BLASTX 7.6.2
Query= UN03735 /QuerySize=821
(820 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G59040.2 | Symbols: | pentatricopeptide (PPR)... 363 1e-100
TAIR9_protein||AT3G59040.1 | Symbols: | pentatricopeptide (PPR)... 363 1e-100
TAIR9_protein||AT2G37230.1 | Symbols: | pentatricopeptide (PPR)... 92 5e-019
TAIR9_protein||AT1G03560.1 | Symbols: | pentatricopeptide (PPR)... 91 8e-019
TAIR9_protein||AT5G04810.1 | Symbols: | pentatricopeptide (PPR)... 90 2e-018
TAIR9_protein||AT1G62910.1 | Symbols: | pentatricopeptide (PPR)... 88 7e-018
TAIR9_protein||AT1G63070.1 | Symbols: | pentatricopeptide (PPR)... 86 2e-017
TAIR9_protein||AT5G61400.1 | Symbols: | pentatricopeptide (PPR)... 86 2e-017
TAIR9_protein||AT5G42310.1 | Symbols: | pentatricopeptide (PPR)... 86 2e-017
TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)... 85 4e-017
TAIR9_protein||AT1G62680.1 | Symbols: | LOCATED IN: chloroplast... 84 7e-017
TAIR9_protein||AT1G71060.1 | Symbols: | pentatricopeptide (PPR)... 84 7e-017
TAIR9_protein||AT1G51965.1 | Symbols: | pentatricopeptide (PPR)... 84 9e-017
TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological... 82 3e-016
TAIR9_protein||AT1G18900.1 | Symbols: | pentatricopeptide (PPR)... 82 5e-016
TAIR9_protein||AT1G18900.2 | Symbols: | pentatricopeptide (PPR)... 82 5e-016
TAIR9_protein||AT1G12700.1 | Symbols: | helicase domain-contain... 81 6e-016
TAIR9_protein||AT4G11690.1 | Symbols: | pentatricopeptide (PPR)... 81 8e-016
TAIR9_protein||AT1G06710.1 | Symbols: | pentatricopeptide (PPR)... 80 1e-015
>TAIR9_protein||AT3G59040.2 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:21821495-21823919 REVERSE
Length = 591
Score = 363 bits (930), Expect = 1e-100
Identities = 182/222 (81%), Positives = 200/222 (90%), Gaps = 3/222 (1%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR +PDL SYTTMLS+YVN
Sbjct: 344 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVN 403
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
ASDMEGAEKFFKRIKVDGFEPNIVTYGT+IKGYAKAND++K+MEVYEKMRLSGIKANQTI
Sbjct: 404 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI 463
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEAKEVTGLVD 279
LTTIMDASGRCK+FGSAL WYKEME CGVPPDQKAKNVLLSLASTQDELEEAKE+TG+ +
Sbjct: 464 LTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRN 523
Query: 278 EKTASLAGVYRTDDDDDEDNYITSSDEDEDEDEDEGDYEEED 153
E +A VY +DDD++ I+S D DEDEGD +++D
Sbjct: 524 ETATIIARVYGSDDDEEGVEDISSESSD---DEDEGDDDDDD 562
>TAIR9_protein||AT3G59040.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:21821495-21824233 REVERSE
Length = 584
Score = 363 bits (930), Expect = 1e-100
Identities = 182/222 (81%), Positives = 200/222 (90%), Gaps = 3/222 (1%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR +PDL SYTTMLS+YVN
Sbjct: 337 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVN 396
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
ASDMEGAEKFFKRIKVDGFEPNIVTYGT+IKGYAKAND++K+MEVYEKMRLSGIKANQTI
Sbjct: 397 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTI 456
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEAKEVTGLVD 279
LTTIMDASGRCK+FGSAL WYKEME CGVPPDQKAKNVLLSLASTQDELEEAKE+TG+ +
Sbjct: 457 LTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELEEAKELTGIRN 516
Query: 278 EKTASLAGVYRTDDDDDEDNYITSSDEDEDEDEDEGDYEEED 153
E +A VY +DDD++ I+S D DEDEGD +++D
Sbjct: 517 ETATIIARVYGSDDDEEGVEDISSESSD---DEDEGDDDDDD 555
>TAIR9_protein||AT2G37230.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:15637177-15639450 REVERSE
Length = 758
Score = 92 bits (226), Expect = 5e-019
Identities = 53/176 (30%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
F +M+ GV PT YN++L F +S +E A F+ M+ PD ++ TM++ +
Sbjct: 243 FNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR 302
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
M+ AEK F +K + P++V+Y TMIKGY + +D + ++E+MR SGI+ N T
Sbjct: 303 FKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATT 362
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEAKEVT 291
+T++ A + K M + P K ++ L L +Q + + T
Sbjct: 363 YSTLLPGLCDAGKMVEAKNILKNMMAKHIAP--KDNSIFLKLLVSQSKAGDMAAAT 416
>TAIR9_protein||AT1G03560.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:890428-892410 REVERSE
Length = 661
Score = 91 bits (224), Expect = 8e-019
Identities = 52/164 (31%), Positives = 88/164 (53%)
Frame = -3
Query: 785 THKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVNASDMEGAEKFF 606
T A N L+ +F GMVE+ V++ M+ + P L +Y +++ V+A ++ AE+ F
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 605 KRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTILTTIMDASGRC 426
+ ++ +P+IVTY TMIKGY KA K ME M G +A++ T++ A
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYAD 305
Query: 425 KDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEAKEV 294
DFGS ++ Y+EM+ G+ A ++++ + +L E V
Sbjct: 306 SDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTV 349
>TAIR9_protein||AT5G04810.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:1390049-1393760 FORWARD
Length = 953
Score = 90 bits (221), Expect = 2e-018
Identities = 63/240 (26%), Positives = 117/240 (48%), Gaps = 22/240 (9%)
Frame = -3
Query: 815 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVNA 636
+EM + YNIL+D +A G V +A + + M+++ PD+ +YT+ +S+ A
Sbjct: 718 KEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKA 777
Query: 635 SDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI- 459
DM A + + ++ G +PNI TY T+IKG+A+A+ +K + YE+M+ GIK ++ +
Sbjct: 778 GDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVY 837
Query: 458 ---LTTIMDASGRCKD--FGSALSWYKEMEGCGVPPDQKA----KNVLLSLASTQDELEE 306
LT+++ + + + ++ KEM G+ D L + ++ EL E
Sbjct: 838 HCLLTSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTE 897
Query: 305 AKEVTGLVDEKTASLAGVYRTDDDDDEDNYITS-SDEDEDEDEDEGDYEEEDDDIDGAKE 129
+ T D ++ SD D DED+ +G+ E+D+D++ +
Sbjct: 898 TLQKTFPPD-----------WSSHHHHHGFLDQVSDVDSDEDDVDGEDGEDDEDVNSVSD 946
>TAIR9_protein||AT1G62910.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23299060-23303162 FORWARD
Length = 1134
Score = 88 bits (216), Expect = 7e-018
Identities = 45/152 (29%), Positives = 74/152 (48%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
F++M+ GV P YNILLD +G + +A VF+ ++R PD+ +Y M+
Sbjct: 456 FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCK 515
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
A +E + F + + G PN++ Y TMI G+ + ++ + +KM+ G N
Sbjct: 516 AGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGT 575
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPD 363
T++ A R D ++ KEM CG D
Sbjct: 576 YNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
>TAIR9_protein||AT1G63070.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23385324-23387167 REVERSE
Length = 591
Score = 86 bits (212), Expect = 2e-017
Identities = 48/152 (31%), Positives = 77/152 (50%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
F++M+ GV P YNILLD +G VE A VF+ M++ D+ +YTTM+ +
Sbjct: 414 FKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK 473
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
A +E F + + G +PN+VTY TM+ G+ + ++ ++ +M+ G N
Sbjct: 474 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGT 533
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPD 363
T++ A R D ++ KEM CG D
Sbjct: 534 YNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
>TAIR9_protein||AT5G61400.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:24681550-24683514 FORWARD
Length = 655
Score = 86 bits (212), Expect = 2e-017
Identities = 43/150 (28%), Positives = 73/150 (48%)
Frame = -3
Query: 812 EMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVNAS 633
EM + P Y IL++ I V +A +F+ M+ +R +P +Y +++ Y
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEY 423
Query: 632 DMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTILT 453
+ME A + G EPNI+T+ T+I GY D+ M +Y +M + GI + T
Sbjct: 424 NMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYT 483
Query: 452 TIMDASGRCKDFGSALSWYKEMEGCGVPPD 363
++DA + + AL Y +M G+ P+
Sbjct: 484 ALIDAHFKEANMKEALRLYSDMLEAGIHPN 513
>TAIR9_protein||AT5G42310.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:16915860-16918238 FORWARD
Length = 710
Score = 86 bits (211), Expect = 2e-017
Identities = 40/160 (25%), Positives = 82/160 (51%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
FEE+ +G++P +AYN LL + +G ++ A+++ M + PD +Y+ ++ +YVN
Sbjct: 327 FEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVN 386
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
A E A K ++ +PN + ++ G+ + K +V ++M+ G+K ++
Sbjct: 387 AGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF 446
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLL 339
++D G+ A++ + M G+ PD+ N L+
Sbjct: 447 YNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLI 486
>TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:654102-656561 FORWARD
Length = 820
Score = 85 bits (209), Expect = 4e-017
Identities = 50/181 (27%), Positives = 90/181 (49%), Gaps = 3/181 (1%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
FEEM AG YN LLD + S ++A V M + F P + +Y +++S+Y
Sbjct: 302 FEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR 361
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
++ A + ++ G +P++ TY T++ G+ +A ++ M ++E+MR +G K N
Sbjct: 362 DGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICT 421
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEAKEVTGLVD 279
+ G F + + E+ CG+ PD N LL++ Q+ ++ EV+G+
Sbjct: 422 FNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG-QNGMD--SEVSGVFK 478
Query: 278 E 276
E
Sbjct: 479 E 479
Score = 82 bits (201), Expect = 4e-016
Identities = 47/174 (27%), Positives = 82/174 (47%)
Frame = -3
Query: 815 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVNA 636
E+M G+ P YN L+ + ++A VF+ M+ F D +Y +L Y +
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327
Query: 635 SDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTIL 456
+ A K + ++GF P+IVTY ++I YA+ LD+ ME+ +M G K +
Sbjct: 328 HRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTY 387
Query: 455 TTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEAKEV 294
TT++ R SA+S ++EM G P+ N + + + + E ++
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKI 441
>TAIR9_protein||AT1G62680.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
shoot apex, leaf whorl, flower, seed; EXPRESSED DURING: F mature embryo
stage, petal differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide (PPR)
repeat-containing protein (TAIR:AT1G63130.1); Has 26421 Blast hits to
6237 proteins in 192 species: Archae - 5; Bacteria - 22; Metazoa - 845;
Fungi - 755; Plants - 23373; Viruses - 0; Other Eukaryotes - 1421
(source: NCBI BLink). | chr1:23208247-23209893 REVERSE
Length = 549
Score = 84 bits (207), Expect = 7e-017
Identities = 46/170 (27%), Positives = 88/170 (51%)
Frame = -3
Query: 812 EMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVNAS 633
+M+ + P Y+ LLDAF +G V +AK +F+ M R PD+ +Y+++++
Sbjct: 250 DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHD 309
Query: 632 DMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTILT 453
++ A + F + G ++V+Y T+I G+ KA ++ M+++ +M G+ +N
Sbjct: 310 RIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYN 369
Query: 452 TIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEA 303
T++ + D A ++ +M+ G+ PD N+LL ELE+A
Sbjct: 370 TLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKA 419
>TAIR9_protein||AT1G71060.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:26805651-26807183 REVERSE
Length = 511
Score = 84 bits (207), Expect = 7e-017
Identities = 44/172 (25%), Positives = 85/172 (49%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
F +M + G + +N +LD + S V A+ VF M++ RF PD+ SYT +L +
Sbjct: 185 FHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQ 244
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
++ ++ + +K +GFEP++V YG +I + KA ++ + + +M K + I
Sbjct: 245 ELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHI 304
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEA 303
++++ G K AL +++ + G P + N L+ +E+A
Sbjct: 305 FCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDA 356
>TAIR9_protein||AT1G51965.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:19312078-19314145 REVERSE
Length = 651
Score = 84 bits (206), Expect = 9e-017
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 3/182 (1%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
FE+M G P YNIL+ +F G V++A +F+ + R PD+ SY ++++
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
D++ A FK ++ G P++VTY T+++ + K ++ ++E+M + G + N
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLAST---QDELEEAKEVTG 288
++D + A+ Y +M+ G+ PD VL L S + + +TG
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKSRIRRKNPITG 644
Query: 287 LV 282
V
Sbjct: 645 WV 646
>TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G63130.1);
Has 29147 Blast hits to 6292 proteins in 192 species: Archae - 8;
Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants - 25291; Viruses -
0; Other Eukaryotes - 1710 (source: NCBI BLink). |
chr1:23306534-23308423 FORWARD
Length = 630
Score = 82 bits (202), Expect = 3e-016
Identities = 43/162 (26%), Positives = 81/162 (50%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
F++M+ GV P Y+ILLD G +E+A VF+ +++ + PD+ +Y M+
Sbjct: 453 FKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCK 512
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
A +E F + + G +PN++ Y TMI G+ + ++ ++ +M+ G N
Sbjct: 513 AGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGT 572
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSL 333
T++ A R D ++ KEM CG D ++++++
Sbjct: 573 YNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
>TAIR9_protein||AT1G18900.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:6529778-6532360 FORWARD
Length = 861
Score = 82 bits (200), Expect = 5e-016
Identities = 44/181 (24%), Positives = 88/181 (48%)
Frame = -3
Query: 815 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVNA 636
+EM+ G +P YN L+ ++ + + +A VF M+ PD +Y T++ + A
Sbjct: 388 DEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 635 SDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTIL 456
++ A ++R++ G P+ TY +I KA L +++ +M G N
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 455 TTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEAKEVTGLVDE 276
+MD + +++ +AL Y++M+ G PD+ ++++ + LEEA+ V + +
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 275 K 273
K
Sbjct: 568 K 568
>TAIR9_protein||AT1G18900.2 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:6529778-6532360 FORWARD
Length = 861
Score = 82 bits (200), Expect = 5e-016
Identities = 44/181 (24%), Positives = 88/181 (48%)
Frame = -3
Query: 815 EEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVNA 636
+EM+ G +P YN L+ ++ + + +A VF M+ PD +Y T++ + A
Sbjct: 388 DEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 635 SDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTIL 456
++ A ++R++ G P+ TY +I KA L +++ +M G N
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTY 507
Query: 455 TTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEAKEVTGLVDE 276
+MD + +++ +AL Y++M+ G PD+ ++++ + LEEA+ V + +
Sbjct: 508 NIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQ 567
Query: 275 K 273
K
Sbjct: 568 K 568
>TAIR9_protein||AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 829
Score = 81 bits (199), Expect = 6e-016
Identities = 44/162 (27%), Positives = 76/162 (46%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
F+EM+ GV P Y ILLD +G +E+A +F+ +++ + + YTT++
Sbjct: 416 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 475
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
+E A F + G +PN++TY MI G K L + + KM G N
Sbjct: 476 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 535
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSL 333
T++ A R D ++ +EM+ CG D + +++ +
Sbjct: 536 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDM 577
>TAIR9_protein||AT4G11690.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:7056254-7057954 FORWARD
Length = 567
Score = 81 bits (198), Expect = 8e-016
Identities = 44/181 (24%), Positives = 82/181 (45%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
+E+M + GV P YN +++ G + A VF MR ++ +Y T++
Sbjct: 256 YEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKMRLSGIKANQTI 459
+ A K ++K DG PN++TY T+I G+ L K + + ++ G+ +
Sbjct: 316 EMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 458 LTTIMDASGRCKDFGSALSWYKEMEGCGVPPDQKAKNVLLSLASTQDELEEAKEVTGLVD 279
++ R D A KEME G+ P + +L+ + D +E+A ++ ++
Sbjct: 376 YNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSME 435
Query: 278 E 276
E
Sbjct: 436 E 436
>TAIR9_protein||AT1G06710.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:2057279-2060119 REVERSE
Length = 947
Score = 80 bits (196), Expect = 1e-015
Identities = 37/109 (33%), Positives = 65/109 (59%)
Frame = -3
Query: 818 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRFYPDLCSYTTMLSSYVN 639
FEEM G+ Y I++D+F +G++EQA+ F MR P++ +YT ++ +Y+
Sbjct: 465 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 524
Query: 638 ASDMEGAEKFFKRIKVDGFEPNIVTYGTMIKGYAKANDLDKVMEVYEKM 492
A + A + F+ + +G PNIVTY +I G+ KA ++K +++E+M
Sbjct: 525 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,611,954,925
Number of Sequences: 33410
Number of Extensions: 2611954925
Number of Successful Extensions: 100565490
Number of sequences better than 0.0: 0
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