BLASTX 7.6.2
Query= UN03847 /QuerySize=793
(792 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15227957|ref|NP_179396.1| histone H1-3 [Arabidopsis thaliana] 182 6e-044
gi|297832450|ref|XP_002884107.1| hypothetical protein ARALYDRAFT... 166 3e-039
gi|189473427|gb|ACD99685.1| histone H1-like protein [Camellia si... 157 2e-036
gi|30680194|ref|NP_849970.1| histone H1-3 [Arabidopsis thaliana] 148 1e-033
gi|255629522|gb|ACU15107.1| unknown [Glycine max] 145 8e-033
gi|224097142|ref|XP_002310849.1| histone H1 [Populus trichocarpa] 145 1e-032
gi|23506611|gb|AAN37904.1| histone H1D [Nicotiana tabacum] 144 2e-032
gi|27529850|dbj|BAC53940.1| stress-inducible H1 histone-like pro... 142 7e-032
gi|255581422|ref|XP_002531519.1| histone h1/h5, putative [Ricinu... 142 7e-032
gi|729668|sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 140 2e-031
gi|5726575|gb|AAD48472.1|AF170089_1 histone H1C [Nicotiana tabacum] 140 3e-031
gi|7595978|gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum ... 139 6e-031
gi|224133758|ref|XP_002327673.1| histone H1 [Populus trichocarpa] 139 6e-031
gi|825521|emb|CAA77867.1| H1 histone-like protein [Solanum lycop... 137 2e-030
gi|225431183|ref|XP_002270241.1| PREDICTED: hypothetical protein... 137 3e-030
gi|47027093|gb|AAT08760.1| histone H1 [Hyacinthus orientalis] 133 4e-029
gi|106879565|emb|CAJ38366.1| histone H1 [Plantago major] 131 1e-028
gi|14594811|emb|CAC43291.1| putative linker histone H1 variant p... 125 1e-026
gi|116794258|gb|ABK27068.1| unknown [Picea sitchensis] 117 2e-024
gi|326514920|dbj|BAJ99821.1| predicted protein [Hordeum vulgare ... 114 1e-023
>gi|15227957|ref|NP_179396.1| histone H1-3 [Arabidopsis thaliana]
Length = 167
Score = 182 bits (461), Expect = 6e-044
Identities = 109/169 (64%), Positives = 120/169 (71%), Gaps = 25/169 (14%)
Frame = +1
Query: 136 VKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPVL 315
+KKTP A KK RKPKT THPPYFQMIKEALM LKEKNGSSPYAIAK+IEEK+K +L
Sbjct: 7 LKKTPAA-----KKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLL 61
Query: 316 PENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTRTTRQQQKKKK-------------- 453
PE+FRKTLSLQLKNSVAKGKLVKIRASYKLS+T TRQQ KK K
Sbjct: 62 PESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDKEITKRT 121
Query: 454 --METRSKKTVSKPPEMVTKKKRTAKKPRQLKSIKSP-GSKKVLRASAS 591
TR KKTVS + +KKR KK RQ KSIKS G KK ++ASA+
Sbjct: 122 RSSSTRPKKTVSVNKQ---EKKRKVKKARQPKSIKSSVGKKKAMKASAA 167
>gi|297832450|ref|XP_002884107.1| hypothetical protein ARALYDRAFT_480711
[Arabidopsis lyrata subsp. lyrata]
Length = 161
Score = 166 bits (420), Expect = 3e-039
Identities = 94/156 (60%), Positives = 110/156 (70%), Gaps = 9/156 (5%)
Frame = +1
Query: 133 TVKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPV 312
T+KKTP A KK RKPKT THPPYFQMIKEALM LKEKNGSSPYAIAK+IEEK+K +
Sbjct: 6 TLKKTPAA-----KKPRKPKTTTHPPYFQMIKEALMALKEKNGSSPYAIAKKIEEKHKSL 60
Query: 313 LPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTRTTRQQQK--KKKMETRSKKTVSK 486
LPE+FRK LSLQLKNSVAKGKLVKIRASYKLS+T TTR Q K KK M+ K+ +
Sbjct: 61 LPESFRKILSLQLKNSVAKGKLVKIRASYKLSDTTKMTTRLQDKKNKKNMKQEDKEITKR 120
Query: 487 PPEMVT--KKKRTAKKPRQLKSIKSPGSKKVLRASA 588
T KK + K +++ K K +++SA
Sbjct: 121 TRSSSTRSKKSMSVNKQEKMRKAKKARQPKSIKSSA 156
>gi|189473427|gb|ACD99685.1| histone H1-like protein [Camellia sinensis]
Length = 207
Score = 157 bits (396), Expect = 2e-036
Identities = 95/194 (48%), Positives = 119/194 (61%), Gaps = 27/194 (13%)
Frame = +1
Query: 79 VDIPQVFPLMAREKNKSPTVKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKN 258
V + +V + + P +K P KE KK R PK A+HPPYFQMIKEAL+ L EK+
Sbjct: 14 VQMEEVVVAEQSQPAEKPVKEKKPRVPKE--KKPRAPKIASHPPYFQMIKEALLALNEKS 71
Query: 259 GSSPYAIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTR---TT 429
GSSPYAIAK +EE++KPVLPENFRK L LQLKNS AKGKL+KI+ASYKLSE + TT
Sbjct: 72 GSSPYAIAKYMEEEHKPVLPENFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKDNGTT 131
Query: 430 RQQQKKKKME---------------TRSKKTVSKPPEMVTK-------KKRTAKKPRQLK 543
+ +KK + TRS K S+ + K KK T KP+QLK
Sbjct: 132 KAPMAEKKPKQARSTTTAARAGAPNTRSTKKKSETEKKTAKKVGPKKAKKATPGKPKQLK 191
Query: 544 SIKSPGSKKVLRAS 585
SIKSP +K+ +A+
Sbjct: 192 SIKSPAAKRARKAA 205
>gi|30680194|ref|NP_849970.1| histone H1-3 [Arabidopsis thaliana]
Length = 138
Score = 148 bits (372), Expect = 1e-033
Identities = 90/141 (63%), Positives = 100/141 (70%), Gaps = 20/141 (14%)
Frame = +1
Query: 220 MIKEALMNLKEKNGSSPYAIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASY 399
MIKEALM LKEKNGSSPYAIAK+IEEK+K +LPE+FRKTLSLQLKNSVAKGKLVKIRASY
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60
Query: 400 KLSETPTRTTRQQQKKKK----------------METRSKKTVSKPPEMVTKKKRTAKKP 531
KLS+T TRQQ KK K TR KKTVS + +KKR KK
Sbjct: 61 KLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVSVNKQ---EKKRKVKKA 117
Query: 532 RQLKSIKSP-GSKKVLRASAS 591
RQ KSIKS G KK ++ASA+
Sbjct: 118 RQPKSIKSSVGKKKAMKASAA 138
>gi|255629522|gb|ACU15107.1| unknown [Glycine max]
Length = 202
Score = 145 bits (365), Expect = 8e-033
Identities = 84/169 (49%), Positives = 105/169 (62%), Gaps = 10/169 (5%)
Frame = +1
Query: 88 PQVFPLMAREKNKSPTVKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSS 267
P V + K +P +K P A KE KK ++ KTA+HPPYFQMIKEAL+ L EK GSS
Sbjct: 11 PAVEKPVEEVKAPNPAKEKKPKAPKE--KKPKQAKTASHPPYFQMIKEALIALNEKGGSS 68
Query: 268 PYAIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSE------TPTRTT 429
PYAIAK +EEK+K VLP NF+K L LQLKN A+GKLVKI+ASYKL+E T T
Sbjct: 69 PYAIAKYMEEKHKAVLPANFKKILGLQLKNQAARGKLVKIKASYKLTEAAKKENTAKVTK 128
Query: 430 RQQQKKKKMETRSKKTVSKPPEMVTKKKRTAKK--PRQLKSIKSPGSKK 570
+KK+ RSK + P+ KR AKK P++ K + +P K
Sbjct: 129 ATAEKKESRPKRSKTATAAAPKKTEAVKRAAKKVGPKKTKKVSTPAKPK 177
>gi|224097142|ref|XP_002310849.1| histone H1 [Populus trichocarpa]
Length = 179
Score = 145 bits (364), Expect = 1e-032
Identities = 75/150 (50%), Positives = 99/150 (66%), Gaps = 1/150 (0%)
Frame = +1
Query: 124 KSPTVKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKY 303
++P K P +EK + KPK A HPPYFQMIKEA++ L +++GSSPYAIAK +EEK+
Sbjct: 27 ENPVKGKRPRTPREKKPRQPKPKPAAHPPYFQMIKEAILALNDESGSSPYAIAKYMEEKH 86
Query: 304 KPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET-PTRTTRQQQKKKKMETRSKKTV 480
K VLP NF+K L LQLKNS GKL+KIRASYKL E T+ + +K + +++ +
Sbjct: 87 KAVLPANFKKILGLQLKNSATGGKLIKIRASYKLPEAKKTKEVKPTTRKTRSVNKAEASA 146
Query: 481 SKPPEMVTKKKRTAKKPRQLKSIKSPGSKK 570
K KK A KP+Q KSIKSP +K+
Sbjct: 147 KKVAGAKKAKKSAAAKPKQPKSIKSPAAKR 176
>gi|23506611|gb|AAN37904.1| histone H1D [Nicotiana tabacum]
Length = 206
Score = 144 bits (361), Expect = 2e-032
Identities = 78/163 (47%), Positives = 104/163 (63%), Gaps = 5/163 (3%)
Frame = +1
Query: 112 REKNKSPTVKKTPMASKEKPKKLRKP---KTATHPPYFQMIKEALMNLKEKNGSSPYAIA 282
+ +++ P KK+ K + + +KP KT THPPYFQMIKEAL+ L EK GSSPYAIA
Sbjct: 21 KAEDQPPATKKSVKEKKPRAPREKKPKSAKTVTHPPYFQMIKEALLALNEKGGSSPYAIA 80
Query: 283 KQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET--PTRTTRQQQKKKKM 456
K +E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLS RTT +K K
Sbjct: 81 KYMEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLSVAGKKERTTASTKKVPKA 140
Query: 457 ETRSKKTVSKPPEMVTKKKRTAKKPRQLKSIKSPGSKKVLRAS 585
+T+ K ++ KK AKK + + K G+KK+ +++
Sbjct: 141 DTKKKPRSTRSTTATAKKTEVAKKAKPTQKPKKVGAKKIRKST 183
>gi|27529850|dbj|BAC53940.1| stress-inducible H1 histone-like protein [Nicotiana
tabacum]
Length = 206
Score = 142 bits (357), Expect = 7e-032
Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Frame = +1
Query: 112 REKNKSPTVKKTPMASKEKPKKLRKP---KTATHPPYFQMIKEALMNLKEKNGSSPYAIA 282
+ +++ P KK+ K + + +KP KT THPPYFQMIKEAL+ L EK GSSPYAIA
Sbjct: 21 KAEDQPPATKKSVKEKKPRAPREKKPKSAKTVTHPPYFQMIKEALLALNEKGGSSPYAIA 80
Query: 283 KQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET--PTRTTRQQQKKKKM 456
K +E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLS RTT +K K
Sbjct: 81 KYMEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLSVAGKKERTTASTKKVPKA 140
Query: 457 ETRSKKTVSKPPEMVTKKKRTAKKPRQLKSIKSPGSKKVLRAS 585
+T+ K ++ KK KK + + K G+KK+ +++
Sbjct: 141 DTKKKPRSTRSTTATAKKTEVTKKAKPTQKPKKVGAKKIRKST 183
>gi|255581422|ref|XP_002531519.1| histone h1/h5, putative [Ricinus communis]
Length = 213
Score = 142 bits (357), Expect = 7e-032
Identities = 80/172 (46%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Frame = +1
Query: 100 PLMAREKNKSPTVK--KTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPY 273
P A E+ P K K K KK ++PKTA+HPPYFQMIKEAL+ L EK+GSSPY
Sbjct: 16 PPPAAEEEAKPAEKPVKEKKTKAPKEKKPKQPKTASHPPYFQMIKEALLTLNEKSGSSPY 75
Query: 274 AIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTRTTRQQQKKKK 453
AIAK +EEK+K VLP NF+K L+LQLKNS A+GKL+KIRASYKLSE+ + + K
Sbjct: 76 AIAKYMEEKHKAVLPSNFKKILALQLKNSAARGKLIKIRASYKLSESNKKEKGTTKVPKA 135
Query: 454 METRSKKTVSKPPEMVTKKKRTAKKPRQLKSIKSPGSKKVLRASAS*STRKT 609
+ KK K P+ R + + ++ K P + + A T+KT
Sbjct: 136 AKGGDKK--PKQPKTANVSTRKTRSVNKAEAAKKPAAGATKKVGAPKKTKKT 185
>gi|729668|sp|P40267.1|H1_SOLPN RecName: Full=Histone H1
Length = 202
Score = 140 bits (352), Expect = 2e-031
Identities = 76/162 (46%), Positives = 100/162 (61%), Gaps = 5/162 (3%)
Frame = +1
Query: 109 AREKNKSPTVKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQ 288
++ K ++P K P A KE KK + K THPPYFQMIKEAL+ L EK GSSPYA+AK
Sbjct: 20 SKVKEQAPATDKKPRAPKE--KKPKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKY 77
Query: 289 IEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET---PTRTTRQQQKKKKME 459
+E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLSE T T +K K +
Sbjct: 78 MEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLPKAD 137
Query: 460 TRSKKTVSKPPEMVTKKKRTAKKPRQLKSIKSPGSKKVLRAS 585
++ K ++ KK KK + K G+K+ +++
Sbjct: 138 SKKKPRSTRATATAAKKTEVPKKAKATPKPKKVGAKRTRKST 179
>gi|5726575|gb|AAD48472.1|AF170089_1 histone H1C [Nicotiana tabacum]
Length = 206
Score = 140 bits (351), Expect = 3e-031
Identities = 77/161 (47%), Positives = 100/161 (62%), Gaps = 5/161 (3%)
Frame = +1
Query: 118 KNKSPTVKKTPMASKEKPKKLRKP---KTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQ 288
+N+ P KK+ K + + +KP KT THPPYFQMIKEAL+ L EK GSSPYAIAK
Sbjct: 23 ENQPPATKKSVKEKKPRAPREKKPKSAKTVTHPPYFQMIKEALLALNEKGGSSPYAIAKY 82
Query: 289 IEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET--PTRTTRQQQKKKKMET 462
E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLSE R T +K K ++
Sbjct: 83 TEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLSEAGKKERITASTKKVPKADS 142
Query: 463 RSKKTVSKPPEMVTKKKRTAKKPRQLKSIKSPGSKKVLRAS 585
+ K ++ KK KK + + K G+KK +++
Sbjct: 143 KKKPRSTRSATATAKKTEVPKKAKLTQKPKKVGAKKAKKSA 183
>gi|7595978|gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]
Length = 202
Score = 139 bits (349), Expect = 6e-031
Identities = 78/165 (47%), Positives = 104/165 (63%), Gaps = 6/165 (3%)
Frame = +1
Query: 109 AREKNKSPTVKKTPMASKEKPKKLRKPKTA---THPPYFQMIKEALMNLKEKNGSSPYAI 279
++ K ++P +K K + K +KPK+A THPPYFQMIKEAL+ L EK GSSPYA+
Sbjct: 15 SKVKEQAPATEKAVKEKKPRAPKEKKPKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAV 74
Query: 280 AKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTR-TTRQQQKKKKM 456
AK +E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLSE + TT + KK +
Sbjct: 75 AKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLL 134
Query: 457 ETRSKKTVSKPPEMVTKKKRT--AKKPRQLKSIKSPGSKKVLRAS 585
+ SKK T K+T KK + K G+K+ +++
Sbjct: 135 KADSKKKTRSTRATATAAKKTEVPKKAKATPKPKKVGAKRTRKST 179
>gi|224133758|ref|XP_002327673.1| histone H1 [Populus trichocarpa]
Length = 202
Score = 139 bits (349), Expect = 6e-031
Identities = 77/156 (49%), Positives = 99/156 (63%), Gaps = 3/156 (1%)
Frame = +1
Query: 124 KSPTVKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKY 303
+ P +K P +EK + KPK HPPYFQMIKEA++ L EK+GSSPYAIAK +EEK+
Sbjct: 27 EKPLKEKKPRTPREKKPRQPKPKAVAHPPYFQMIKEAILALNEKSGSSPYAIAKYMEEKH 86
Query: 304 KPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTRTTRQQQKKKKMETRSKKTVS 483
K VLP NF+K L LQLKNS A+GKL+KIRASYKLSE + K K + KKT
Sbjct: 87 KAVLPANFKKILGLQLKNSAARGKLIKIRASYKLSEAGKKEKSTTGKVSKGSSAVKKTKE 146
Query: 484 KPPEMVTKKKRTAKKPRQLKSIKSPGSKKVLRASAS 591
P M +K R+ K + K G+KK +++A+
Sbjct: 147 VKPSM--RKTRSVNK-ADAGAKKVVGAKKAKKSAAA 179
>gi|825521|emb|CAA77867.1| H1 histone-like protein [Solanum lycopersicum]
Length = 207
Score = 137 bits (344), Expect = 2e-030
Identities = 74/165 (44%), Positives = 102/165 (61%), Gaps = 6/165 (3%)
Frame = +1
Query: 109 AREKNKSPTVKKTPMASKEKPKKLRKPKTA---THPPYFQMIKEALMNLKEKNGSSPYAI 279
++ K ++ +K K + K +KPK+A THPPYFQMIKEAL++L EK GSSPYA+
Sbjct: 20 SKVKEQASATEKAVKEKKPRAPKEKKPKSAKAVTHPPYFQMIKEALLSLNEKGGSSPYAV 79
Query: 280 AKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET---PTRTTRQQQKKK 450
AK +E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLSE T T +K
Sbjct: 80 AKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLP 139
Query: 451 KMETRSKKTVSKPPEMVTKKKRTAKKPRQLKSIKSPGSKKVLRAS 585
K +++ K ++ KK KK + K G+K+ +++
Sbjct: 140 KADSKKKPRSTRATSTAAKKTEVPKKAKATPKPKKVGAKRTRKST 184
>gi|225431183|ref|XP_002270241.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 183
Score = 137 bits (343), Expect = 3e-030
Identities = 81/157 (51%), Positives = 101/157 (64%), Gaps = 12/157 (7%)
Frame = +1
Query: 130 PTVKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKP 309
P +K P A KE KK ++ + ++HPPYFQMIKEAL+ L EK+GSSPYAIAK +EEK+K
Sbjct: 27 PAPEKKPKARKE--KKPKQARASSHPPYFQMIKEALLALDEKSGSSPYAIAKHMEEKHKA 84
Query: 310 VLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTRTTRQQQKKKKMETRSKKTVSKP 489
VLP NFRK LSLQLKNSVAKG L+KI+ASYKLS T + K+ K S P
Sbjct: 85 VLPANFRKILSLQLKNSVAKGNLIKIKASYKLSGVRKGTAKSDGAKR------AKATSDP 138
Query: 490 PEMVTKKKRTAKKPRQLKSIKSPGSK----KVLRASA 588
+ KK T KK K+ K+ SK + +R+SA
Sbjct: 139 KKKSVKKSETPKKVAANKARKTVPSKVKQPRSIRSSA 175
>gi|47027093|gb|AAT08760.1| histone H1 [Hyacinthus orientalis]
Length = 161
Score = 133 bits (333), Expect = 4e-029
Identities = 72/144 (50%), Positives = 95/144 (65%), Gaps = 4/144 (2%)
Frame = +1
Query: 142 KTPMASKE-KPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPVLP 318
+ P A KE KPK +HPPYFQMIKEA++ LKEK GSSPYAIAK +E K+ VLP
Sbjct: 15 RAPKAPKEGKPKGSNSTAAPSHPPYFQMIKEAILALKEKTGSSPYAIAKYMEGKHGGVLP 74
Query: 319 ENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTRTTRQQQKKKKMETRSKKTVSKPPEM 498
NFRKTL++QL+N KGKLVK++AS++LS++ + +KKK+ + K K P +
Sbjct: 75 ANFRKTLAVQLRNFATKGKLVKVKASFRLSDS---GKTDKDRKKKISAAADKKKKKKPVV 131
Query: 499 VTKKKRTAKKPRQLKSIKSPGSKK 570
K A KP+Q KSIKS +K+
Sbjct: 132 KRAKMAAAAKPKQPKSIKSRAAKR 155
>gi|106879565|emb|CAJ38366.1| histone H1 [Plantago major]
Length = 164
Score = 131 bits (329), Expect = 1e-028
Identities = 74/158 (46%), Positives = 100/158 (63%), Gaps = 3/158 (1%)
Frame = +1
Query: 136 VKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPVL 315
V+K A++ K+ + KT HPPYF+MIKEAL+ LKE+ GSSP+AIAK +EEK+K VL
Sbjct: 7 VQKPKAAAQPAKKQSKSTKTVAHPPYFEMIKEALVALKERGGSSPHAIAKYMEEKHKAVL 66
Query: 316 PENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTRTTRQQQKKKKMETRSK-KTVSKPP 492
P NFRK L LQLKNS AKGKL+KI+ASYKL+ + ++ T+ K V KP
Sbjct: 67 PANFRKMLGLQLKNSAAKGKLIKIKASYKLAGGSAPAEKVKKPVAIAGTKRKAPEVKKPK 126
Query: 493 EMVTKKKRTAKKPRQLKSIKSPGSKKVLRASAS*STRK 606
+ V KK T KK +K + P K +++ A+ +K
Sbjct: 127 KEVAPKKMTPKK--SVKKVVKPKQPKSIKSPAAKKAKK 162
>gi|14594811|emb|CAC43291.1| putative linker histone H1 variant protein [Beta
vulgaris]
Length = 202
Score = 125 bits (312), Expect = 1e-026
Identities = 68/160 (42%), Positives = 96/160 (60%), Gaps = 3/160 (1%)
Frame = +1
Query: 115 EKNKSPTVKKTPMASKEKPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSPYAIAKQIE 294
E+ K K+K +K K +HPPYFQMIKEA++ L EK GSSPYAIAK +E
Sbjct: 26 EEKPEVDTKGRKREKKQKSSMEKKHKAPSHPPYFQMIKEAILALNEKGGSSPYAIAKFME 85
Query: 295 EKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTRTTRQQQKKKKMETRSKK 474
+K+K VLP NFRK L LQLKNSV++GKL+K++ASYKLSE + + + K + + + K
Sbjct: 86 QKHKTVLPSNFRKILGLQLKNSVSRGKLIKVKASYKLSEAGKKRSEKGSKSRSSSSSTTK 145
Query: 475 TV-SKPPEMVTKKKRTAKKPRQLKSIKSPGSKKVLRASAS 591
+ + TK++R K + + I +P + A S
Sbjct: 146 AARANAAKEPTKRRR--PKSKSVSKIDNPPVNPAITARRS 183
>gi|116794258|gb|ABK27068.1| unknown [Picea sitchensis]
Length = 212
Score = 117 bits (293), Expect = 2e-024
Identities = 65/160 (40%), Positives = 93/160 (58%), Gaps = 6/160 (3%)
Frame = +1
Query: 106 MAREKNKSPTVKKTPMASKE-----KPKKLRKPKTATHPPYFQMIKEALMNLKEKNGSSP 270
MA EK+ +P V P + K KKL + HPPYF+MIKEA++ LKE+ GSSP
Sbjct: 4 MATEKDNAPDVIVPPAIDAQPQDCPKEKKLNRRTAPVHPPYFEMIKEAILALKERGGSSP 63
Query: 271 YAIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTRTTRQQQKKK 450
AIAK +EE+YK LP N++K L++Q+K V GKL+K++AS+KL+ + +++ K
Sbjct: 64 RAIAKYMEERYKSHLPPNYKKILAVQIKKLVLAGKLIKVKASFKLAAAENKGKKEEDSAK 123
Query: 451 KMETRSKKTVSKPPEMVTKKKRTAKKPRQL-KSIKSPGSK 567
KM K MVT + KP+ K+ KS +K
Sbjct: 124 KMTGLKKNAKISSEPMVTLTSAKSAKPKVAGKTAKSAAAK 163
>gi|326514920|dbj|BAJ99821.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 269
Score = 114 bits (285), Expect = 1e-023
Identities = 67/160 (41%), Positives = 89/160 (55%), Gaps = 6/160 (3%)
Frame = +1
Query: 142 KTPMASKEKPKKLRKPK-TATHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPVLP 318
K A +KP RKP+ T HP Y +M+ EA+ LKE+ GSS AIAK +E+K+K LP
Sbjct: 40 KVKAAKAKKPSAPRKPRATPAHPTYAEMVSEAITALKERGGSSTIAIAKFVEDKHKAHLP 99
Query: 319 ENFRKTLSLQLKNSVAKGKLVKIRASYKLSETPTR-----TTRQQQKKKKMETRSKKTVS 483
NFRK LS+QLK VA GKL K++ASYKLS P + + KK K + +KK +
Sbjct: 100 ANFRKMLSVQLKKLVASGKLTKVKASYKLSAAPAKRKPAAKKKPTAKKPKAKAPAKKAAA 159
Query: 484 KPPEMVTKKKRTAKKPRQLKSIKSPGSKKVLRASAS*STR 603
K P K AK P + K+ P + +A A T+
Sbjct: 160 KSPAKKAAAKPKAKAPAKTKAAAKPKAAAKPKAKAPAKTK 199
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 475,288,458,330
Number of Sequences: 15229318
Number of Extensions: 475288458330
Number of Successful Extensions: 120006622
Number of sequences better than 0.0: 0
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