BLASTX 7.6.2
Query= UN03858 /QuerySize=1600
(1599 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q94C11|SF04_ARATH Splicing factor 4-like protein OS=Arabidops... 408 6e-113
sp|Q8IWZ8|SF04_HUMAN Splicing factor 4 OS=Homo sapiens GN=SF4 PE... 60 5e-008
sp|Q8IWX8|CHERP_HUMAN Calcium homeostasis endoplasmic reticulum ... 55 1e-006
sp|Q8CGZ0|CHERP_MOUSE Calcium homeostasis endoplasmic reticulum ... 55 1e-006
sp|Q8CH02|SF04_MOUSE Splicing factor 4 OS=Mus musculus GN=Sf4 PE... 55 1e-006
sp|Q68FU8|SF04_RAT Splicing factor 4 OS=Rattus norvegicus GN=Sf4... 55 1e-006
>sp|Q94C11|SF04_ARATH Splicing factor 4-like protein OS=Arabidopsis thaliana
GN=At3g52120 PE=2 SV=1
Length = 443
Score = 408 bits (1048), Expect = 6e-113
Identities = 203/252 (80%), Positives = 217/252 (86%), Gaps = 1/252 (0%)
Frame = +3
Query: 663 ISDCAAPPAPSDPNVKNAADKLASFVAKNGRAFENVTRQKNPGDTLFKFLFDESCADYKY 842
+SD APP PSDP VK ADKLASFVAK+GR FE++TRQKNPGDT FKFLFDE+CADYKY
Sbjct: 126 VSD-VAPPPPSDPTVKKVADKLASFVAKHGRPFEHITRQKNPGDTPFKFLFDENCADYKY 184
Query: 843 YAFRLSEEEKSISQAKESGVLHSGDGGPRMSTTPITSQKPAQQQRGYQTPASALYDASVE 1022
Y FRL+EEEK ISQ K+SGVLHSGD G R ST I QKPA QQ GYQ PASALYD VE
Sbjct: 185 YVFRLAEEEKLISQTKDSGVLHSGDAGSRTSTAAIPLQKPAYQQTGYQIPASALYDTPVE 244
Query: 1023 SGASSRSVQASVTRPNNSDSYSAPRAADPISMMEFYMKKAAQEEKMRRPRQSKDEMPPPA 1202
GASSRS QAS+TRP++SDS+S PR ADP+SMMEFYMKKAAQEEKMRRPRQSKDEMPPPA
Sbjct: 245 PGASSRSAQASITRPSDSDSFSGPRGADPLSMMEFYMKKAAQEEKMRRPRQSKDEMPPPA 304
Query: 1203 SLQGSSAIPSTDSGKRGHHMGDYIPPEELDKFLAKCDDVAALKATKEAAEKAKIQADNVG 1382
SLQG S STD GKRGHHMGDYIP EELDKFL+KC+D AA KATKEAAEKAKIQADNVG
Sbjct: 305 SLQGPSETSSTDPGKRGHHMGDYIPLEELDKFLSKCNDAAAQKATKEAAEKAKIQADNVG 364
Query: 1383 HKLLSKMGWKEG 1418
HKLLSKMGWKEG
Sbjct: 365 HKLLSKMGWKEG 376
Score = 164 bits (415), Expect = 2e-039
Identities = 97/134 (72%), Positives = 106/134 (79%), Gaps = 15/134 (11%)
Frame = +2
Query: 104 PPSIFVNDGSFMERFRQLQQEKKDEAKDKEAPHVVVEESKPVKIIISGISNPRPSSSATK 283
PPSIFVNDGSFMERFRQLQQE KD+ KDK V VE+SKPVKI ISNP+P +A K
Sbjct: 6 PPSIFVNDGSFMERFRQLQQE-KDKDKDKV---VQVEDSKPVKI----ISNPKP--AANK 55
Query: 284 TSIGFKTNDAQKKGGKLAFSLKQKSKLLAPPVKLG--EEEDDEDVQNDQSFGSAKRPKL- 454
SIG K NDAQKKGGKLAFSLKQKSKLLAPPVKLG E+EDDEDV+++Q FGS KR KL
Sbjct: 56 ISIGLKPNDAQKKGGKLAFSLKQKSKLLAPPVKLGTEEDEDDEDVKHEQGFGSVKRQKLE 115
Query: 455 --DAPAKSTKLSDV 490
D P KS K+SDV
Sbjct: 116 QRDTPVKSAKVSDV 129
>sp|Q8IWZ8|SF04_HUMAN Splicing factor 4 OS=Homo sapiens GN=SF4 PE=1 SV=2
Length = 645
Score = 60 bits (143), Expect = 5e-008
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 7/132 (5%)
Frame = +3
Query: 690 PSDPNVKNAADKLASFVAKNGRAFENVTRQKNPGDTLFKFLFDESCADYKYYAFRLSEEE 869
P D VKN A+KLA F+A G E + Q N + F FL++ + YKYY +L E
Sbjct: 258 PEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFR 317
Query: 870 KSISQAKESGVLHSGDGGPRMSTTPIT---SQKPAQQQRGYQTPASALYDASVESGASSR 1040
K ++A +G + D G + + P S PA TPA + A G +
Sbjct: 318 K--AKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGKPAS 375
Query: 1041 SVQASVTRPNNS 1076
+ A+V R S
Sbjct: 376 A--ATVKRKRKS 385
Score = 55 bits (131), Expect = 1e-006
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 13/69 (18%)
Frame = +3
Query: 1233 TDSGKRGHHMGDYIPPEELDKFLAKCDDVAALKATKEAAE-------KAKIQADNVGHKL 1391
T G+ H +GD++PP+EL+KF+ KA KE E + K+ +N+G+++
Sbjct: 516 TKMGRGKHFIGDFLPPDELEKFM------ETFKALKEGREPDYSEYKEFKLTVENIGYQM 569
Query: 1392 LSKMGWKEG 1418
L KMGWKEG
Sbjct: 570 LMKMGWKEG 578
>sp|Q8IWX8|CHERP_HUMAN Calcium homeostasis endoplasmic reticulum protein OS=Homo
sapiens GN=CHERP PE=1 SV=3
Length = 916
Score = 55 bits (132), Expect = 1e-006
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +3
Query: 681 PPAPSDPNVKNAADKLASFVAKNGRAFENVTRQKNPGDTLFKFLFDESCADYKYYAFRLS 860
P P D ++N DKLA FVA+NG FE +T +K + F FLF Y YY +L+
Sbjct: 4 PLPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEF--YSYYKCKLA 61
Query: 861 EEEKSISQAKESGVLHSGDGGPRMSTTPITSQKPAQQQRG 980
E++ + +++ L P + P+ P +G
Sbjct: 62 LEQQQLICKQQTPELEPAATMPPLPQPPLAPAAPIPPAQG 101
>sp|Q8CGZ0|CHERP_MOUSE Calcium homeostasis endoplasmic reticulum protein OS=Mus
musculus GN=Cherp PE=1 SV=1
Length = 936
Score = 55 bits (132), Expect = 1e-006
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 5/99 (5%)
Frame = +3
Query: 681 PPAPSDPNVKNAADKLASFVAKNGRAFENVTRQKNPGDTLFKFLFDESCADYKYYAFRLS 860
P P D ++N DKLA FVA+NG FE +T +K + F FLF Y YY +L+
Sbjct: 4 PMPPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLFGGEF--YSYYKCKLA 61
Query: 861 EEEKSI---SQAKESGVLHSGDGGPRMSTTPITSQKPAQ 968
E++ + QA E + P+ P S PAQ
Sbjct: 62 LEQQQLICKQQAPELEPTSAMPPLPQPPLAPTASLTPAQ 100
>sp|Q8CH02|SF04_MOUSE Splicing factor 4 OS=Mus musculus GN=Sf4 PE=1 SV=1
Length = 643
Score = 55 bits (132), Expect = 1e-006
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 13/69 (18%)
Frame = +3
Query: 1233 TDSGKRGHHMGDYIPPEELDKFLAKCDDVAALKATKEAAE-------KAKIQADNVGHKL 1391
T G+ H +GD++PP+EL+KF+ KA KE E + K+ +N+G+++
Sbjct: 514 TQMGRGKHFIGDFLPPDELEKFM------ETFKALKEGREPDYSEYKEFKLTVENIGYQM 567
Query: 1392 LSKMGWKEG 1418
L KMGWKEG
Sbjct: 568 LMKMGWKEG 576
>sp|Q68FU8|SF04_RAT Splicing factor 4 OS=Rattus norvegicus GN=Sf4 PE=2 SV=1
Length = 644
Score = 55 bits (132), Expect = 1e-006
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 13/69 (18%)
Frame = +3
Query: 1233 TDSGKRGHHMGDYIPPEELDKFLAKCDDVAALKATKEAAE-------KAKIQADNVGHKL 1391
T G+ H +GD++PP+EL+KF+ KA KE E + K+ +N+G+++
Sbjct: 515 TQMGRGKHFIGDFLPPDELEKFM------ETFKALKEGREPDYSEYKEFKLTVENIGYQM 568
Query: 1392 LSKMGWKEG 1418
L KMGWKEG
Sbjct: 569 LMKMGWKEG 577
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,545,185,555
Number of Sequences: 518415
Number of Extensions: 16545185555
Number of Successful Extensions: 102511304
Number of sequences better than 0.0: 0
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