BLASTX 7.6.2
Query= UN03633 /QuerySize=1180
(1179 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18404337|ref|NP_564622.1| RNA-binding S4 domain-containing pr... 494 2e-137
gi|225461477|ref|XP_002282453.1| PREDICTED: hypothetical protein... 428 1e-117
gi|147798253|emb|CAN67613.1| hypothetical protein VITISV_010260 ... 426 6e-117
gi|255642537|gb|ACU21532.1| unknown [Glycine max] 410 3e-112
gi|224114944|ref|XP_002316899.1| predicted protein [Populus tric... 406 4e-111
gi|217074322|gb|ACJ85521.1| unknown [Medicago truncatula] 403 4e-110
gi|212274707|ref|NP_001130102.1| hypothetical protein LOC1001911... 368 1e-099
gi|297597609|ref|NP_001044235.2| Os01g0747700 [Oryza sativa Japo... 365 1e-098
gi|242054411|ref|XP_002456351.1| hypothetical protein SORBIDRAFT... 365 1e-098
gi|218189042|gb|EEC71469.1| hypothetical protein OsI_03722 [Oryz... 364 2e-098
gi|195639066|gb|ACG39001.1| RNA-binding S4 [Zea mays] 363 3e-098
gi|326523405|dbj|BAJ88743.1| predicted protein [Hordeum vulgare ... 357 2e-096
gi|222619243|gb|EEE55375.1| hypothetical protein OsJ_03443 [Oryz... 337 3e-090
gi|116784861|gb|ABK23497.1| unknown [Picea sitchensis] 335 1e-089
gi|255586534|ref|XP_002533905.1| RNA binding protein, putative [... 335 1e-089
gi|297847696|ref|XP_002891729.1| hypothetical protein ARALYDRAFT... 276 7e-072
gi|9454543|gb|AAF87866.1|AC022520_10 Unknown protein [Arabidopsi... 266 8e-069
gi|67923764|ref|ZP_00517228.1| RNA-binding S4 [Crocosphaera wats... 236 5e-060
gi|126654802|ref|ZP_01726336.1| RNA-binding S4 [Cyanothece sp. C... 233 4e-059
gi|159028854|emb|CAO90659.1| unnamed protein product [Microcysti... 231 2e-058
>gi|18404337|ref|NP_564622.1| RNA-binding S4 domain-containing protein
[Arabidopsis thaliana]
Length = 320
Score = 494 bits (1270), Expect = 2e-137
Identities = 252/302 (83%), Positives = 275/302 (91%)
Frame = +3
Query: 132 SSSYSSYLHTTYKPLITNHTILPSSPLLHSALRRCHVAKAMKGDVELLLKGVGDQSVAKE 311
S + SS LHT K LITN +I S PL SALRRC+ A+A+KGDV+ LLKGVGDQ+VAKE
Sbjct: 19 SVAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEAIKGDVDFLLKGVGDQAVAKE 78
Query: 312 VKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVAQGGYPEAERCRISVG 491
VK ILEMARRA+S+REVLHTDFLTPP+VKESVS+L K ADV +VAQGGYPEAERCRIS+G
Sbjct: 79 VKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIVAQGGYPEAERCRISIG 138
Query: 492 HPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGTGITRDKLGDILVQEEKGAQVLI 671
HPD LT+DPDIVAAL ITGNFGFQ CSHGDFLGAILGTGI+R+KLGDIL+QEEKGAQVLI
Sbjct: 139 HPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISREKLGDILIQEEKGAQVLI 198
Query: 672 VPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTNTFKTIEASLRIDAVASAGFKIS 851
VPELVDF+V+ALDKVGNV TCSKIPLLALEY PPRTN+FKT+EASLRIDAVASAGFKIS
Sbjct: 199 VPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKTVEASLRIDAVASAGFKIS 258
Query: 852 RSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIR 1031
RSKLVD+IS DVRVNWA+VTKNGT VKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIR
Sbjct: 259 RSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIR 318
Query: 1032 YL 1037
YL
Sbjct: 319 YL 320
>gi|225461477|ref|XP_002282453.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 321
Score = 428 bits (1099), Expect = 1e-117
Identities = 214/279 (76%), Positives = 247/279 (88%)
Frame = +3
Query: 201 SSPLLHSALRRCHVAKAMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFL 380
S+ L SA CH+A+AMKGD LLKGV D+S + VKHILEMA+RA++RREVLHTDFL
Sbjct: 43 STHLNSSASGMCHLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRASARREVLHTDFL 102
Query: 381 TPPVVKESVSVLGKLADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGF 560
TPPV+KES+ VL KLAD+ VAQGGYP+AERCR+SVGH + LT PDIVAAL ITGNFGF
Sbjct: 103 TPPVLKESMIVLEKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGF 162
Query: 561 QACSHGDFLGAILGTGITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCS 740
Q+CSHGDFLGAILGTGI R+KLGDI++Q EKGAQVLIVPELVDF+VS+L+KVGNVS +C+
Sbjct: 163 QSCSHGDFLGAILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCT 222
Query: 741 KIPLLALEY*PPRTNTFKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKN 920
K+PLLALEY PRT TFKTIE SLR+DA+ASAGFK+SRSKLVD+IS GDVRVNW +VTKN
Sbjct: 223 KMPLLALEYEEPRTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKN 282
Query: 921 GTTVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIRYL 1037
GTT+KTGDVVSVSGKGRLKIGEIN TKKGK+AVE+IR+L
Sbjct: 283 GTTLKTGDVVSVSGKGRLKIGEINSTKKGKYAVELIRFL 321
>gi|147798253|emb|CAN67613.1| hypothetical protein VITISV_010260 [Vitis
vinifera]
Length = 269
Score = 426 bits (1093), Expect = 6e-117
Identities = 210/268 (78%), Positives = 242/268 (90%)
Frame = +3
Query: 234 CHVAKAMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSV 413
CH+A+AMKGD LLKGV D+S + VKHILEMA+RA++RREVLHTDFLTPPV+KES+ V
Sbjct: 2 CHLAQAMKGDANSLLKGVADRSTIEAVKHILEMAKRASARREVLHTDFLTPPVLKESMIV 61
Query: 414 LGKLADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLGA 593
L KLAD+ VAQGGYP+AERCR+SVGH + LT PDIVAAL ITGNFGFQ+CSHGDFLGA
Sbjct: 62 LEKLADMKAVAQGGYPQAERCRLSVGHSEVLTTAPDIVAALRITGNFGFQSCSHGDFLGA 121
Query: 594 ILGTGITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*P 773
ILGTGI R+KLGDI++Q EKGAQVLIVPELVDF+VS+L+KVGNVS +C+K+PLLALEY
Sbjct: 122 ILGTGIAREKLGDIILQGEKGAQVLIVPELVDFLVSSLEKVGNVSVSCTKMPLLALEYEE 181
Query: 774 PRTNTFKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVS 953
PRT TFKTIE SLR+DA+ASAGFK+SRSKLVD+IS GDVRVNW +VTKNGTT+KTGDVVS
Sbjct: 182 PRTTTFKTIELSLRVDALASAGFKLSRSKLVDLISNGDVRVNWTTVTKNGTTLKTGDVVS 241
Query: 954 VSGKGRLKIGEINETKKGKFAVEIIRYL 1037
VSGKGRLKIGEIN TKKGK+AVE+IR+L
Sbjct: 242 VSGKGRLKIGEINSTKKGKYAVELIRFL 269
>gi|255642537|gb|ACU21532.1| unknown [Glycine max]
Length = 324
Score = 410 bits (1052), Expect = 3e-112
Identities = 195/264 (73%), Positives = 239/264 (90%)
Frame = +3
Query: 246 KAMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKL 425
+A+KG+V+LLLKGVG++SV KEVKHILEMARRA+ +RE+LHTDFLTPPV+KES+ VL KL
Sbjct: 61 QALKGEVDLLLKGVGERSVTKEVKHILEMARRASLKREILHTDFLTPPVLKESMQVLEKL 120
Query: 426 ADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGT 605
ADV +AQGGYP+AERCRISVGHP+ LT+DPDI++AL ITGNF F+ CSHGDFLG+ILGT
Sbjct: 121 ADVKAIAQGGYPQAERCRISVGHPEELTSDPDIISALSITGNFQFEPCSHGDFLGSILGT 180
Query: 606 GITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTN 785
GI R+KLGDI++Q E+GAQ+++VPELV+F++S L KV NV +C+KIPL++L+Y PPRT
Sbjct: 181 GIVREKLGDIILQGEQGAQIIVVPELVEFLMSTLVKVRNVPVSCTKIPLISLDYEPPRTK 240
Query: 786 TFKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGK 965
+FKTIEASLR+DA+ASAGFK+SRSKLVDMIS GDVR+NW VT GTT+K+GD+VS+SGK
Sbjct: 241 SFKTIEASLRVDALASAGFKVSRSKLVDMISNGDVRINWIPVTTKGTTLKSGDIVSISGK 300
Query: 966 GRLKIGEINETKKGKFAVEIIRYL 1037
GRLKIGEIN TKKGKFAVE+IRYL
Sbjct: 301 GRLKIGEINSTKKGKFAVELIRYL 324
>gi|224114944|ref|XP_002316899.1| predicted protein [Populus trichocarpa]
Length = 268
Score = 406 bits (1043), Expect = 4e-111
Identities = 203/268 (75%), Positives = 237/268 (88%), Gaps = 1/268 (0%)
Frame = +3
Query: 234 CHVAKAMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSV 413
CHVA+A KG+V + LKGV D+SV +EVK IL+MARRA+ RREVLHTDFLTPP +KES+ V
Sbjct: 2 CHVAQATKGEV-VALKGVEDKSVIEEVKRILDMARRASLRREVLHTDFLTPPTLKESLHV 60
Query: 414 LGKLADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLGA 593
L KLADV +AQGGYP+AERCR+SVGHP+ LT+DPDIVAAL ITGNFGFQ CSHGDFLGA
Sbjct: 61 LEKLADVKAIAQGGYPQAERCRLSVGHPETLTSDPDIVAALSITGNFGFQLCSHGDFLGA 120
Query: 594 ILGTGITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*P 773
ILGTGI R+KLGDI+V K AQVL+VP+LVD+IVS+LDKVG+VS +C+ IPL A+EY P
Sbjct: 121 ILGTGIARNKLGDIIVLGGKRAQVLLVPDLVDYIVSSLDKVGDVSVSCTPIPLHAIEYEP 180
Query: 774 PRTNTFKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVS 953
PRT +FKT+EASLR+DA+ASAGFKISRSKLVD+IS DVRVNW ++TKN TT+KTGDVVS
Sbjct: 181 PRTKSFKTVEASLRVDALASAGFKISRSKLVDLISNKDVRVNWTTITKNNTTLKTGDVVS 240
Query: 954 VSGKGRLKIGEINETKKGKFAVEIIRYL 1037
VSGKGRLKIGEIN T+KGKFAVE+I YL
Sbjct: 241 VSGKGRLKIGEINTTRKGKFAVELIHYL 268
>gi|217074322|gb|ACJ85521.1| unknown [Medicago truncatula]
Length = 325
Score = 403 bits (1034), Expect = 4e-110
Identities = 192/264 (72%), Positives = 236/264 (89%)
Frame = +3
Query: 246 KAMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKL 425
+A K +V++LLKGVG++SV EVKH+LEMARRA+ +RE+LHT+FLTPPV+KES+ VL KL
Sbjct: 62 QASKREVDVLLKGVGEKSVENEVKHVLEMARRASLKREILHTNFLTPPVLKESMRVLEKL 121
Query: 426 ADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGT 605
AD+ +AQGGYP+AERCRISVGHPD LT+DPD+++AL ITGNF F+ CSHGDFLG+ILGT
Sbjct: 122 ADIKALAQGGYPQAERCRISVGHPDELTSDPDVISALSITGNFQFEPCSHGDFLGSILGT 181
Query: 606 GITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTN 785
GI R+K+GDI++Q E+GAQ+++VPELV+F+ SALDKV NV TC+KIPL++L+Y PPRT
Sbjct: 182 GIAREKVGDIILQGEQGAQIIVVPELVEFLTSALDKVRNVPVTCTKIPLISLDYEPPRTK 241
Query: 786 TFKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGK 965
+FKTIEASLR+DAVASAGFKISRSKLVDMIS GDVR+NW +T GTTVK+GD+VSVSG
Sbjct: 242 SFKTIEASLRVDAVASAGFKISRSKLVDMISNGDVRINWIPITTKGTTVKSGDLVSVSGL 301
Query: 966 GRLKIGEINETKKGKFAVEIIRYL 1037
GRLKIGE+N TKKGKFAVE+IRYL
Sbjct: 302 GRLKIGEVNTTKKGKFAVELIRYL 325
>gi|212274707|ref|NP_001130102.1| hypothetical protein LOC100191195 [Zea mays]
Length = 304
Score = 368 bits (943), Expect = 1e-099
Identities = 179/269 (66%), Positives = 224/269 (83%)
Frame = +3
Query: 231 RCHVAKAMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVS 410
R A A+ +L +KG D++ A+EV++IL MA RA+ RR V HT+FLTPP+VKE++
Sbjct: 36 RYSTAIAVAAARDLAVKGSVDRNSAEEVRNILNMAERASQRRNVFHTNFLTPPIVKEAML 95
Query: 411 VLGKLADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLG 590
L K AD VAQGGYP+AERCRISVGHPD +T++PD+VAAL I+GNF ++CSHGDFLG
Sbjct: 96 ALEKFADTKAVAQGGYPQAERCRISVGHPDVMTSNPDVVAALSISGNFRLESCSHGDFLG 155
Query: 591 AILGTGITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY* 770
AILGTGITR+K+GDIL+Q E+GAQVL+ PELVD+++S L+KVG V +C++IPLLALEY
Sbjct: 156 AILGTGITREKVGDILLQGERGAQVLVDPELVDYLISTLEKVGKVGVSCTQIPLLALEYE 215
Query: 771 PPRTNTFKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVV 950
PPRTN+FKT+E+SLR+DA+ASAGFKISR+KL +IS GDVRVNW TKNG T+K+GDVV
Sbjct: 216 PPRTNSFKTVESSLRVDALASAGFKISRTKLASLISSGDVRVNWTPTTKNGVTLKSGDVV 275
Query: 951 SVSGKGRLKIGEINETKKGKFAVEIIRYL 1037
SVSG GRLKIGEI T+KGK+AVE+IRYL
Sbjct: 276 SVSGMGRLKIGEIVTTRKGKYAVELIRYL 304
>gi|297597609|ref|NP_001044235.2| Os01g0747700 [Oryza sativa Japonica Group]
Length = 305
Score = 365 bits (935), Expect = 1e-098
Identities = 182/308 (59%), Positives = 237/308 (76%), Gaps = 12/308 (3%)
Frame = +3
Query: 126 SSSSSYSSYLHTTY--KPLITNHTILPSSPLLHSALRRCHVAKAMKGDV--ELLLKGVGD 293
S +S + LH + + + T++ PS RCH A + + +K D
Sbjct: 6 SLASPFRRVLHVPFARRAIPTSYHFFPSG--------RCHAALSFAAAAAGDSAVKASLD 57
Query: 294 QSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVAQGGYPEAER 473
++ A+E++ IL+MA+RA+ RR+V HT+FLTPP+VKE + + KLAD+ VAQGGYP+AER
Sbjct: 58 RNAAEELRSILDMAQRASQRRDVFHTNFLTPPIVKECMLAIEKLADIKAVAQGGYPQAER 117
Query: 474 CRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGTGITRDKLGDILVQEEK 653
CR+SVGHPD +T++PD+VAAL I+GNF + CSHGDFLGAILGTGITRDK+GDIL+Q E+
Sbjct: 118 CRVSVGHPDCMTSNPDVVAALSISGNFRLEPCSHGDFLGAILGTGITRDKVGDILLQGER 177
Query: 654 GAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTNTFKTIEASLRIDAVAS 833
GAQVL+ PELVD++ S L+KVG V +C++IPLLALEY PPRT +FKT+E+SLR+DA+ S
Sbjct: 178 GAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEYEPPRTKSFKTVESSLRVDALGS 237
Query: 834 AGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGKGRLKIGEINETKKGKF 1013
AGFKISR+KL +IS GDVRVNW+ V+KNG T+K GDVVSVSG GRLKIGEI T+KGK+
Sbjct: 238 AGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDVVSVSGMGRLKIGEIVTTRKGKY 297
Query: 1014 AVEIIRYL 1037
AVE+IRYL
Sbjct: 298 AVELIRYL 305
>gi|242054411|ref|XP_002456351.1| hypothetical protein SORBIDRAFT_03g034470
[Sorghum bicolor]
Length = 304
Score = 365 bits (935), Expect = 1e-098
Identities = 177/269 (65%), Positives = 226/269 (84%)
Frame = +3
Query: 231 RCHVAKAMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVS 410
R A A+ + +KG D++ A+EV++IL+MA+RA+ RR+V HT+FLTPP+VKE++
Sbjct: 36 RYSTAIAVAAARDSAVKGSVDRNSAEEVRNILDMAQRASQRRDVFHTNFLTPPIVKEAML 95
Query: 411 VLGKLADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLG 590
+ KLAD+ VAQGGYP+AERCRISVGHPD +T++PD+VAAL I+GNF + CSHGDFLG
Sbjct: 96 AVEKLADIKAVAQGGYPQAERCRISVGHPDFMTSNPDVVAALSISGNFRLEPCSHGDFLG 155
Query: 591 AILGTGITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY* 770
AILGTGITR+K+GDIL+Q E+GAQVL+ P LVD+++S L+KVG V +C++IPLLALEY
Sbjct: 156 AILGTGITREKVGDILLQGERGAQVLVDPGLVDYLISTLEKVGKVGVSCTQIPLLALEYE 215
Query: 771 PPRTNTFKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVV 950
PPRTN+FKT+E+SLR+DA+ASAGFKISR+KL +IS GDVRVNW TKNG T+K+GDVV
Sbjct: 216 PPRTNSFKTVESSLRVDALASAGFKISRTKLASLISSGDVRVNWTPTTKNGVTLKSGDVV 275
Query: 951 SVSGKGRLKIGEINETKKGKFAVEIIRYL 1037
SVSG GRLKIGEI T+KGK+AVE+IRYL
Sbjct: 276 SVSGMGRLKIGEIVTTRKGKYAVELIRYL 304
>gi|218189042|gb|EEC71469.1| hypothetical protein OsI_03722 [Oryza sativa Indica
Group]
Length = 305
Score = 364 bits (933), Expect = 2e-098
Identities = 182/308 (59%), Positives = 237/308 (76%), Gaps = 12/308 (3%)
Frame = +3
Query: 126 SSSSSYSSYLHTTY--KPLITNHTILPSSPLLHSALRRCHVAKAMKGDV--ELLLKGVGD 293
S +S LH + + + T++ +PS RCH A + + +K D
Sbjct: 6 SLASPLRRVLHVPFARRAIPTSYHFIPSG--------RCHAALSFAAAAAGDSAVKASLD 57
Query: 294 QSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVAQGGYPEAER 473
++ A+E++ IL+MA+RA+ RR+V HT+FLTPP+VKE + + KLAD+ VAQGGYP+AER
Sbjct: 58 RNAAEELRSILDMAQRASQRRDVFHTNFLTPPIVKECMLAIEKLADIKAVAQGGYPQAER 117
Query: 474 CRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGTGITRDKLGDILVQEEK 653
CR+SVGHPD +T++PD+VAAL I+GNF + CSHGDFLGAILGTGITRDK+GDIL+Q E+
Sbjct: 118 CRVSVGHPDCMTSNPDVVAALSISGNFRLEPCSHGDFLGAILGTGITRDKVGDILLQGER 177
Query: 654 GAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTNTFKTIEASLRIDAVAS 833
GAQVL+ PELVD++ S L+KVG V +C++IPLLALEY PPRT +FKT+E+SLR+DA+ S
Sbjct: 178 GAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEYEPPRTKSFKTVESSLRVDALGS 237
Query: 834 AGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGKGRLKIGEINETKKGKF 1013
AGFKISR+KL +IS GDVRVNW+ V+KNG T+K GDVVSVSG GRLKIGEI T+KGK+
Sbjct: 238 AGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDVVSVSGMGRLKIGEIVTTRKGKY 297
Query: 1014 AVEIIRYL 1037
AVE+IRYL
Sbjct: 298 AVELIRYL 305
>gi|195639066|gb|ACG39001.1| RNA-binding S4 [Zea mays]
Length = 304
Score = 363 bits (931), Expect = 3e-098
Identities = 177/269 (65%), Positives = 223/269 (82%)
Frame = +3
Query: 231 RCHVAKAMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVS 410
R A A+ + +KG D++ A+EV++IL MA RA+ RR+V HT+FLTPP+VKE++
Sbjct: 36 RYSTAIAVAAARDSAVKGSVDRNSAEEVRNILNMAERASQRRDVFHTNFLTPPIVKETML 95
Query: 411 VLGKLADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLG 590
L K AD VAQGGYP+AERCRISVGHPD +T++PD+VAAL I+GNF ++CSHGDFLG
Sbjct: 96 ALEKFADTKAVAQGGYPQAERCRISVGHPDVMTSNPDVVAALSISGNFRLESCSHGDFLG 155
Query: 591 AILGTGITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY* 770
AILGTGITR+K+GDIL+Q E+GAQVL+ PELVD+++S L+KVG V +C++IPLLALEY
Sbjct: 156 AILGTGITREKVGDILLQGERGAQVLVDPELVDYLISTLEKVGKVGVSCTQIPLLALEYE 215
Query: 771 PPRTNTFKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVV 950
PPRTN+FKT+E+SLR+DA+ASAGFKISR+KL +IS GDVRVNW TKNG T+K+ DVV
Sbjct: 216 PPRTNSFKTVESSLRVDALASAGFKISRTKLASLISSGDVRVNWTPTTKNGVTLKSRDVV 275
Query: 951 SVSGKGRLKIGEINETKKGKFAVEIIRYL 1037
SVSG GRLKIGEI T+KGK+AVE+IRYL
Sbjct: 276 SVSGMGRLKIGEIVTTRKGKYAVELIRYL 304
>gi|326523405|dbj|BAJ88743.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 305
Score = 357 bits (915), Expect = 2e-096
Identities = 177/280 (63%), Positives = 223/280 (79%), Gaps = 2/280 (0%)
Frame = +3
Query: 204 SPLLHSALRRCHVAKAMKGDV--ELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDF 377
+PL A RC VA A+ + KG + V +EV IL+MA+RA+ RR+V HT F
Sbjct: 26 TPLHFFARGRCDVALAVSAAAVGDSSAKGSVHRHVTEEVMGILDMAQRASQRRDVFHTSF 85
Query: 378 LTPPVVKESVSVLGKLADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFG 557
LTPP++ E++ + KLAD+ +AQGGYP+AERCRISVGHPD++ NDPD+VAAL I+GNF
Sbjct: 86 LTPPIITEAMLAIEKLADIKAIAQGGYPQAERCRISVGHPDSMRNDPDVVAALSISGNFR 145
Query: 558 FQACSHGDFLGAILGTGITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATC 737
+ CSHGDFLGAILG GITRDK+GDIL+Q E+GAQVL+ PELVD++ S L+KVG V +C
Sbjct: 146 LEPCSHGDFLGAILGAGITRDKVGDILLQGERGAQVLVDPELVDYLTSTLEKVGKVGVSC 205
Query: 738 SKIPLLALEY*PPRTNTFKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTK 917
++IPLLA+EY PPRT +FKT+E+SLR+DAVASAGFKISR+KL MIS GDVRVNW+ V+K
Sbjct: 206 TQIPLLAIEYEPPRTKSFKTVESSLRVDAVASAGFKISRTKLGSMISSGDVRVNWSLVSK 265
Query: 918 NGTTVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIRYL 1037
+G T+K GDVVSVSG GRLKIGEI TKKGK+ V++I+YL
Sbjct: 266 SGATLKAGDVVSVSGMGRLKIGEIVTTKKGKYVVQLIQYL 305
>gi|222619243|gb|EEE55375.1| hypothetical protein OsJ_03443 [Oryza sativa
Japonica Group]
Length = 290
Score = 337 bits (863), Expect = 3e-090
Identities = 168/289 (58%), Positives = 220/289 (76%), Gaps = 12/289 (4%)
Frame = +3
Query: 126 SSSSSYSSYLHTTY--KPLITNHTILPSSPLLHSALRRCHVAKAMKGDV--ELLLKGVGD 293
S +S + LH + + + T++ PS RCH A + + +K D
Sbjct: 6 SLASPFRRVLHVPFARRAIPTSYHFFPSG--------RCHAALSFAAAAAGDSAVKASLD 57
Query: 294 QSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVAQGGYPEAER 473
++ A+E++ IL+MA+RA+ RR+V HT+FLTPP+VKE + + KLAD+ VAQGGYP+AER
Sbjct: 58 RNAAEELRSILDMAQRASQRRDVFHTNFLTPPIVKECMLAIEKLADIKAVAQGGYPQAER 117
Query: 474 CRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGTGITRDKLGDILVQEEK 653
CR+SVGHPD +T++PD+VAAL I+GNF + CSHGDFLGAILGTGITRDK+GDIL+Q E+
Sbjct: 118 CRVSVGHPDCMTSNPDVVAALSISGNFRLEPCSHGDFLGAILGTGITRDKVGDILLQGER 177
Query: 654 GAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTNTFKTIEASLRIDAVAS 833
GAQVL+ PELVD++ S L+KVG V +C++IPLLALEY PPRT +FKT+E+SLR+DA+ S
Sbjct: 178 GAQVLVDPELVDYLTSTLEKVGKVGVSCTQIPLLALEYEPPRTKSFKTVESSLRVDALGS 237
Query: 834 AGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGKGRLKI 980
AGFKISR+KL +IS GDVRVNW+ V+KNG T+K GDVVSVSG GRLKI
Sbjct: 238 AGFKISRTKLASLISAGDVRVNWSPVSKNGVTLKAGDVVSVSGMGRLKI 286
>gi|116784861|gb|ABK23497.1| unknown [Picea sitchensis]
Length = 332
Score = 335 bits (858), Expect = 1e-089
Identities = 160/263 (60%), Positives = 213/263 (80%)
Frame = +3
Query: 249 AMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLA 428
A+K + E LKG+ S VK IL A++A S RE+ H+DFL PPVV++++S + KL+
Sbjct: 70 ALKYEKEDHLKGLSKGSAESPVKLILVQAQKAASGREIFHSDFLMPPVVEDALSAIKKLS 129
Query: 429 DVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGTG 608
DV + QGGYP+AERCR+S+GH D +++ PD V+AL I+GNF F SHGDFLGA+L TG
Sbjct: 130 DVEALVQGGYPQAERCRLSIGHTDVISSAPDAVSALSISGNFTFDPASHGDFLGAVLATG 189
Query: 609 ITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTNT 788
I R+K+GDIL+Q EKGAQ+++VPELVD+IVS+L +V NV +CS IPLLALE+ PPRT
Sbjct: 190 IRREKVGDILLQGEKGAQIIVVPELVDYIVSSLTQVHNVPVSCSPIPLLALEFQPPRTKV 249
Query: 789 FKTIEASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGKG 968
K++EASLR+DA+ASAGF++SRSKLV++IS GDVRVNW+ VTKNGT +KTGD++S+ GKG
Sbjct: 250 LKSVEASLRVDAIASAGFQMSRSKLVNLISGGDVRVNWSEVTKNGTLLKTGDIISIKGKG 309
Query: 969 RLKIGEINETKKGKFAVEIIRYL 1037
R+++GEI T+KGKFAV++IRYL
Sbjct: 310 RVQLGEIKTTRKGKFAVDLIRYL 332
>gi|255586534|ref|XP_002533905.1| RNA binding protein, putative [Ricinus
communis]
Length = 231
Score = 335 bits (857), Expect = 1e-089
Identities = 163/218 (74%), Positives = 194/218 (88%)
Frame = +3
Query: 222 ALRRCHVAKAMKGDVELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKE 401
AL C +A+AMK +V LLK VGD+SV +EVKHIL+MARRA+SRRE LHTDFLTPP++KE
Sbjct: 13 ALGICQLAQAMKSEVSDLLKSVGDKSVVEEVKHILDMARRASSRREALHTDFLTPPILKE 72
Query: 402 SVSVLGKLADVAVVAQGGYPEAERCRISVGHPDALTNDPDIVAALGITGNFGFQACSHGD 581
S+ +L KLAD+ V QGGYP+AERCR+SVGHP+AL NDPDI+AAL ITGNF FQ CSHGD
Sbjct: 73 SMLLLEKLADIKAVGQGGYPQAERCRLSVGHPEALMNDPDIIAALSITGNFAFQPCSHGD 132
Query: 582 FLGAILGTGITRDKLGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLAL 761
FLG+ILGTGI+R+K+GDI++Q EKGAQ+L VPELVDFI+S+LDKVGNVS +C++IPLLAL
Sbjct: 133 FLGSILGTGISREKVGDIILQGEKGAQILTVPELVDFIMSSLDKVGNVSVSCARIPLLAL 192
Query: 762 EY*PPRTNTFKTIEASLRIDAVASAGFKISRSKLVDMI 875
EY PPRT TF TIEASLR+DA+ASAGFKISRSKLVD+I
Sbjct: 193 EYEPPRTRTFNTIEASLRVDALASAGFKISRSKLVDLI 230
>gi|297847696|ref|XP_002891729.1| hypothetical protein ARALYDRAFT_314636
[Arabidopsis lyrata subsp. lyrata]
Length = 759
Score = 276 bits (704), Expect = 7e-072
Identities = 135/171 (78%), Positives = 153/171 (89%)
Frame = +3
Query: 132 SSSYSSYLHTTYKPLITNHTILPSSPLLHSALRRCHVAKAMKGDVELLLKGVGDQSVAKE 311
S + SSYLH+ +K LI+N +I S PL HSALRRC++A+A+KGDV+ LLKGVGDQ+VAKE
Sbjct: 457 SVAASSYLHSNHKTLISNLSIPASFPLRHSALRRCYIAEAIKGDVDFLLKGVGDQAVAKE 516
Query: 312 VKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVAQGGYPEAERCRISVG 491
VK ILEMARRA S+REVLHTDFLTPP+VKESV VLGK ADV +VAQGGYPEAERCRIS+G
Sbjct: 517 VKQILEMARRAASKREVLHTDFLTPPIVKESVLVLGKFADVKIVAQGGYPEAERCRISIG 576
Query: 492 HPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGTGITRDKLGDILVQ 644
HPD LTNDPDIVAAL ITGNFGFQ CSHGDFLGAILGTGI+R+KLGDIL+Q
Sbjct: 577 HPDVLTNDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISREKLGDILIQ 627
>gi|9454543|gb|AAF87866.1|AC022520_10 Unknown protein [Arabidopsis thaliana]
Length = 773
Score = 266 bits (678), Expect = 8e-069
Identities = 133/171 (77%), Positives = 150/171 (87%)
Frame = +3
Query: 132 SSSYSSYLHTTYKPLITNHTILPSSPLLHSALRRCHVAKAMKGDVELLLKGVGDQSVAKE 311
S + SS LHT K LITN +I S PL SALRRC+ A+A+KGDV+ LLKGVGDQ+VAKE
Sbjct: 471 SVAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEAIKGDVDFLLKGVGDQAVAKE 530
Query: 312 VKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVAQGGYPEAERCRISVG 491
VK ILEMARRA+S+REVLHTDFLTPP+VKESVS+L K ADV +VAQGGYPEAERCRIS+G
Sbjct: 531 VKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIVAQGGYPEAERCRISIG 590
Query: 492 HPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGTGITRDKLGDILVQ 644
HPD LT+DPDIVAAL ITGNFGFQ CSHGDFLGAILGTGI+R+KLGDIL+Q
Sbjct: 591 HPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISREKLGDILIQ 641
>gi|67923764|ref|ZP_00517228.1| RNA-binding S4 [Crocosphaera watsonii WH 8501]
Length = 275
Score = 236 bits (602), Expect = 5e-060
Identities = 120/257 (46%), Positives = 176/257 (68%), Gaps = 4/257 (1%)
Frame = +3
Query: 267 ELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVA 446
E LLKGV +++ E+ I++ A A EV+ +DF +PPV+ E + +L D+ +V
Sbjct: 21 ETLLKGVENRT---EITRIVDQAEIAVKTWEVVVSDFFSPPVIAEVENGFSRLTDIEIVV 77
Query: 447 QGGYPEAERCRISVGHPDALTNDPDI-VAALGITGNFGFQACSHGDFLGAILGTGITRDK 623
GGYP+AER RI + P+ P I +AAL I GNF F SH DFLGAIL TGI R+K
Sbjct: 78 WGGYPQAERRRIGIARPEIPLEQPQIPLAALDIAGNFLFDPASHRDFLGAILATGIVREK 137
Query: 624 LGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTNTFKTIE 803
+GDI+V E+G QV++VPELV+F+ ++L +V +V +I L L+ PP+T T+E
Sbjct: 138 IGDIIVLGERGGQVIVVPELVEFLETSLTQVRSVPVKTQQIELSELKIRPPKTKEMTTVE 197
Query: 804 ASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGKGRLKIG 983
AS+R+DA+ASAGF +SRSK+ D I+RGDVRVNW +++ VK+GD+++V GKGRL++G
Sbjct: 198 ASMRLDAIASAGFGMSRSKMSDAINRGDVRVNWKETSQSSYNVKSGDLITVRGKGRLEVG 257
Query: 984 EINETKKGKFAVEIIRY 1034
E+ TKK ++ +++ R+
Sbjct: 258 EVAITKKQRYRIQLTRF 274
>gi|126654802|ref|ZP_01726336.1| RNA-binding S4 [Cyanothece sp. CCY0110]
Length = 259
Score = 233 bits (594), Expect = 4e-059
Identities = 119/257 (46%), Positives = 174/257 (67%), Gaps = 4/257 (1%)
Frame = +3
Query: 267 ELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVA 446
E LLKG+ ++ +E+ I++ A A EV+ +DF +PPVV E + +L +V ++
Sbjct: 5 ETLLKGIENR---EEMTRIIDQAEMAIKTWEVVVSDFFSPPVVAEVENAFSQLTEVEIMV 61
Query: 447 QGGYPEAERCRISVGHPDALTNDPDI-VAALGITGNFGFQACSHGDFLGAILGTGITRDK 623
GGYP+AER RI + P+ I +AAL I GNF F SH DFLGAIL TGI RDK
Sbjct: 62 WGGYPQAERRRIGITRPEIPLEQSQIPLAALDIAGNFLFDPASHRDFLGAILATGIVRDK 121
Query: 624 LGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTNTFKTIE 803
+GDI+V E+G QV+IVPELV+F+ ++L +V +V I L L+ PP+T T+E
Sbjct: 122 IGDIIVLGERGGQVIIVPELVEFLETSLTQVRSVPVKTQSIELSELKIRPPKTKEMTTVE 181
Query: 804 ASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGKGRLKIG 983
AS+R+DA+ASAGF +SRSK+VD I++GDVRVNW +T+ +++GD+++V GKGRL++G
Sbjct: 182 ASMRLDAIASAGFGMSRSKMVDAINKGDVRVNWKEITQASHNIESGDLIAVRGKGRLEVG 241
Query: 984 EINETKKGKFAVEIIRY 1034
E+ TKK ++ + + R+
Sbjct: 242 EVGITKKQRYRIHLTRF 258
>gi|159028854|emb|CAO90659.1| unnamed protein product [Microcystis aeruginosa
PCC 7806]
Length = 259
Score = 231 bits (589), Expect = 2e-058
Identities = 122/258 (47%), Positives = 173/258 (67%), Gaps = 4/258 (1%)
Frame = +3
Query: 267 ELLLKGVGDQSVAKEVKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVA 446
E LLKGV ++ +E+ +++ A +A EV TDFL+P V+ E +L DV++
Sbjct: 5 EELLKGVENR---EEIAKVIDKAEQAIKTWEVTTTDFLSPAVLAEVERFFQRLTDVSMEK 61
Query: 447 QGGYPEAERCRISVGHPDALTNDPDI-VAALGITGNFGFQACSHGDFLGAILGTGITRDK 623
GGYP+AER R+ + D DI ++AL I GNF F +H DFLGA+LGTGI R+K
Sbjct: 62 WGGYPQAERQRLGIARVDLPLTVTDIPLSALDIAGNFLFDTANHRDFLGAMLGTGIVREK 121
Query: 624 LGDILVQEEKGAQVLIVPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTNTFKTIE 803
+GDI+V E+GAQ ++VPEL DF+ + L +V +V S IPL AL+ PP+ T+E
Sbjct: 122 VGDIIVLGERGAQAIVVPELADFLSANLRQVRSVPVKTSLIPLTALKVRPPQKKEINTVE 181
Query: 804 ASLRIDAVASAGFKISRSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGKGRLKIG 983
ASLR+DA+ASAGF ISRSK+ + IS GDVRVNW ++++ VKTGD++S GKGRL++G
Sbjct: 182 ASLRLDAIASAGFGISRSKMAEAISSGDVRVNWKDISQSSYNVKTGDLISFRGKGRLEVG 241
Query: 984 EINETKKGKFAVEIIRYL 1037
E+ TKK ++ V + R++
Sbjct: 242 EVTVTKKERYRVHLTRFI 259
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 475,288,458,330
Number of Sequences: 15229318
Number of Extensions: 475288458330
Number of Successful Extensions: 120006622
Number of sequences better than 0.0: 0
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