BLASTX 7.6.2
Query= UN03758 /QuerySize=1734
(1733 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G02150.1 | Symbols: | pentatricopeptide (PPR)... 879 9e-256
TAIR9_protein||AT4G02820.1 | Symbols: | pentatricopeptide (PPR)... 266 5e-071
TAIR9_protein||AT1G60770.1 | Symbols: | pentatricopeptide (PPR)... 259 6e-069
TAIR9_protein||AT2G20710.1 | Symbols: | pentatricopeptide (PPR)... 249 4e-066
TAIR9_protein||AT4G21705.1 | Symbols: | pentatricopeptide (PPR)... 246 5e-065
TAIR9_protein||AT5G27460.1 | Symbols: | pentatricopeptide (PPR)... 245 1e-064
TAIR9_protein||AT1G02370.1 | Symbols: | pentatricopeptide (PPR)... 243 2e-064
TAIR9_protein||AT4G01990.1 | Symbols: | pentatricopeptide (PPR)... 229 5e-060
TAIR9_protein||AT2G20710.2 | Symbols: | pentatricopeptide (PPR)... 218 8e-057
TAIR9_protein||AT1G28020.1 | Symbols: | pentatricopeptide (PPR)... 194 2e-049
TAIR9_protein||AT5G09450.1 | Symbols: | pentatricopeptide (PPR)... 179 6e-045
TAIR9_protein||AT1G15480.1 | Symbols: | DNA binding | chr1:5318... 144 2e-034
TAIR9_protein||AT3G15590.1 | Symbols: | DNA-binding protein, pu... 114 2e-025
TAIR9_protein||AT1G13040.1 | Symbols: | pentatricopeptide (PPR)... 65 1e-010
TAIR9_protein||AT3G09060.1 | Symbols: | pentatricopeptide (PPR)... 64 3e-010
>TAIR9_protein||AT1G02150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:408779-410433 FORWARD
Length = 525
Score = 879 bits (2271), Expect = 9e-256
Identities = 453/529 (85%), Positives = 478/529 (90%), Gaps = 17/529 (3%)
Frame = +1
Query: 25 MLLQ-AVQNRNVPLASSSASYSRLPRSKLPPVVVSVAPMKKKTAAIIVCSISQVYGYGTV 201
MLLQ AVQNRNVPLA SSASYSRL R + P VVSVA + KKTAA IVCSISQVYGYGTV
Sbjct: 1 MLLQAAVQNRNVPLA-SSASYSRLLRCRSP--VVSVAALSKKTAA-IVCSISQVYGYGTV 56
Query: 202 DYERRPIIQWNAIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPN 381
DYERRPI+QWNAIYKKISLMEKPELGAASVLNQWEK GRKLTKWELCRVVKELRKYKR N
Sbjct: 57 DYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKRAN 116
Query: 382 QALEVYDWMNQRGERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLL 561
QALEVYDWMN RGERFRLSASDAAIQLDLIGKVRGI DAE+FFL LP+NFKDRRVYGSLL
Sbjct: 117 QALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGSLL 176
Query: 562 NAYVRAKSRDKAEALIDTMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIR 741
NAYVRAKSR+KAEAL++TMR KGYALHPLPFNVMMTLYMNLREY KVDAMVFEMKQKDIR
Sbjct: 177 NAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKDIR 236
Query: 742 LDIYSYNIWLSSC---SSVDQMELVYHQMKSDASINPNWTTFSTMATMYIKMGESLKAED 912
LDIYSYNIWLSSC SV++MELVY QMKSD SI PNWTTFSTMATMYIKMGE+ KAED
Sbjct: 237 LDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKAED 296
Query: 913 ALRKVEARITGRNRIPYHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLV 1092
ALRKVEARITGRNRIPYHYLLSLYGSLGNKKEL+RVW+VYKSVVPSIPNLGYHALVSSLV
Sbjct: 297 ALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSSLV 356
Query: 1093 RMGDIEGAEKVYEEWLPVKSSFDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEMGGKPSPG 1272
RMGDIEGAEKVYEEWLPVKSS+DPRIPNLLMN YVKNDQL+ AEGLFDHM+EMGGKPS
Sbjct: 357 RMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPSSS 416
Query: 1273 TWEILADGHTRKRSITQALACLKQAFSAQGSSNWRPKVLVLSGFFKLCEEESDVSSKETV 1452
TWEILA GHTRKR I++AL CL+ AFSA+GSSNWRPKVL+LSGFFKLCEEESDV+SKE V
Sbjct: 417 TWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKEAV 476
Query: 1453 LELLRQSGHLQDKSYQALIDAAE---------ENDETDVLVTQLQDDL* 1572
LELLRQSG L+DKSY ALID E + ETD L+TQLQDDL*
Sbjct: 477 LELLRQSGDLEDKSYLALIDVDENRTVNNSEIDAHETDALLTQLQDDL* 525
>TAIR9_protein||AT4G02820.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:1258581-1260265 FORWARD
Length = 533
Score = 266 bits (678), Expect = 5e-071
Identities = 142/428 (33%), Positives = 252/428 (58%), Gaps = 8/428 (1%)
Frame = +1
Query: 280 AASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAAIQ 459
A + +W++ G + K+EL R+V+ELRK KR ALE+ +WM + E +L A D A+
Sbjct: 77 AVVTIRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQ-EDIKLQAGDYAVH 135
Query: 460 LDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEALIDTMRQKGYAL 639
LDLI K+RG++ AE FF +PD + SLL++YV+ K DKAEAL + M + G+
Sbjct: 136 LDLISKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLK 195
Query: 640 HPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIWLSSCSS---VDQMELVY 810
LP+N M+++Y++ ++ KV ++ E+K + DI +YN+WL++ +S V+ E VY
Sbjct: 196 SCLPYNHMLSMYISRGQFEKVPVLIKELKIR-TSPDIVTYNLWLTAFASGNDVEGAEKVY 254
Query: 811 HQMKSDASINPNWTTFSTMATMYIKMGESLKAEDALRKVEARITGRNRIPYHYLLSLYGS 990
+ K + +NP+W T+S + +Y K KA AL+++E ++ +NR+ Y L+SL+ +
Sbjct: 255 LKAKEE-KLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHAN 313
Query: 991 LGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSFDPRI 1170
LG+K + W KS + + Y +++S++V++G+ E A+ +Y+EW V + D RI
Sbjct: 314 LGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARI 373
Query: 1171 PNLLMNVYVKNDQLDKAEGLFDHMIEMGGKPSPGTWEILADGHTRKRSITQALACLKQAF 1350
PNL++ Y+ D++ E ++ ++E G PS TWEIL + +++ + + L C +A
Sbjct: 374 PNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI 433
Query: 1351 SAQGSSNWRPKVLVLSGFFKLCEEESDVSSKETVLELLRQSGHLQDKSYQALIDAAEEND 1530
+ W V ++ G K EE+ +V E ++ LL+++G++ + Y +L+ +
Sbjct: 434 DS--VKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLLRTYAKAG 491
Query: 1531 ETDVLVTQ 1554
E ++V +
Sbjct: 492 EMALIVEE 499
>TAIR9_protein||AT1G60770.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:22366959-22368648 REVERSE
Length = 492
Score = 259 bits (660), Expect = 6e-069
Identities = 138/415 (33%), Positives = 230/415 (55%), Gaps = 7/415 (1%)
Frame = +1
Query: 238 IYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQR 417
+Y ++ E+ LNQ+ KG + + KWE+ +K+LR AL++ + M +R
Sbjct: 25 LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVMEER 84
Query: 418 GERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKA 597
G + SD AI LDL+ K R I+ E++F+ LP+ K YGSLLN Y + +KA
Sbjct: 85 G--MNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKA 142
Query: 598 EALIDTMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIW--- 768
E L++ M++ + +N +MTLY E KV AM+ E+K +++ D Y+YN+W
Sbjct: 143 EGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRA 202
Query: 769 LSSCSSVDQMELVYHQMKSDASINPNWTTFSTMATMYIKMGESLKAEDALRKVEARITGR 948
L++ + + +E V +M D + P+WTT+S MA++Y+ G S KAE AL+++E + T R
Sbjct: 203 LAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQR 262
Query: 949 NRIPYHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVY 1128
+ Y +L++LYG LG E++R+W + +P N+ Y ++ LV++ D+ GAE ++
Sbjct: 263 DFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLF 322
Query: 1129 EEWLPVKSSFDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEMGGKPSPGTWEILADGHTRK 1308
+EW S++D RI N+L+ Y + + KA L + GGK + TWEI D + +
Sbjct: 323 KEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKS 382
Query: 1309 RSITQALACLKQAFS--AQGSSNWRPKVLVLSGFFKLCEEESDVSSKETVLELLR 1467
+ +AL C+ +A S W P + E++ DV+ E +LE+L+
Sbjct: 383 GDMARALECMSKAVSIGKGDGGKWLPSPETVRALMSYFEQKKDVNGAENLLEILK 437
>TAIR9_protein||AT2G20710.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:8926110-8927722 FORWARD
Length = 491
Score = 249 bits (635), Expect = 4e-066
Identities = 145/435 (33%), Positives = 239/435 (54%), Gaps = 10/435 (2%)
Frame = +1
Query: 217 PIIQWNAIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEV 396
P+ ++ + ++++ P VL+ W G + EL ++K LRK+ R + AL++
Sbjct: 33 PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92
Query: 397 YDWMNQRGERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVR 576
DWM++ +S D AI+LDLI KV G+ +AE FF T+P ++ +YG+LLN Y
Sbjct: 93 SDWMSEH-RVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 151
Query: 577 AKSRDKAEALIDTMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYS 756
K KAE + M++ G+ LP+NVM+ LY+ +Y V+ ++ EM+ + ++ DI++
Sbjct: 152 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 211
Query: 757 YNIWL---SSCSSVDQMELVYHQMKSDASINPNWTTFSTMATMYIKMGESLKAEDALRKV 927
N L S S V+ ME + ++D ++ +W T++ A YIK G + KA + LRK
Sbjct: 212 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 271
Query: 928 EARITGRNR-IPYHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGD 1104
E + + R Y L+S YG+ G K+E++R+W++YK + N GY +++S+L++M D
Sbjct: 272 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKE-LDGFYNTGYISVISALLKMDD 330
Query: 1105 IEGAEKVYEEWLPVKSSFDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEMGGKPSPGTWEI 1284
IE EK+ EEW S FD RIP+LL+ Y K ++KAE + + +++ TWE
Sbjct: 331 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 390
Query: 1285 LADGHTRKRSITQALACLKQAFSAQGSSNWRPKVLVLSGFFKLCEEESDVSSKETVLELL 1464
LA G+ + +A+ K+A WRP +VL E + D+ +L LL
Sbjct: 391 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLL 449
Query: 1465 RQSGHLQDKSYQALI 1509
+ GH+ SY L+
Sbjct: 450 SERGHI---SYDQLL 461
>TAIR9_protein||AT4G21705.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:11533257-11534817 REVERSE
Length = 493
Score = 246 bits (626), Expect = 5e-065
Identities = 137/454 (30%), Positives = 246/454 (54%), Gaps = 7/454 (1%)
Frame = +1
Query: 223 IQWNAIYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYD 402
++ +Y KIS + P+ L W + G+K++ EL R+V +LR+ KR ALEV
Sbjct: 22 VKKTTLYSKISPLGDPKSSVYPELQNWVQCGKKVSVAELIRIVHDLRRRKRFLHALEVSK 81
Query: 403 WMNQRGERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAK 582
WMN+ G S ++ A+ LDLIG+V G AE++F L + +K+ + YG+LLN YVR +
Sbjct: 82 WMNETGVCV-FSPTEHAVHLDLIGRVYGFVTAEEYFENLKEQYKNDKTYGALLNCYVRQQ 140
Query: 583 SRDKAEALIDTMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYN 762
+ +K+ + M++ G+ L +N +M LY N+ ++ KV ++ EMK++++ D YSY
Sbjct: 141 NVEKSLLHFEKMKEMGFVTSSLTYNNIMCLYTNIGQHEKVPKVLEEMKEENVAPDNYSYR 200
Query: 763 IWLSSCSSVDQMELV---YHQMKSDASINPNWTTFSTMATMYIKMGESLKAEDALRKVEA 933
I +++ ++ +E + M+ I +W T++ A YI G+ +A + L+ E
Sbjct: 201 ICINAFGAMYDLERIGGTLRDMERRQDITMDWNTYAVAAKFYIDGGDCDRAVELLKMSEN 260
Query: 934 RITGRNRIPYHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEG 1113
R+ ++ Y++L++LY LG K E+ R+W++ K V N Y ++ SLV++ +
Sbjct: 261 RLEKKDGEGYNHLITLYARLGKKIEVLRLWDLEKDVCKRRINQDYLTVLQSLVKIDALVE 320
Query: 1114 AEKVYEEWLPVKSSFDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEMGGKPSPGTWEILAD 1293
AE+V EW + +D R+PN ++ Y+ +KAE + + + G +P +WE++A
Sbjct: 321 AEEVLTEWKSSGNCYDFRVPNTVIRGYIGKSMEEKAEAMLEDLARRGKATTPESWELVAT 380
Query: 1294 GHTRKRSITQALACLKQAFSAQ-GSSNWRPKVLVLSGFFKLCEEESDVSSKETVLELLRQ 1470
+ K ++ A C+K A + GS WRP + +++ +E + E+ + LR
Sbjct: 381 AYAEKGTLENAFKCMKTALGVEVGSRKWRPGLTLVTSVLSWVGDEGSLKEVESFVASLRN 440
Query: 1471 SGHLQDKSYQALI--DAAEENDETDVLVTQLQDD 1566
+ + Y AL+ D E D L+ +++DD
Sbjct: 441 CIGVNKQMYHALVKADIREGGRNIDTLLQRMKDD 474
>TAIR9_protein||AT5G27460.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:9693262-9694815 REVERSE
Length = 492
Score = 245 bits (623), Expect = 1e-064
Identities = 147/430 (34%), Positives = 230/430 (53%), Gaps = 10/430 (2%)
Frame = +1
Query: 244 KKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWM-NQRG 420
K+I P S+L + G ++ EL + K L + R + AL++ +WM NQ+
Sbjct: 42 KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD 101
Query: 421 ERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRV----YGSLLNAYVRAKSR 588
F S D A++LDLI K G+ E++F L + RV Y LL AYV+ K
Sbjct: 102 IEF--SVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMV 159
Query: 589 DKAEALIDTMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIW 768
+AEAL++ + G+ + P PFN MM LY +Y KV +V MK I ++ SYN+W
Sbjct: 160 KEAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLW 219
Query: 769 LSSC---SSVDQMELVYHQMKSDASINPNWTTFSTMATMYIKMGESLKAEDALRKVEARI 939
+++C S V +E VY +M D S+ W++ T+A +YIK G KA L E +
Sbjct: 220 MNACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKML 279
Query: 940 TGRNRIPYHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAE 1119
NR+ Y +L++LY SLGNK+ + R+W V KSV I + Y ++SSLV+ GD+E AE
Sbjct: 280 NRSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAE 339
Query: 1120 KVYEEWLPVKSSFDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEMGGKPSPGTWEILADGH 1299
+V+ EW ++D R+ N+L+ YV+N ++ KAE L ++E GG P+ TWEIL +G
Sbjct: 340 RVFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGW 399
Query: 1300 TRKRSITQALACLKQAFSAQGSSNWRPKVLVLSGFFKLCEEESDVSSKETVLELLRQSGH 1479
+ ++ +A+ + Q F +WRP ++ + E+E + + L + G
Sbjct: 400 VKCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEKEEKIEEATAYVRDLHRLGL 459
Query: 1480 LQDKSYQALI 1509
Y+ L+
Sbjct: 460 ASLPLYRLLL 469
>TAIR9_protein||AT1G02370.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:474516-476383 FORWARD
Length = 538
Score = 243 bits (620), Expect = 2e-064
Identities = 143/443 (32%), Positives = 234/443 (52%), Gaps = 10/443 (2%)
Frame = +1
Query: 238 IYKKISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQR 417
+YKK+S++ A LNQ+ G + K +L R K LRK++RP A E++DWM +R
Sbjct: 73 LYKKLSMLSVTGGTVAETLNQFIMEGITVRKDDLFRCAKTLRKFRRPQHAFEIFDWMEKR 132
Query: 418 GERFRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRR-VYGSLLNAYVRAKSRDK 594
+ S SD AI LDLIGK +G+ AE++F L + K+ + YG+L+N Y +K
Sbjct: 133 --KMTFSVSDHAICLDLIGKTKGLEAAENYFNNLDPSAKNHQSTYGALMNCYCVELEEEK 190
Query: 595 AEALIDTMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIWLS 774
A+A + M + + + LPFN MM++YM L + KV +V MKQ+ I +Y+IW+
Sbjct: 191 AKAHFEIMDELNFVNNSLPFNNMMSMYMRLSQPEKVPVLVDAMKQRGISPCGVTYSIWMQ 250
Query: 775 SCSS---VDQMELVYHQMKSDASINPNWTTFSTMATMYIKMGESLKAEDALRKVEARITG 945
SC S +D +E + +M D+ W TFS +A +Y K G KA+ AL+ +E ++
Sbjct: 251 SCGSLNDLDGLEKIIDEMGKDSEAKTTWNTFSNLAAIYTKAGLYEKADSALKSMEEKMNP 310
Query: 946 RNRIPYHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKV 1125
NR +H+L+SLY + E++RVW K P + NL Y ++ ++ ++GD++G +K+
Sbjct: 311 NNRDSHHFLMSLYAGISKGPEVYRVWESLKKARPEVNNLSYLVMLQAMSKLGDLDGIKKI 370
Query: 1126 YEEWLPVKSSFDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEMGGKPSPGTWEILADGHTR 1305
+ EW ++D R+ N+ +N Y+K + ++AE + D ++ P ++L
Sbjct: 371 FTEWESKCWAYDMRLANIAINTYLKGNMYEEAEKILDGAMKKSKGPFSKARQLLMIHLLE 430
Query: 1306 KRSITQALACLKQAF--SAQGSSNWRPKVLVLSGFFKLCEEESDVSSKETVLELLRQSGH 1479
A+ L+ A SA+ W ++S FF E+ DV E ++L
Sbjct: 431 NDKADLAMKHLEAAVSDSAENKDEWGWSSELVSLFFLHFEKAKDVDGAEDFCKILSNWKP 490
Query: 1480 LQDKSYQALID--AAEENDETDV 1542
L ++ LI AA E D+
Sbjct: 491 LDSETMTFLIKTYAAAEKTSPDM 513
>TAIR9_protein||AT4G01990.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:871268-872885 REVERSE
Length = 503
Score = 229 bits (583), Expect = 5e-060
Identities = 126/375 (33%), Positives = 220/375 (58%), Gaps = 7/375 (1%)
Frame = +1
Query: 124 SVAPMKKKTAAIIVCSISQVYGYGTVDYERRPIIQWNAIYKKISLMEKPELG-AASVLNQ 300
SV+ + ++ A + + +++ G + + +IYKK+S + G LNQ
Sbjct: 4 SVSRLARRFCATLATATAEISGEAAASVPTK-AKKHRSIYKKLSSLGTRGGGKMEETLNQ 62
Query: 301 WEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAAIQLDLIGKV 480
+ G + K +L R K+LRK+++P +ALE+++WM ++ F + SD AI+L+LI K
Sbjct: 63 FVMEGVPVKKHDLIRYAKDLRKFRQPQRALEIFEWMERKEIAF--TGSDHAIRLNLIAKS 120
Query: 481 RGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEALIDTMRQKGYALHPLPFNV 660
+G+ AE +F +L D+ K++ YGSLLN Y K KA+A + M + + LPFN
Sbjct: 121 KGLEAAETYFNSLDDSIKNQSTYGSLLNCYCVEKEEVKAKAHFENMVDLNHVSNSLPFNN 180
Query: 661 MMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIWLSSCSS---VDQMELVYHQMKSDA 831
+M +YM L + KV A+V MK+K I +Y++W+ SC S +D +E V +MK++
Sbjct: 181 LMAMYMGLGQPEKVPALVVAMKEKSITPCDITYSMWIQSCGSLKDLDGVEKVLDEMKAEG 240
Query: 832 SINPNWTTFSTMATMYIKMGESLKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKEL 1011
+W TF+ +A +YIK+G KAE+AL+ +E + R YH+L++LY + N E+
Sbjct: 241 EGIFSWNTFANLAAIYIKVGLYGKAEEALKSLENNMNPDVRDCYHFLINLYTGIANASEV 300
Query: 1012 FRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSFDPRIPNLLMNV 1191
+RVW++ K P++ N Y ++ +L ++ DI+G +KV+ EW ++D R+ N+ ++
Sbjct: 301 YRVWDLLKKRYPNVNNSSYLTMLRALSKLDDIDGVKKVFAEWESTCWTYDMRMANVAISS 360
Query: 1192 YVKNDQLDKAEGLFD 1236
Y+K + ++AE +F+
Sbjct: 361 YLKQNMYEEAEAVFN 375
>TAIR9_protein||AT2G20710.2 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:8926535-8927722 FORWARD
Length = 396
Score = 218 bits (555), Expect = 8e-057
Identities = 127/363 (34%), Positives = 203/363 (55%), Gaps = 9/363 (2%)
Frame = +1
Query: 433 LSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEALID 612
+S D AI+LDLI KV G+ +AE FF T+P ++ +YG+LLN Y K KAE +
Sbjct: 9 ISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYASKKVLHKAEQVFQ 68
Query: 613 TMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIWL---SSCS 783
M++ G+ LP+NVM+ LY+ +Y V+ ++ EM+ + ++ DI++ N L S S
Sbjct: 69 EMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFTVNTRLHAYSVVS 128
Query: 784 SVDQMELVYHQMKSDASINPNWTTFSTMATMYIKMGESLKAEDALRKVEARITGRNR-IP 960
V+ ME + ++D ++ +W T++ A YIK G + KA + LRK E + + R
Sbjct: 129 DVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKSEQMVNAQKRKHA 188
Query: 961 YHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWL 1140
Y L+S YG+ G K+E++R+W++YK + N GY +++S+L++M DIE EK+ EEW
Sbjct: 189 YEVLMSFYGAAGKKEEVYRLWSLYKE-LDGFYNTGYISVISALLKMDDIEEVEKIMEEWE 247
Query: 1141 PVKSSFDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEMGGKPSPGTWEILADGHTRKRSIT 1320
S FD RIP+LL+ Y K ++KAE + + +++ TWE LA G+ +
Sbjct: 248 AGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWERLALGYKMAGKME 307
Query: 1321 QALACLKQAFSAQGSSNWRPKVLVLSGFFKLCEEESDVSSKETVLELLRQSGHLQDKSYQ 1500
+A+ K+A WRP +VL E + D+ +L LL + GH+ SY
Sbjct: 308 KAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLEGQRDMEGLRKILRLLSERGHI---SYD 363
Query: 1501 ALI 1509
L+
Sbjct: 364 QLL 366
>TAIR9_protein||AT1G28020.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:9768395-9771157 REVERSE
Length = 613
Score = 194 bits (491), Expect = 2e-049
Identities = 115/321 (35%), Positives = 177/321 (55%), Gaps = 6/321 (1%)
Frame = +1
Query: 289 VLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAAIQLDL 468
VL QW + G ++ + ++K+LR + QAL+V +WM++ + L D A +L L
Sbjct: 55 VLEQWRQQGNQVNPSHVRVIIKKLRDSDQSLQALQVSEWMSKE-KICNLIPEDFAARLHL 113
Query: 469 IGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRA-KSRDKAEALIDTMRQKGYALHP 645
I V G+ +AE FF ++P N + VY SLLN+Y R+ K+ KAEA MR G L P
Sbjct: 114 IENVVGLEEAEKFFESIPKNARGDSVYTSLLNSYARSDKTLCKAEATFQKMRDLGLLLRP 173
Query: 646 LPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIWL---SSCSSVDQMELVYHQ 816
+P+N MM+LY L+ KV+ ++ EMK D+ D + N L S+ V +ME ++
Sbjct: 174 VPYNAMMSLYSALKNREKVEELLLEMKDNDVEADNVTVNNVLKLYSAVCDVTEMEKFLNK 233
Query: 817 MKSDASINPNWTTFSTMATMYIKMGESLKAEDALRKVEARITGRN-RIPYHYLLSLYGSL 993
+ I W T MA Y++ S KA LR E + ++ + Y +L+ LYG
Sbjct: 234 WEGIHGIKLEWHTTLDMAKAYLRARSSGKAMKMLRLTEQLVDQKSLKSAYDHLMKLYGEA 293
Query: 994 GNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYEEWLPVKSSFDPRIP 1173
GN++E+ RVW +YKS + N GY ++ SL+++ DI GAE++Y+ W + FD RIP
Sbjct: 294 GNREEVLRVWKLYKSKIGERDNNGYRTVIRSLLKVDDIVGAEEIYKVWESLPLEFDHRIP 353
Query: 1174 NLLMNVYVKNDQLDKAEGLFD 1236
+L + Y +KAE L +
Sbjct: 354 TMLASGYRDRGMTEKAEKLMN 374
>TAIR9_protein||AT5G09450.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:2941864-2943324 FORWARD
Length = 410
Score = 179 bits (453), Expect = 6e-045
Identities = 105/322 (32%), Positives = 177/322 (54%), Gaps = 7/322 (2%)
Frame = +1
Query: 247 KISLMEKPELGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGER 426
+I + P+ A +VL +W G ++T EL + KELR+ +R ALEV +WM Q E
Sbjct: 60 RIFRLRLPKRSATTVLEKWIGEGNQMTINELREISKELRRTRRYKHALEVTEWMVQH-EE 118
Query: 427 FRLSASDAAIQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEAL 606
++S +D A ++DLI KV GI AE +F L + K Y SLL+AY +K ++AEAL
Sbjct: 119 SKISDADYASRIDLISKVFGIDAAERYFEGLDIDSKTAETYTSLLHAYAASKQTERAEAL 178
Query: 607 ID-TMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIWLSSCS 783
+ + +N MMTLYM++ + KV ++ +KQK + DI++YN+WLSSC+
Sbjct: 179 FKRIIESDSLTFGAITYNEMMTLYMSVGQVEKVPEVIEVLKQKKVSPDIFTYNLWLSSCA 238
Query: 784 ---SVDQMELVYHQMKSDASINPNWTTFSTMATMYIKMGESLKAEDALR-KVEARITGRN 951
++D++ + +M+ DAS N W + + ++YI AE L + E I+ R
Sbjct: 239 ATFNIDELRKILEEMRHDASSNEGWVRYIDLTSIYINSSRVTNAESTLPVEAEKSISQRE 298
Query: 952 RIPYHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIEGAEKVYE 1131
I Y +L+ L+ LGNK + ++W ++ + + Y ++SS + +G + AE++
Sbjct: 299 WITYDFLMILHTGLGNKVMIDQIWKSLRNTNQILSSRSYICVLSSYLMLGHLREAEEIIH 358
Query: 1132 EWLPVKSS-FDPRIPNLLMNVY 1194
+W K++ FD ++N +
Sbjct: 359 QWKESKTTEFDASACLRILNAF 380
>TAIR9_protein||AT1G15480.1 | Symbols: | DNA binding | chr1:5318307-5320422
FORWARD
Length = 595
Score = 144 bits (363), Expect = 2e-034
Identities = 109/425 (25%), Positives = 212/425 (49%), Gaps = 27/425 (6%)
Frame = +1
Query: 274 LGAASVLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAA 453
L S L++W + G+ + E + +LRK + +AL++ +W+++ ++F + D A
Sbjct: 140 LSVGSALDKWVEQGKDTNRKEFESAMLQLRKRRMFGRALQMTEWLDE-NKQFEMEERDYA 198
Query: 454 IQLDLIGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEALIDTMRQKGY 633
+LDLI KVRG E + T+P++F+ VY +LL +V + AEA+ + M+ G+
Sbjct: 199 CRLDLISKVRGWYKGEAYIKTIPESFRGELVYRTLLANHVATSNVRTAEAVFNKMKDLGF 258
Query: 634 ALHPLPFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIWL---SSCSSVDQMEL 804
L N M+ LY + + K+ ++ +++++++ ++ +Y I + S + + ME
Sbjct: 259 PLSTFTCNQMLILYKRV-DKKKIADVLLLLEKENLKPNLNTYKILIDTKGSSNDITGMEQ 317
Query: 805 VYHQMKSDASINPNWTTFSTMATMYIKMGESLKAEDALRKVEARITGRNRIPYHYLLSLY 984
+ MKS+ + + + +A Y G KAE L+++E NR LLS+Y
Sbjct: 318 IVETMKSE-GVELDLRARALIARHYASAGLKEKAEKVLKEMEGESLEENRHMCKDLLSVY 376
Query: 985 GSLGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMGDIE---GAEKVYEEWLPVKSS 1155
G L + E+ RVW + + N Y+ ++++++ G I+ AE V+E+ L +
Sbjct: 377 GYLQREDEVRRVWKICEE------NPRYNEVLAAILAFGKIDKVKDAEAVFEKVLKMSHR 430
Query: 1156 FDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEMGGKPSPGTWEILADGHTRKRSITQALAC 1335
+ ++L+ VYV + + + + L M + G TW+ + + + +A +
Sbjct: 431 VSSNVYSVLLRVYVDHKMVSEGKDLVKQMSDSGCNIGALTWDAVIKLYVEAGEVEKAESS 490
Query: 1336 LKQAFSAQGSSNWRPKVLVLSGFFKLCEE---ESDVSSKETVLELLRQSGHLQDK--SYQ 1500
L +A S +P ++S F L E DV + E + + ++Q+G+ Q + +YQ
Sbjct: 491 LSKAIQ---SKQIKP---LMSSFMYLMHEYVRRGDVHNTEKIFQRMKQAGY-QSRFWAYQ 543
Query: 1501 ALIDA 1515
LI A
Sbjct: 544 TLIQA 548
>TAIR9_protein||AT3G15590.1 | Symbols: | DNA-binding protein, putative |
chr3:5275568-5277658 REVERSE
Length = 611
Score = 114 bits (285), Expect = 2e-025
Identities = 101/418 (24%), Positives = 191/418 (45%), Gaps = 27/418 (6%)
Frame = +1
Query: 289 VLNQWEKGGRKLTKWELCRVVKELRKYKRPNQALEVYDWMNQRGERFRLSASDAAIQLDL 468
VL +W K G+ L++ E+ + LRK K L++++W+ +F + ++ A QLDL
Sbjct: 160 VLEKWVKEGKDLSQAEVTLAIHNLRKRKSYAMCLQLWEWLG-ANTQFEFTEANYASQLDL 218
Query: 469 IGKVRGISDAEDFFLTLPDNFKDRRVYGSLLNAYVRAKSRDKAEALIDTMRQKGYALHPL 648
+ KV + AE F +P++ + VY +LL V +KAE + + M++ +
Sbjct: 219 VAKVHSLQKAEIFLKDIPESSRGEVVYRTLLANCVLKHHVNKAEDIFNKMKELKFPTSVF 278
Query: 649 PFNVMMTLYMNLREYHKVDAMVFEMKQKDIRLDIYSYNIWLSS---CSSVDQMELVYHQM 819
N ++ LY ++ + K+ ++ M++++I+ +Y+ ++S + ME + +
Sbjct: 279 ACNQLLLLY-SMHDRKKISDVLLLMERENIKPSRATYHFLINSKGLAGDITGMEKIVETI 337
Query: 820 KSDA-SINPNWTTFSTMATMYIKMGESLKAEDALRKVEARITGRNRIPY--HYLLSLYGS 990
K + ++P S +A YI+ G +A+D ++++E + G + P+ LL LY
Sbjct: 338 KEEGIELDPELQ--SILAKYYIRAGLKERAQDLMKEIEGK--GLQQTPWVCRSLLPLYAD 393
Query: 991 LGNKKELFRVWNVYKSVVPSIPNLGYHALVSSLVRMG---DIEGAEKVYEEWLPVKSSFD 1161
+G+ + R+ N Y +S++ G ++E AE V+E L K
Sbjct: 394 IGDSDNVRRLSRFVDQ------NPRYDNCISAIKAWGKLKEVEEAEAVFER-LVEKYKIF 446
Query: 1162 PRIPNL-LMNVYVKNDQLDKAEGLFDHMIEMGGKPSPGTWEILADGHTRKRSITQALACL 1338
P +P LM +Y +N L K L M G P TW L + + + +A L
Sbjct: 447 PMMPYFALMEIYTENKMLAKGRDLVKRMGNAGIAIGPSTWHALVKLYIKAGEVGKAELIL 506
Query: 1339 KQAFSAQGSSNWRPKVLVLSGFFKLCEEESDVSSKETV-LELLRQSGHLQDKSYQALI 1509
+A + RP + + DV + E V +++ R S Q Y+ ++
Sbjct: 507 NRATK---DNKMRPMFTTYMAILEEYAKRGDVHNTEKVFMKMKRASYAAQLMQYETVL 561
>TAIR9_protein||AT1G13040.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:4447647-4449200 FORWARD
Length = 518
Score = 65 bits (157), Expect = 1e-010
Identities = 54/263 (20%), Positives = 118/263 (44%), Gaps = 2/263 (0%)
Frame = +1
Query: 544 VYGSLLNAYVRAKSRDKAEALIDTMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFEM 723
VY +L++ + +A +KAEAL M + G + +NV++ Y + + + ++ EM
Sbjct: 222 VYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM 281
Query: 724 KQKDIRLDIYSYNIWLSSCSSVDQMELVYHQMKSDASINP--NWTTFSTMATMYIKMGES 897
+ I+LD YSYN L V + Y+ M + + ++ST+ + + +
Sbjct: 282 VRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNT 341
Query: 898 LKAEDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYHAL 1077
KA ++ + N + Y L+ + GN ++ + + S + Y +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401
Query: 1078 VSSLVRMGDIEGAEKVYEEWLPVKSSFDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEMGG 1257
+ L + G+++ A V+ + + + + D N L++ ++ ++ +A LF+ M
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461
Query: 1258 KPSPGTWEILADGHTRKRSITQA 1326
P T++ + G R + ++ A
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAA 484
>TAIR9_protein||AT3G09060.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:2766367-2768430 REVERSE
Length = 688
Score = 64 bits (153), Expect = 3e-010
Identities = 64/327 (19%), Positives = 140/327 (42%), Gaps = 7/327 (2%)
Frame = +1
Query: 541 RVYGSLLNAYVRAKSRDKAEALIDTMRQKGYALHPLPFNVMMTLYMNLREYHKVDAMVFE 720
R Y +LLNA+V AK K E+L G A + +NV++ + +E+ K +
Sbjct: 115 RSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDW 174
Query: 721 MKQKDIRLDIYSYNIWLSSCSSVDQME--LVYHQMKSDASINPNWTTFSTMATMYIKMGE 894
M ++ + D++SY+ ++ + +++ L S+ + P+ T ++ + ++K +
Sbjct: 175 MWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 895 SLKAEDAL-RKVEARITGRNRIPYHYLLSLYGSLGNKKELFRVWNVYKSVVPSIPNLGYH 1071
A + R +E N ++ ++S G + ++W K Y
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 1072 ALVSSLVRMGDIEGAEKVYEEWLPVKSSFDPRIPNLLMNVYVKNDQLDKAEGLFDHMIEM 1251
+L+ L G+++ AE V+ E K+S D N ++ + + ++ ++ L+ ++E
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW-RIMEH 353
Query: 1252 GGKPSPGTWEILADGHTRKRSITQALACLKQAFSAQGSSNWRPKVLVLSGFFKLCEEESD 1431
+ ++ IL G I +A + + +++ + + G LC
Sbjct: 354 KNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHG---LCVNGYV 410
Query: 1432 VSSKETVLELLRQSGHLQDKSYQALID 1512
+ + E+ GHL +Y ++ID
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIID 437
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,654,947,923
Number of Sequences: 33410
Number of Extensions: 2654947923
Number of Successful Extensions: 100633620
Number of sequences better than 0.0: 0
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