BLASTX 7.6.2
Query= UN03703 /QuerySize=924
(923 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G24972.1 | Symbols: TPD1 | TPD1 (TAPETUM DETER... 278 5e-075
TAIR9_protein||AT1G32583.1 | Symbols: | FUNCTIONS IN: molecular... 150 2e-036
>TAIR9_protein||AT4G24972.1 | Symbols: TPD1 | TPD1 (TAPETUM DETERMINANT 1) |
chr4:12838220-12839619 FORWARD
Length = 177
Score = 278 bits (709), Expect = 5e-075
Identities = 139/178 (78%), Positives = 155/178 (87%), Gaps = 6/178 (3%)
Frame = -1
Query: 722 MSRRRLLLSATLLSYLLHGMALVSVVASGVEEVSRDNVDLTKTTTLTTSHTHRKMLHLS- 546
M+RRRLL+SATLLSYLL+GMALVSV ASG E++ RDN+DLTKTTT + S +HRKML LS
Sbjct: 1 MNRRRLLVSATLLSYLLYGMALVSVEASGGEKL-RDNLDLTKTTTSSPSISHRKMLLLSP 59
Query: 545 ----HETRVEPDRIGEKCKKSDIVVNQAATEPMPNGIPGYTVEITNQCMSGYNISRIHVS 378
E VEP+RIGEKCK +DIVVNQA TEPMPNGIPGY VEITNQCMSG ISRIH++
Sbjct: 60 GTGKTERSVEPERIGEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIISRIHIN 119
Query: 377 CGWFSSVKLVNPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYRLAVSFVTCS* 204
CGWFSS KL+NPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPY L+V+FVTC+*
Sbjct: 120 CGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVTCA* 177
>TAIR9_protein||AT1G32583.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; BEST Arabidopsis thaliana protein match is: TPD1
(TAPETUM DETERMINANT 1) (TAIR:AT4G24972.1); Has 78 Blast hits to 76
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:11787351-11788103 FORWARD
Length = 180
Score = 150 bits (377), Expect = 2e-036
Identities = 71/119 (59%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Frame = -1
Query: 566 RKMLHLSHETRVEPDRIGEKCKKSDIVVNQAATEPMPNGIPGYTVEITNQCMSGYNISRI 387
RK+L LS + +RIG+ C K DIV+ Q +T P+P+G+P YTVEI N C+S NI+ I
Sbjct: 61 RKLL-LSPDIGDGTNRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEI 119
Query: 386 HVSCGWFSSVKLVNPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYRLAVSFVTC 210
HVSCGWFSSV+LVNPRVF+R+ YDDCLVN+G+PL G +LSF YAN+F Y L+V+ V+C
Sbjct: 120 HVSCGWFSSVRLVNPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,611,954,925
Number of Sequences: 33410
Number of Extensions: 2611954925
Number of Successful Extensions: 100565490
Number of sequences better than 0.0: 0
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