BLASTX 7.6.2
Query= UN03633 /QuerySize=1180
(1179 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G53120.1 | Symbols: | RNA-binding S4 domain-c... 494 5e-140
>TAIR9_protein||AT1G53120.1 | Symbols: | RNA-binding S4 domain-containing
protein | chr1:19792798-19794605 FORWARD
Length = 321
Score = 494 bits (1271), Expect = 5e-140
Identities = 252/303 (83%), Positives = 275/303 (90%)
Frame = +3
Query: 132 SSSYSSYLHTTYKPLITNHTILPSSPLLHSALRRCHVAKAMKGDVELLLKGVGDQSVAKE 311
S + SS LHT K LITN +I S PL SALRRC+ A+A+KGDV+ LLKGVGDQ+VAKE
Sbjct: 19 SVAASSCLHTNQKTLITNLSIPTSFPLRQSALRRCYSAEAIKGDVDFLLKGVGDQAVAKE 78
Query: 312 VKHILEMARRATSRREVLHTDFLTPPVVKESVSVLGKLADVAVVAQGGYPEAERCRISVG 491
VK ILEMARRA+S+REVLHTDFLTPP+VKESVS+L K ADV +VAQGGYPEAERCRIS+G
Sbjct: 79 VKQILEMARRASSKREVLHTDFLTPPIVKESVSLLEKFADVKIVAQGGYPEAERCRISIG 138
Query: 492 HPDALTNDPDIVAALGITGNFGFQACSHGDFLGAILGTGITRDKLGDILVQEEKGAQVLI 671
HPD LT+DPDIVAAL ITGNFGFQ CSHGDFLGAILGTGI+R+KLGDIL+QEEKGAQVLI
Sbjct: 139 HPDVLTSDPDIVAALSITGNFGFQPCSHGDFLGAILGTGISREKLGDILIQEEKGAQVLI 198
Query: 672 VPELVDFIVSALDKVGNVSATCSKIPLLALEY*PPRTNTFKTIEASLRIDAVASAGFKIS 851
VPELVDF+V+ALDKVGNV TCSKIPLLALEY PPRTN+FKT+EASLRIDAVASAGFKIS
Sbjct: 199 VPELVDFVVTALDKVGNVGVTCSKIPLLALEYEPPRTNSFKTVEASLRIDAVASAGFKIS 258
Query: 852 RSKLVDMISRGDVRVNWASVTKNGTTVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIR 1031
RSKLVD+IS DVRVNWA+VTKNGT VKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIR
Sbjct: 259 RSKLVDLISSKDVRVNWATVTKNGTIVKTGDVVSVSGKGRLKIGEINETKKGKFAVEIIR 318
Query: 1032 YL* 1040
YL*
Sbjct: 319 YL* 321
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,522,334,421
Number of Sequences: 33410
Number of Extensions: 2522334421
Number of Successful Extensions: 95234790
Number of sequences better than 0.0: 0
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