BLASTX 7.6.2
Query= UN03776 /QuerySize=1215
(1214 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G28430.1 | Symbols: | reticulon family protei... 265 7e-071
TAIR9_protein||AT2G20590.1 | Symbols: | reticulon family protei... 207 2e-053
TAIR9_protein||AT2G20590.2 | Symbols: | reticulon family protei... 137 2e-032
TAIR9_protein||AT5G58000.1 | Symbols: | LOCATED IN: endoplasmic... 102 6e-022
>TAIR9_protein||AT4G28430.1 | Symbols: | reticulon family protein |
chr4:14057846-14059772 FORWARD
Length = 458
Score = 265 bits (675), Expect = 7e-071
Identities = 148/231 (64%), Positives = 174/231 (75%), Gaps = 10/231 (4%)
Frame = -2
Query: 796 VFSQRSLMLGFCFSGFRF-CHSLRQRVTEETERREVKLSEEDVLRVARRMLPVTNFGDFR 620
VFS S LG F G F ++LRQRVTEE RRE+KLSE+DVLR+ARRMLP+TN +
Sbjct: 232 VFSAIS-YLGLLFLGVSFLSNTLRQRVTEEA-RRELKLSEDDVLRIARRMLPITNLAISK 289
Query: 619 DEPAFLWRTSNDTQSGTLCLIRAEYGYLITLWRLCALGFFLSFTVPKLYSCYASQINQKV 440
F + + L+ AEYGYLITLWRLCA GFFLSFT+PKLYSCYASQ+NQKV
Sbjct: 290 TSELFSGEPAMTLKVAPFVLMGAEYGYLITLWRLCAFGFFLSFTIPKLYSCYASQLNQKV 349
Query: 439 ENAQKRIVEAWGICTHKKFVAGSMITAFWNLTSLKIRFFTVFIIVVVIRYKWQNVQLESE 260
E AQ+R VEAWG+CTHKKFVAGS +TAFWNLTSLK RF VFIIVVVIRY+ QN+QL+SE
Sbjct: 350 ECAQRRFVEAWGVCTHKKFVAGSAVTAFWNLTSLKTRFIAVFIIVVVIRYRRQNLQLDSE 409
Query: 259 EEEE-KQQEQTQPE-EKSPSPPASPPQPIEEEEEEQALVVVVAAETQAPPK 113
+EEE KQQE+T PE +KSP ++ P+ EEEQALV+V AET+AP K
Sbjct: 410 DEEEKKQQEKTHPEQQKSPEDKSTSPR---SAEEEQALVLV--AETKAPKK 455
Score = 196 bits (498), Expect = 2e-050
Identities = 109/154 (70%), Positives = 123/154 (79%), Gaps = 6/154 (3%)
Frame = -1
Query: 1184 ARWCKTKGGQNGLFSSALPRNFRRS---SEVVV-VVEEPKPVVVLTDEKGTKPRKHKKMV 1017
AR KTKGGQNGL +S PRNFRRS SE +V E +P+VV+TDEK RK KK+
Sbjct: 98 ARRSKTKGGQNGLLASPSPRNFRRSRLRSEAMVDTKENTEPIVVVTDEKKQNQRKQKKLG 157
Query: 1016 RSKKEKQSSVPLLPSPPCLSSDLSEDVCQGDLERIRENINDLIMWRDVAKSTLRFGFGCS 837
RSKKEK SSVPLL S P SSD +DVCQGDLERIRENI+DLIMWRDVAKSTL FGFGC
Sbjct: 158 RSKKEKHSSVPLLAS-PSPSSDQPQDVCQGDLERIRENISDLIMWRDVAKSTLWFGFGCI 216
Query: 836 YFMSSCF-AKGFSFSVFSAVSHVGLLFLGVSFLS 738
F+S+CF AKGF+FSVFSA+S++GLLFLGVSFLS
Sbjct: 217 CFLSTCFAAKGFNFSVFSAISYLGLLFLGVSFLS 250
>TAIR9_protein||AT2G20590.1 | Symbols: | reticulon family protein |
chr2:8867243-8869166 REVERSE
Length = 432
Score = 207 bits (525), Expect = 2e-053
Identities = 116/227 (51%), Positives = 148/227 (65%), Gaps = 8/227 (3%)
Frame = -2
Query: 796 VFSQRSLMLGFCFSGFRFCHSLRQRVTEETERREVKLSEEDVLRVARRMLPVTNFGDFRD 617
VFS S + G ++L QR E+T +R +SE+DVLR ARR+LP TNF +
Sbjct: 204 VFSAVSNLGLVLLCGSFLSNTLCQRKNEDT-KRAFHVSEDDVLRSARRVLPATNFFISKT 262
Query: 616 EPAFLWRTSNDTQSGTLCLIRAEYGYLITLWRLCALGFFLSFTVPKLYSCYASQINQKVE 437
F S + L+ AEYG+LITLWRL A GFFLSFT+PKLYSCY QI+QKVE
Sbjct: 263 SELFSGEPSMTLKVTPFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKVE 322
Query: 436 NAQKRIVEAWGICTHKKFVAGSMITAFWNLTSLKIRFFTVFIIVVVIRYKWQNVQLESEE 257
+ RI EAWG+C+HKK +AGS +TAFWNLTS++ R F VFII+V+ RY+ QN+QL EE
Sbjct: 323 RVKTRIGEAWGVCSHKKILAGSAVTAFWNLTSIRTRIFAVFIILVIFRYRRQNLQLTPEE 382
Query: 256 ---EEEKQQEQTQPEEKSPSPPASPPQPIEEEE----EEQALVVVVA 137
E +Q+E+T P+E+ P P EEE+ EE+ALVVVVA
Sbjct: 383 VEPVENEQEEETLPQEEETVPQEEETVPQEEEQTQPSEERALVVVVA 429
Score = 137 bits (343), Expect = 2e-032
Identities = 82/145 (56%), Positives = 96/145 (66%), Gaps = 7/145 (4%)
Frame = -1
Query: 1172 KTKGGQNGLFSSALPRNFRRSSEVVVVVEEPKPVVVLTDEKGTKPRKHKKMVRSKKEKQS 993
K KGGQ L +S PRN RRS VEE + +V+ + PRK K R KK+KQS
Sbjct: 85 KGKGGQKSLLAS--PRNPRRSRRRSEAVEEKEANLVIEEIVKLPPRKRKTNGRPKKDKQS 142
Query: 992 SVPLLPSPPCLSSDLSEDVCQGDLERIRENINDLIMWRDVAKSTLRFGFGCSYFMSSCFA 813
S P P C SSDL + CQ DL I E I+DL+MWRDVAKSTL FGFGC F+SSCFA
Sbjct: 143 SAP----PLCSSSDL-PNTCQSDLNLIGEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFA 197
Query: 812 KGFSFSVFSAVSHVGLLFLGVSFLS 738
KG +FSVFSAVS++GL+ L SFLS
Sbjct: 198 KGVNFSVFSAVSNLGLVLLCGSFLS 222
>TAIR9_protein||AT2G20590.2 | Symbols: | reticulon family protein |
chr2:8867781-8869166 REVERSE
Length = 324
Score = 137 bits (343), Expect = 2e-032
Identities = 82/145 (56%), Positives = 96/145 (66%), Gaps = 7/145 (4%)
Frame = -1
Query: 1172 KTKGGQNGLFSSALPRNFRRSSEVVVVVEEPKPVVVLTDEKGTKPRKHKKMVRSKKEKQS 993
K KGGQ L +S PRN RRS VEE + +V+ + PRK K R KK+KQS
Sbjct: 85 KGKGGQKSLLAS--PRNPRRSRRRSEAVEEKEANLVIEEIVKLPPRKRKTNGRPKKDKQS 142
Query: 992 SVPLLPSPPCLSSDLSEDVCQGDLERIRENINDLIMWRDVAKSTLRFGFGCSYFMSSCFA 813
S P P C SSDL + CQ DL I E I+DL+MWRDVAKSTL FGFGC F+SSCFA
Sbjct: 143 SAP----PLCSSSDL-PNTCQSDLNLIGEIISDLVMWRDVAKSTLWFGFGCLSFLSSCFA 197
Query: 812 KGFSFSVFSAVSHVGLLFLGVSFLS 738
KG +FSVFSAVS++GL+ L SFLS
Sbjct: 198 KGVNFSVFSAVSNLGLVLLCGSFLS 222
Score = 100 bits (248), Expect = 2e-021
Identities = 59/120 (49%), Positives = 73/120 (60%), Gaps = 1/120 (0%)
Frame = -2
Query: 796 VFSQRSLMLGFCFSGFRFCHSLRQRVTEETERREVKLSEEDVLRVARRMLPVTNFGDFRD 617
VFS S + G ++L QR E+T +R +SE+DVLR ARR+LP TNF +
Sbjct: 204 VFSAVSNLGLVLLCGSFLSNTLCQRKNEDT-KRAFHVSEDDVLRSARRVLPATNFFISKT 262
Query: 616 EPAFLWRTSNDTQSGTLCLIRAEYGYLITLWRLCALGFFLSFTVPKLYSCYASQINQKVE 437
F S + L+ AEYG+LITLWRL A GFFLSFT+PKLYSCY QI+QK E
Sbjct: 263 SELFSGEPSMTLKVTPFLLLGAEYGHLITLWRLSAFGFFLSFTIPKLYSCYTHQISQKGE 322
>TAIR9_protein||AT5G58000.1 | Symbols: | LOCATED IN: endoplasmic reticulum,
chloroplast; CONTAINS InterPro DOMAIN/s: Reticulon
(InterPro:IPR003388); BEST Arabidopsis thaliana protein match is:
reticulon family protein (TAIR:AT4G28430.1); Has 1047 Blast hits to
1034 proteins in 125 species: Archae - 0; Bacteria - 2; Metazoa - 715;
Fungi - 46; Plants - 58; Viruses - 4; Other Eukaryotes - 222 (source:
NCBI BLink). | chr5:23477416-23479496 FORWARD
Length = 488
Score = 102 bits (253), Expect = 6e-022
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 7/203 (3%)
Frame = -2
Query: 772 LGFCFSGFRFC--HSLRQRVTEETERREVKLSEEDVLRVARRMLPVTNFGDFRDEPAFLW 599
+G + G F + + + EE + V + EEDV R+ R ++P N + F
Sbjct: 273 MGLIYLGLMFVLKSLIHRGMVEEERHKVVGVREEDVKRMLRLIMPYLNESLHQLRALFSG 332
Query: 598 RTSNDTQSGTLCLIRAEYGYLITLWRLCALGFFLSFTVPKLYSCYASQINQKVENAQKRI 419
S + G + + A G ITLW L GF +FT+PK++ Y++ + +R
Sbjct: 333 DPSTTLKMGVVLFVLARCGSSITLWNLAKFGFLGAFTIPKIFISYSTHFSAYGNFWMRRF 392
Query: 418 VEAWGICTHKKFVAGSMITAFWNLTSLKIRFFTVFIIVVVIRYKWQNVQL----ESEEEE 251
+AW C HKK VA ++ T WNL+S+ R + F+++V RY +Q+ + +++++E
Sbjct: 393 RDAWESCNHKKAVALALFTLVWNLSSVTARVWAAFMLLVAFRY-YQHKMIWTTDQADDDE 451
Query: 250 EKQQEQTQPEEKSPSPPASPPQP 182
+ +E+ EEK PP P
Sbjct: 452 DDNEEEEAEEEKEQVPPKHKRAP 474
Score = 61 bits (147), Expect = 1e-009
Identities = 26/56 (46%), Positives = 42/56 (75%)
Frame = -1
Query: 908 ENINDLIMWRDVAKSTLRFGFGCSYFMSSCFAKGFSFSVFSAVSHVGLLFLGVSFL 741
+++ DL+MWRDV++STL FGFG +SS +A +FS S V+++GL++LG+ F+
Sbjct: 228 QSLVDLVMWRDVSRSTLVFGFGTFLIISSSYANDLNFSFISVVAYMGLIYLGLMFV 283
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,654,947,923
Number of Sequences: 33410
Number of Extensions: 2654947923
Number of Successful Extensions: 100633620
Number of sequences better than 0.0: 0
|
