGDASGSGGSRRPSMSILQKCTSIIFSPSKRVEHGID- 852
Query: 1164 TGKPEQRPFSSLAVNKETKGEIPLPV--------SSFPDEDEEYTDSRVQETSECSQFSE 1009
TGKPEQR SS+AV ETKGE PLPV SS P+EDEEYTDSRVQETSE SQ SE
Sbjct: 853 TGKPEQRLSSSVAVGMETKGEKPLPVDLRLRPSSSSIPEEDEEYTDSRVQETSEGSQLSE 912
Query: 1008 LQSARRGRGRGRPRKPKPSTNPTSSAKHASPEESSKGEVSGHVSGTSEKTTAGRGGRKRQ 829
QS+R RGRGRPRK KP+ NPTSS KHAS EESSK E+SGHVS TS+KTT G GGRKRQ
Sbjct: 913 FQSSR--RGRGRPRKAKPALNPTSSVKHASLEESSKDELSGHVSVTSKKTTGG-GGRKRQ 969
Query: 828 HAEDTATGGGRRKRQQTAVAVLPQTPGQKRYNLRRNKTVDQVPANVENNAAGGEDDADVA 649
H +DTAT GG+R+RQQT VAVLPQTPGQ+ YNLRR KTVDQVPA+VE+NAA GEDDAD+A
Sbjct: 970 HIDDTAT-GGKRRRQQT-VAVLPQTPGQRHYNLRRKKTVDQVPADVEDNAAAGEDDADIA 1027
Query: 648 PSAPSKDNVEGTSESVVEPLPARRLESSEVRVERVVTVETTTTTATAAANTNVGVSVANA 469
SAPSKD VE E+VVE L ARR+E T +A N V VAN
Sbjct: 1028 ASAPSKDTVE---ETVVETLRARRIE---------------TNADVVSAENNGDVPVANV 1069
Query: 468 EVAANIAMSPAVEDDQTQRRVDENKNEEYEDGNDEEDYEDQDDD 337
E P V +D T DE ++E +D N+E +D DDD
Sbjct: 1070 E--------PTVNED-TNEDGDEEEDEAQDDDNEENQDDDDDDD 1104
Score = 90 bits (221), Expect = 3e-018
Identities = 48/105 (45%), Positives = 60/105 (57%), Gaps = 13/105 (12%)
Frame = -2
Query: 540 TVETTTTTATAAANTNVGVSVANAEVAANIAMSPAVEDDQTQRRVDENKNEEYEDGNDEE 361
TVE T A V +AE ++ ++ V+ NE+ + DEE
Sbjct: 1035 TVEETVVETLRARRIETNADVVSAENNGDVPVA----------NVEPTVNEDTNEDGDEE 1084
Query: 360 DYEDQDDDDD---DDDDDDDDDDDGSPKPGEGSIRKKLWTFLTT* 235
+ E QDDD++ DDDDDDD DDDGSP+PGEGSIRKKLWTFLTT*
Sbjct: 1085 EDEAQDDDNEENQDDDDDDDGDDDGSPRPGEGSIRKKLWTFLTT* 1129
>TAIR9_protein||AT1G48400.1 | Symbols: | F-box family protein |
chr1:17882136-17883855 REVERSE
Length = 514
Score = 59 bits (141), Expect = 6e-009
Identities = 22/37 (59%), Positives = 32/37 (86%)
Frame = -2
Query: 405 DENKNEEYEDGNDEEDYEDQDDDDDDDDDDDDDDDDG 295
D++ +++ +D +D++D +D DDDDDDDDDDDDDDDDG
Sbjct: 290 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDG 326
>TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-related |
chr5:25510776-25511456 REVERSE
Length = 227
Score = 55 bits (131), Expect = 9e-008
Identities = 22/36 (61%), Positives = 30/36 (83%)
Frame = -2
Query: 405 DENKNEEYEDGNDEEDYEDQDDDDDDDDDDDDDDDD 298
DE+++E+ + DE++ ED+DDDDDDDDDDDDD DD
Sbjct: 70 DEDEDEDADADEDEDEDEDEDDDDDDDDDDDDDADD 105
Score = 55 bits (130), Expect = 1e-007
Identities = 20/45 (44%), Positives = 35/45 (77%)
Frame = -2
Query: 432 EDDQTQRRVDENKNEEYEDGNDEEDYEDQDDDDDDDDDDDDDDDD 298
++D+ + D++ +++ +D +D +D ED DD+DDD+D+DDDDDDD
Sbjct: 84 DEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDD 128
Score = 54 bits (128), Expect = 2e-007
Identities = 21/45 (46%), Positives = 33/45 (73%)
Frame = -2
Query: 432 EDDQTQRRVDENKNEEYEDGNDEEDYEDQDDDDDDDDDDDDDDDD 298
ED+ DE+++E+ +D +D++D +D D DD DDD+DDDD+DD
Sbjct: 73 EDEDADADEDEDEDEDEDDDDDDDDDDDDDADDADDDEDDDDEDD 117
>TAIR9_protein||AT5G15140.1 | Symbols: | aldose 1-epimerase family protein |
chr5:4908686-4910670 FORWARD
Length = 491
Score = 54 bits (127), Expect = 3e-007
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = -2
Query: 432 EDDQTQRRVDENKNEEYEDGNDEEDYEDQDDDDDDDDDDDDDDDDGSPK 286
+DD ++ D+ K+ +D + ++D +D DDDDDDDDDDD+ D D + K
Sbjct: 109 DDDDEKKHKDKKKDGHNDDDDSDDDTDDDDDDDDDDDDDDEVDGDDNEK 157
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,431,558,971
Number of Sequences: 33410
Number of Extensions: 2431558971
Number of Successful Extensions: 90125768
Number of sequences better than 0.0: 0
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