BLASTX 7.6.2
Query= UN03945 /QuerySize=1273
(1272 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G26770.2 | Symbols: | unknown protein | chr5:... 549 2e-156
TAIR9_protein||AT5G26770.1 | Symbols: | unknown protein | chr5:... 549 2e-156
TAIR9_protein||AT3G05830.1 | Symbols: | Encodes alpha-helical I... 441 4e-124
TAIR9_protein||AT5G26770.3 | Symbols: | unknown protein | chr5:... 418 7e-117
TAIR9_protein||AT1G09470.1 | Symbols: | unknown protein | chr1:... 347 1e-095
TAIR9_protein||AT1G09483.1 | Symbols: | unknown protein | chr1:... 104 1e-022
TAIR9_protein||AT3G16000.1 | Symbols: MFP1 | MFP1 (MAR BINDING F... 62 7e-010
TAIR9_protein||AT5G65770.1 | Symbols: LINC4 | LINC4 (LITTLE NUCL... 57 2e-008
TAIR9_protein||AT5G65770.2 | Symbols: LINC4 | LINC4 (LITTLE NUCL... 57 2e-008
TAIR9_protein||AT5G16730.1 | Symbols: | LOCATED IN: chloroplast... 50 3e-006
>TAIR9_protein||AT5G26770.2 | Symbols: | unknown protein | chr5:9407981-9409735
REVERSE
Length = 336
Score = 549 bits (1413), Expect = 2e-156
Identities = 281/336 (83%), Positives = 307/336 (91%), Gaps = 4/336 (1%)
Frame = -3
Query: 1159 MSDSSKKAVDPLLRDLDGKKESFRRNVVSMAAELKQVKGRLVSQEQFFAKESLSRKEAET 980
MSDS K VDPLL+DLDGKKESFRRNVVSMAAELKQV+GRLVSQEQFF KES RKEAE
Sbjct: 1 MSDSVKTTVDPLLKDLDGKKESFRRNVVSMAAELKQVRGRLVSQEQFFVKESFCRKEAEK 60
Query: 979 KAKNMEREICKLQKTLEDRNCQLEASTSAATKFLEEVDDLRSQLALTKELAETSSASAQS 800
KAKNME EICKLQK LEDRNC+L ASTSAA KFLEEVDDLRSQLALTK++AETS+ASAQS
Sbjct: 61 KAKNMEMEICKLQKKLEDRNCELVASTSAAEKFLEEVDDLRSQLALTKDIAETSAASAQS 120
Query: 799 AQLQCTMLSEQLDDKTCLLREHEDRVTQLGHQLDNLQRDLKTRECSQKQLRDEVTRIERE 620
AQLQC++L+EQLDDKT LREHEDRVT LGHQLDNLQRDLKTRECSQKQLR+EV RIERE
Sbjct: 121 AQLQCSVLTEQLDDKTRSLREHEDRVTHLGHQLDNLQRDLKTRECSQKQLREEVMRIERE 180
Query: 619 I----AKSGKDTECELRRLVEEVSPKNLERVNMLLGAKDEEIAKLKDEIRLMSGHWKLKA 452
I AKSGK TECELR+L+EEVSPKN ER+NMLL KDEEIAKLKD+++LMS HWKLK
Sbjct: 181 ITEAVAKSGKGTECELRKLLEEVSPKNFERMNMLLAVKDEEIAKLKDDVKLMSAHWKLKT 240
Query: 451 KELESQLEKQRRTDKELRKKVLKMEFCLQEARSQTRKLQRMGEKRDKAMKELRDQVTGKQ 272
KELESQLE+QRR D+EL+KKVLK+EFCLQEARSQTRKLQR GE+RDKA+KEL DQ+TGKQ
Sbjct: 241 KELESQLERQRRADQELKKKVLKLEFCLQEARSQTRKLQRAGERRDKAIKELSDQITGKQ 300
Query: 271 MNESVSGEKQNFWDTSGFKIVVSMSMLILVVVSKR* 164
+NESVSGEKQNFWDTSGFKIVVSMSMLILV++SKR*
Sbjct: 301 LNESVSGEKQNFWDTSGFKIVVSMSMLILVIISKR* 336
>TAIR9_protein||AT5G26770.1 | Symbols: | unknown protein | chr5:9407981-9409735
REVERSE
Length = 336
Score = 549 bits (1413), Expect = 2e-156
Identities = 281/336 (83%), Positives = 307/336 (91%), Gaps = 4/336 (1%)
Frame = -3
Query: 1159 MSDSSKKAVDPLLRDLDGKKESFRRNVVSMAAELKQVKGRLVSQEQFFAKESLSRKEAET 980
MSDS K VDPLL+DLDGKKESFRRNVVSMAAELKQV+GRLVSQEQFF KES RKEAE
Sbjct: 1 MSDSVKTTVDPLLKDLDGKKESFRRNVVSMAAELKQVRGRLVSQEQFFVKESFCRKEAEK 60
Query: 979 KAKNMEREICKLQKTLEDRNCQLEASTSAATKFLEEVDDLRSQLALTKELAETSSASAQS 800
KAKNME EICKLQK LEDRNC+L ASTSAA KFLEEVDDLRSQLALTK++AETS+ASAQS
Sbjct: 61 KAKNMEMEICKLQKKLEDRNCELVASTSAAEKFLEEVDDLRSQLALTKDIAETSAASAQS 120
Query: 799 AQLQCTMLSEQLDDKTCLLREHEDRVTQLGHQLDNLQRDLKTRECSQKQLRDEVTRIERE 620
AQLQC++L+EQLDDKT LREHEDRVT LGHQLDNLQRDLKTRECSQKQLR+EV RIERE
Sbjct: 121 AQLQCSVLTEQLDDKTRSLREHEDRVTHLGHQLDNLQRDLKTRECSQKQLREEVMRIERE 180
Query: 619 I----AKSGKDTECELRRLVEEVSPKNLERVNMLLGAKDEEIAKLKDEIRLMSGHWKLKA 452
I AKSGK TECELR+L+EEVSPKN ER+NMLL KDEEIAKLKD+++LMS HWKLK
Sbjct: 181 ITEAVAKSGKGTECELRKLLEEVSPKNFERMNMLLAVKDEEIAKLKDDVKLMSAHWKLKT 240
Query: 451 KELESQLEKQRRTDKELRKKVLKMEFCLQEARSQTRKLQRMGEKRDKAMKELRDQVTGKQ 272
KELESQLE+QRR D+EL+KKVLK+EFCLQEARSQTRKLQR GE+RDKA+KEL DQ+TGKQ
Sbjct: 241 KELESQLERQRRADQELKKKVLKLEFCLQEARSQTRKLQRAGERRDKAIKELSDQITGKQ 300
Query: 271 MNESVSGEKQNFWDTSGFKIVVSMSMLILVVVSKR* 164
+NESVSGEKQNFWDTSGFKIVVSMSMLILV++SKR*
Sbjct: 301 LNESVSGEKQNFWDTSGFKIVVSMSMLILVIISKR* 336
>TAIR9_protein||AT3G05830.1 | Symbols: | Encodes alpha-helical IF (intermediate
filament)-like protein. | chr3:1736796-1738565 FORWARD
Length = 337
Score = 441 bits (1134), Expect = 4e-124
Identities = 232/337 (68%), Positives = 275/337 (81%), Gaps = 5/337 (1%)
Frame = -3
Query: 1159 MSDSSKKAVDPLLRDLDGKKESFRRNVVSMAAELKQVKGRLVSQEQFFAKESLSRKEAET 980
MS S K VDPLLRDLD KKESFRRNVVS+A ELKQV+GRLVSQEQ F KE+++RKEAE
Sbjct: 1 MSYSEKTTVDPLLRDLDEKKESFRRNVVSLATELKQVRGRLVSQEQSFLKETITRKEAEK 60
Query: 979 KAKNMEREICKLQKTLEDRNCQLEASTSAATKFLEEVDDLRSQLALTKELAETSSASAQS 800
+ KNME EICKLQK LE+RNCQLEAS SAA KF++E+++ R +L TK+ AE S+ SAQS
Sbjct: 61 RGKNMEMEICKLQKRLEERNCQLEASASAADKFIKELEEFRLKLDTTKQTAEASADSAQS 120
Query: 799 AQLQCTMLSEQLDDKTCLLREHEDRVTQLGHQLDNLQRDLKTRECSQKQLRDEVTRIERE 620
++QC+ML +QLDDKT LRE EDR+TQLGHQLD+LQR L RECS+KQLR+EV RIERE
Sbjct: 121 TKIQCSMLKQQLDDKTRSLREQEDRMTQLGHQLDDLQRGLSLRECSEKQLREEVRRIERE 180
Query: 619 ----IAKSG-KDTECELRRLVEEVSPKNLERVNMLLGAKDEEIAKLKDEIRLMSGHWKLK 455
IAK+G + EL++L+E+VSP ER+N L+ KDEEI KLKDEIRLMSG WK K
Sbjct: 181 VTEAIAKAGIGGMDSELQKLLEDVSPMKFERMNRLVEVKDEEITKLKDEIRLMSGQWKHK 240
Query: 454 AKELESQLEKQRRTDKELRKKVLKMEFCLQEARSQTRKLQRMGEKRDKAMKELRDQVTGK 275
KELESQLEKQRRTD++L+KKVLK+EFCLQEARSQTRKLQR GE+RD +KE+RD ++ K
Sbjct: 241 TKELESQLEKQRRTDQDLKKKVLKLEFCLQEARSQTRKLQRKGERRDMEIKEIRDLISEK 300
Query: 274 QMNESVSGEKQNFWDTSGFKIVVSMSMLILVVVSKR* 164
Q + S +KQ FWD SGFKIVVSMSML+LVVVSKR*
Sbjct: 301 QNLNNESWDKQKFWDNSGFKIVVSMSMLMLVVVSKR* 337
>TAIR9_protein||AT5G26770.3 | Symbols: | unknown protein | chr5:9407981-9409735
REVERSE
Length = 316
Score = 418 bits (1072), Expect = 7e-117
Identities = 223/303 (73%), Positives = 252/303 (83%), Gaps = 17/303 (5%)
Frame = -3
Query: 1159 MSDSSKKAVDPLLRDLDGKKESFRRNVVSMAAELKQVKGRLVSQEQFFAKESLSRKEAET 980
MSDS K VDPLL+DLDGKKESFRRNVVSMAAELKQV+GRLVSQEQFF KES RKEAE
Sbjct: 1 MSDSVKTTVDPLLKDLDGKKESFRRNVVSMAAELKQVRGRLVSQEQFFVKESFCRKEAEK 60
Query: 979 KAKNMEREICKLQKTLEDRNCQLEASTSAATKFLEEVDDLRSQLALTKELAETSSASAQS 800
KAKNME EICKLQK LEDRNC+L ASTSAA KFLEEVDDLRSQLALTK++AETS+ASAQS
Sbjct: 61 KAKNMEMEICKLQKKLEDRNCELVASTSAAEKFLEEVDDLRSQLALTKDIAETSAASAQS 120
Query: 799 AQLQCTMLSEQLDDKTCLLREHEDRVTQLGHQLDNLQRDLKTRECSQKQLRDEVTRIERE 620
AQLQC++L+EQLDDKT LREHEDRVT LGHQLDNLQRDLKTRECSQKQLR+EV RIERE
Sbjct: 121 AQLQCSVLTEQLDDKTRSLREHEDRVTHLGHQLDNLQRDLKTRECSQKQLREEVMRIERE 180
Query: 619 I----AKSGKDTECELRRLVEEVSPKNLERVNMLLGAKDEEIAKLKDEIRLMSGHWKLKA 452
I AKSGK TECELR+L+EEVSPKN ER+NMLL KDEEIAKLKD+++LMS HWKLK
Sbjct: 181 ITEAVAKSGKGTECELRKLLEEVSPKNFERMNMLLAVKDEEIAKLKDDVKLMSAHWKLKT 240
Query: 451 KELESQLEKQRRTDKELRKKVLKMEFCLQEARSQTRKLQRMGEKRDKAM-KELRDQVTGK 275
KELESQLE+QRR D+EL+KK + R+ + + E D+ K+L + V+G+
Sbjct: 241 KELESQLERQRRADQELKKK------------AGERRDKAIKELSDQITGKQLNESVSGE 288
Query: 274 QMN 266
+ N
Sbjct: 289 KQN 291
Score = 125 bits (313), Expect = 7e-029
Identities = 83/274 (30%), Positives = 144/274 (52%), Gaps = 12/274 (4%)
Frame = -3
Query: 967 MEREICKLQKTLEDRNCQLEASTSAATKFLEEVDDLRSQLALTKELAETSSASAQSAQLQ 788
++ C+ + + +N ++E K ++++D +L + AE + Q
Sbjct: 49 VKESFCRKEAEKKAKNMEME-----ICKLQKKLEDRNCELVASTSAAEKFLEEVDDLRSQ 103
Query: 787 CTMLSEQLDDKTCLLREHEDRVTQLGHQLDNLQRDLKTRECSQKQLRDEVTRIEREIAKS 608
+ + + + + + + L QLD+ R L+ E L ++ ++R++ K+
Sbjct: 104 LALTKDIAETSAASAQSAQLQCSVLTEQLDDKTRSLREHEDRVTHLGHQLDNLQRDL-KT 162
Query: 607 GKDTECELRRLVEEVSPKNLERVNMLLGAKDEEIAKLKDEI-----RLMSGHWKLKAKEL 443
+ ++ +LR V + + E V + E+ KL +E+ M+ +K +E+
Sbjct: 163 RECSQKQLREEVMRIEREITEAVAKSGKGTECELRKLLEEVSPKNFERMNMLLAVKDEEI 222
Query: 442 ESQLEKQRRTDKELRKKVLKMEFCLQEARSQTRKL-QRMGEKRDKAMKELRDQVTGKQMN 266
+ + + K ++E L+ R ++L ++ GE+RDKA+KEL DQ+TGKQ+N
Sbjct: 223 AKLKDDVKLMSAHWKLKTKELESQLERQRRADQELKKKAGERRDKAIKELSDQITGKQLN 282
Query: 265 ESVSGEKQNFWDTSGFKIVVSMSMLILVVVSKR* 164
ESVSGEKQNFWDTSGFKIVVSMSMLILV++SKR*
Sbjct: 283 ESVSGEKQNFWDTSGFKIVVSMSMLILVIISKR* 316
>TAIR9_protein||AT1G09470.1 | Symbols: | unknown protein | chr1:3055391-3056931
REVERSE
Length = 337
Score = 347 bits (889), Expect = 1e-095
Identities = 175/327 (53%), Positives = 245/327 (74%), Gaps = 4/327 (1%)
Frame = -3
Query: 1132 DPLLRDLDGKKESFRRNVVSMAAELKQVKGRLVSQEQFFAKESLSRKEAETKAKNMEREI 953
DPLL+DL KK+SFRRNVVS+A ELK+ + RL QE+ +KE++SR+EAET+ K ME E+
Sbjct: 11 DPLLKDLSEKKQSFRRNVVSLATELKEARTRLAEQERSCSKEAMSRQEAETRVKRMEDEM 70
Query: 952 CKLQKTLEDRNCQLEASTSAATKFLEEVDDLRSQLALTKELAETSSASAQSAQLQCTMLS 773
+L K L ++ Q+ AS A KF++E+ D++SQLA T AE S+ SA+SA C +LS
Sbjct: 71 HELAKELNEKVEQIRASDVATEKFVKELADIKSQLAATHATAEASALSAESAHSHCRVLS 130
Query: 772 EQLDDKTCLLREHEDRVTQLGHQLDNLQRDLKTRECSQKQLRDEVTRIEREIAKS----G 605
+QL ++T L+EHED+VT+LG QL+NL+++L+ RE SQKQLRDE+ ++E +I ++
Sbjct: 131 KQLHERTGSLKEHEDQVTRLGEQLENLRKELRVRESSQKQLRDELLKVEGDIMRAVSVVK 190
Query: 604 KDTECELRRLVEEVSPKNLERVNMLLGAKDEEIAKLKDEIRLMSGHWKLKAKELESQLEK 425
E+R ++ E +PKN ER+N LL AKD+EIA+L+DE++++S HW+ K KELE Q+E
Sbjct: 191 TKENSEVRNMLNEDTPKNSERINKLLTAKDDEIARLRDELKIISAHWRFKTKELEDQVEN 250
Query: 424 QRRTDKELRKKVLKMEFCLQEARSQTRKLQRMGEKRDKAMKELRDQVTGKQMNESVSGEK 245
QRR D+EL+KKVLK+EFCL+E R QTRKLQ+MGE+ D A++EL++Q+ K+ +E+
Sbjct: 251 QRRIDQELKKKVLKLEFCLRETRIQTRKLQKMGERNDVAIQELKEQLAAKKQHEADHSSN 310
Query: 244 QNFWDTSGFKIVVSMSMLILVVVSKR* 164
QN WD SGFKIVVSMSMLILV S+R*
Sbjct: 311 QNLWDKSGFKIVVSMSMLILVAFSRR* 337
>TAIR9_protein||AT1G09483.1 | Symbols: | unknown protein | chr1:3060992-3061729
REVERSE
Length = 113
Score = 104 bits (259), Expect = 1e-022
Identities = 53/97 (54%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = -3
Query: 478 MSGHWKLKAKELESQLEKQRRTDKELRKKVLKMEFCLQEARSQTRKLQRMGEKRDKAMKE 299
MS HW K KELE Q+E QRR D+EL+KKVLK+EFCL+E R QTRKLQ+MGE+ D A++E
Sbjct: 1 MSAHWTFKTKELEDQVENQRRIDQELKKKVLKLEFCLRETRIQTRKLQKMGERNDMAIQE 60
Query: 298 -LRDQVTGKQMNESVSGEKQNFWD--TSGFKIVVSMS 197
L +Q+ K+ +E+ QN WD S +VV MS
Sbjct: 61 VLNEQLAAKKQHEADLSSNQNLWDKSASSVPLVVFMS 97
>TAIR9_protein||AT3G16000.1 | Symbols: MFP1 | MFP1 (MAR BINDING FILAMENT-LIKE
PROTEIN 1); DNA binding | chr3:5431041-5433613 REVERSE
Length = 727
Score = 62 bits (149), Expect = 7e-010
Identities = 63/304 (20%), Positives = 139/304 (45%), Gaps = 12/304 (3%)
Frame = -3
Query: 1123 LRDLDGKKESFRRNVVSMAAELKQVKGRLVSQEQFFAKESLSRKEAETKAKNMEREICKL 944
L+D + K + F ++ AELK++ + A+ L K+ + + + E+
Sbjct: 278 LKDSEEKAQRFNASLAKKEAELKELNSIYTQTSRDLAEAKLEIKQQKEELIRTQSELDSK 337
Query: 943 QKTLEDRNCQLEASTSAATKFLEEVDDLRSQLALTKELAETSSAS----AQSAQLQCTML 776
+E+ N ++ + +++++D + + K +ET +A+ + + L
Sbjct: 338 NSAIEELNTRITTLVAEKESYIQKLDSISKDYSALKLTSETQAAADAELISRKEQEIQQL 397
Query: 775 SEQLDDKTCLLREHEDRVTQLGHQLDNLQRDLKTRECSQKQLRDEVTRIEREIAKSGKDT 596
+E LD + + +D+V L + ++ +R L + K LR E+ ++ + ++ +D
Sbjct: 398 NENLDRALDDVNKSKDKVADLTEKYEDSKRMLDIELTTVKNLRHELEGTKKTL-QASRDR 456
Query: 595 ECELRRLVEEVSPKNLERVNMLLGAKDEEIAKLKD--EIRLMSGHWK--LKAKELESQLE 428
+L +++E S ++ L EE + K+ E L + K + A EL + +
Sbjct: 457 VSDLETMLDE-SRALCSKLESELAIVHEEWKEAKERYERNLDAEKQKNEISASELALEKD 515
Query: 427 KQRRTDKELRKKVLKMEFCLQEARSQTRKLQRMGEKRDKAMKELRDQ-VTGKQMNESVSG 251
+RR EL +++ + +S ++L + +K + + KEL ++ T +N+ V G
Sbjct: 516 LRRRVKDELEGVTHELKESSVKNQSLQKELVEIYKKVETSNKELEEEKKTVLSLNKEVKG 575
Query: 250 -EKQ 242
EKQ
Sbjct: 576 MEKQ 579
>TAIR9_protein||AT5G65770.1 | Symbols: LINC4 | LINC4 (LITTLE NUCLEI4) |
chr5:26311587-26315610 FORWARD
Length = 1011
Score = 57 bits (137), Expect = 2e-008
Identities = 63/281 (22%), Positives = 136/281 (48%), Gaps = 21/281 (7%)
Frame = -3
Query: 1087 RNVVSMAAELKQVKGRLVSQEQFFAKESLSRKEAETKAKNMEREICKLQKTLEDRNCQLE 908
+N+V+ ++ + L +++ K L +++ T ++ + + + LE +
Sbjct: 435 KNLVATEEDINRKTTMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETS 494
Query: 907 ASTSAATKFLEEVDDLRSQLALTKELAETSSASAQSAQLQCTMLSEQLDDKTCLLREHED 728
++ K EE+DDLR+Q + LAE + A+ + E +D K LR+ +
Sbjct: 495 ELSTLEMKLKEELDDLRAQ--KLEMLAEADRLKVEKAKFEAEW--EHIDVKREELRKEAE 550
Query: 727 RVTQLGHQLDNLQRDLKTRECSQKQLRDEV-TRIEREIAKSGKDTECELRRLVEE----V 563
+T+ Q + LK + K+ RD + + + ++ ++ E + ++VEE +
Sbjct: 551 YITR---QREAFSMYLKDERDNIKEERDALRNQHKNDVESLNREREEFMNKMVEEHSEWL 607
Query: 562 SPKNLERVNMLLGAKDEE------IAKLKDEIRLMSGHWKLKAKELESQLEKQR-RTDKE 404
S ER + LLG + ++ I ++E+ S + KA E E +LE++R ++ KE
Sbjct: 608 SKIQRERADFLLGIEMQKRELEYCIENKREELE-NSSRDREKAFEQEKKLEEERIQSLKE 666
Query: 403 LRKKVLK-MEFCLQEARSQTRKLQRMGEKRDKAMKELRDQV 284
+ +K L+ ++ L+ ++ +++ E+R++ EL+D V
Sbjct: 667 MAEKELEHVQVELKRLDAERLEIKLDRERREREWAELKDSV 707
>TAIR9_protein||AT5G65770.2 | Symbols: LINC4 | LINC4 (LITTLE NUCLEI4) |
chr5:26311587-26315544 FORWARD
Length = 1043
Score = 57 bits (137), Expect = 2e-008
Identities = 63/281 (22%), Positives = 136/281 (48%), Gaps = 21/281 (7%)
Frame = -3
Query: 1087 RNVVSMAAELKQVKGRLVSQEQFFAKESLSRKEAETKAKNMEREICKLQKTLEDRNCQLE 908
+N+V+ ++ + L +++ K L +++ T ++ + + + LE +
Sbjct: 462 KNLVATEEDINRKTTMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETS 521
Query: 907 ASTSAATKFLEEVDDLRSQLALTKELAETSSASAQSAQLQCTMLSEQLDDKTCLLREHED 728
++ K EE+DDLR+Q + LAE + A+ + E +D K LR+ +
Sbjct: 522 ELSTLEMKLKEELDDLRAQ--KLEMLAEADRLKVEKAKFEAEW--EHIDVKREELRKEAE 577
Query: 727 RVTQLGHQLDNLQRDLKTRECSQKQLRDEV-TRIEREIAKSGKDTECELRRLVEE----V 563
+T+ Q + LK + K+ RD + + + ++ ++ E + ++VEE +
Sbjct: 578 YITR---QREAFSMYLKDERDNIKEERDALRNQHKNDVESLNREREEFMNKMVEEHSEWL 634
Query: 562 SPKNLERVNMLLGAKDEE------IAKLKDEIRLMSGHWKLKAKELESQLEKQR-RTDKE 404
S ER + LLG + ++ I ++E+ S + KA E E +LE++R ++ KE
Sbjct: 635 SKIQRERADFLLGIEMQKRELEYCIENKREELE-NSSRDREKAFEQEKKLEEERIQSLKE 693
Query: 403 LRKKVLK-MEFCLQEARSQTRKLQRMGEKRDKAMKELRDQV 284
+ +K L+ ++ L+ ++ +++ E+R++ EL+D V
Sbjct: 694 MAEKELEHVQVELKRLDAERLEIKLDRERREREWAELKDSV 734
>TAIR9_protein||AT5G16730.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Spectrin/alpha-actinin (InterPro:IPR018159); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G02930.1); Has 241703 Blast hits to 112530 proteins in 2711
species: Archae - 2642; Bacteria - 41887; Metazoa - 104467; Fungi -
18239; Plants - 8786; Viruses - 1373; Other Eukaryotes - 64309 (source:
NCBI BLink). | chr5:5497890-5500775 FORWARD
Length = 854
Score = 50 bits (118), Expect = 3e-006
Identities = 64/274 (23%), Positives = 121/274 (44%), Gaps = 31/274 (11%)
Frame = -3
Query: 1123 LRDLDGKKESFRRNVVSMAAELKQVKGRLVSQEQFFAKESLSRKEAETKAKNMEREICKL 944
L+ + + S ++ ELKQ K A++ + + KA+ E ++
Sbjct: 107 LKKANERISSLEKDKAKALDELKQAKKE--------AEQVTLKLDDALKAQKHVEENSEI 158
Query: 943 QKTLEDRNCQLEASTSAATKFLEEVDDLRSQ--------LALTKELAETSSASAQSAQLQ 788
+K + +EA + + +E++ +++Q +A+ +EL + + A + +
Sbjct: 159 EK-FQAVEAGIEAVQNNEEELKKELETVKNQHASDSAALVAVRQELEKINEELAAAFDAK 217
Query: 787 CTMLSEQLDDKTCLLREHEDRVTQLGHQLDNLQRDL-KTRECSQKQLRDEVTRIEREIAK 611
LS Q +D + H ++V L +L L+ L TRE + + V ++E EI
Sbjct: 218 SKALS-QAEDASKTAEIHAEKVDILSSELTRLKALLDSTREKTAISDNEMVAKLEDEIVV 276
Query: 610 SGKDTECELRRLVEEVSPKNL--ERVNMLLGAKDEEIAKL-KDEIRLMSGHWKLKAKELE 440
+D E R EV K + E++N+ D E AK+ + +S W+ KAKELE
Sbjct: 277 LKRDLE-SARGFEAEVKEKEMIVEKLNV-----DLEAAKMAESNAHSLSNEWQSKAKELE 330
Query: 439 SQLEKQRRTDKELRKKVLKMEFCLQEARSQTRKL 338
QLE+ + + R + +E +++ KL
Sbjct: 331 EQLEEANKLE---RSASVSLESVMKQLEGSNDKL 361
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,697,531,610
Number of Sequences: 33410
Number of Extensions: 2697531610
Number of Successful Extensions: 100667620
Number of sequences better than 0.0: 0
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