BLASTX 7.6.2
Query= UN04007 /QuerySize=963
(962 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G41380.1 | Symbols: | FUNCTIONS IN: molecular... 298 4e-081
TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological... 113 2e-025
TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-re... 80 1e-015
TAIR9_protein||AT5G59990.1 | Symbols: | FUNCTIONS IN: molecular... 80 2e-015
TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular... 77 1e-014
TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular... 77 1e-014
TAIR9_protein||AT3G12890.1 | Symbols: ASML2 | ASML2 (ACTIVATOR O... 69 4e-012
TAIR9_protein||AT4G27900.1 | Symbols: | FUNCTIONS IN: molecular... 67 2e-011
TAIR9_protein||AT4G27900.2 | Symbols: | FUNCTIONS IN: molecular... 67 2e-011
TAIR9_protein||AT5G53420.1 | Symbols: | FUNCTIONS IN: molecular... 65 6e-011
TAIR9_protein||AT5G53420.2 | Symbols: | FUNCTIONS IN: molecular... 65 6e-011
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 55 8e-008
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 52 4e-007
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 52 7e-007
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 52 7e-007
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 49 3e-006
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 49 3e-006
>TAIR9_protein||AT5G41380.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro
DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G63820.1); Has 952 Blast
hits to 949 proteins in 72 species: Archae - 0; Bacteria - 0; Metazoa -
12; Fungi - 2; Plants - 890; Viruses - 0; Other Eukaryotes - 48
(source: NCBI BLink). | chr5:16562129-16563553 REVERSE
Length = 308
Score = 298 bits (762), Expect = 4e-081
Identities = 163/226 (72%), Positives = 184/226 (81%), Gaps = 20/226 (8%)
Frame = -3
Query: 873 ASSDLYIFDGSSSSSSSIFRNSSPDMFSSDTTTTTDLFCNNELYSVDESLNMFDHFTP-H 697
+S+D YIFDGSSSSSSS+FRNSSPDMFSSDTTTTTDLFCNNELYSV+ESLN+FDHFTP H
Sbjct: 3 SSTDFYIFDGSSSSSSSVFRNSSPDMFSSDTTTTTDLFCNNELYSVEESLNIFDHFTPQH 62
Query: 696 ILSSSPPSDLLGTLTLSHQTPTGLYPNF-----SDAVKTEQYYGGSGHNQTETVASMARS 532
ILSSSPPSDLLGTL+LS PTGLYPNF SDAVKTE+++ GHNQ A+MARS
Sbjct: 63 ILSSSPPSDLLGTLSLSQHIPTGLYPNFSDFQISDAVKTEKFF--DGHNQ---AATMARS 117
Query: 531 YSAIENAGRYMQRSFSTNSVDGKPNQIPFSNVQIMDSFNLHYNTLNSPENDFFSGQMMRR 352
YS IEN+GRYMQRSFS+NSV+GK Q+PF N+ +MDS NL YN L+SPEN FFS Q MRR
Sbjct: 118 YSTIENSGRYMQRSFSSNSVEGKQTQVPF-NIPMMDSSNLSYNNLSSPENAFFSSQ-MRR 175
Query: 351 VYSTGDLQNTRKNVVEQRSSE----PFPDAQNLKVGRYSAEDVKRR 226
VYSTGDLQN N+ QRSSE PF + QN KVGRYSAE+ K +
Sbjct: 176 VYSTGDLQN---NMEMQRSSENSTMPFSEEQNFKVGRYSAEERKEK 218
Score = 142 bits (356), Expect = 5e-034
Identities = 69/79 (87%), Positives = 73/79 (92%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEIVEIPPIEDEDTELW 59
RKEKISKYRAKRN RNFTKTIKYACRKTLADSRP IRGRFARNDE+VEIP IED+D+ELW
Sbjct: 215 RKEKISKYRAKRNQRNFTKTIKYACRKTLADSRPRIRGRFARNDEVVEIPNIEDDDSELW 274
Query: 58 KLDGLHEENEAFGSSFVVQ 2
KLDGLHE+ EA SSFVVQ
Sbjct: 275 KLDGLHEKEEASVSSFVVQ 293
>TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower,
root; EXPRESSED DURING: petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G41380.1); Has 907 Blast hits to 907 proteins in 64 species:
Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 882; Viruses
- 0; Other Eukaryotes - 24 (source: NCBI BLink). |
chr1:23682529-23684050 REVERSE
Length = 294
Score = 113 bits (281), Expect = 2e-025
Identities = 55/77 (71%), Positives = 61/77 (79%), Gaps = 6/77 (7%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEIVEIPPI------ED 77
RKEKISKYRAKR RNFTKTIKYACRKTLAD+RP +RGRFARNDE+ E P I ++
Sbjct: 192 RKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFARNDEVFENPKIASSFTRQE 251
Query: 76 EDTELWKLDGLHEENEA 26
D +LW LDGLHEE EA
Sbjct: 252 NDDDLWNLDGLHEEEEA 268
Score = 103 bits (256), Expect = 2e-022
Identities = 65/105 (61%), Positives = 74/105 (70%), Gaps = 16/105 (15%)
Frame = -3
Query: 867 SDLYIFDGSSSSSSSIFRNSSPDMFSSDTTTTTDLFCNNELY--SVD--ESLNMFDHFTP 700
SDLYIFDG SSSSSSI ++ PDMFSSDTTTTTDL+CNN S+D +SL+ F+ FTP
Sbjct: 3 SDLYIFDG-SSSSSSICHSTDPDMFSSDTTTTTDLYCNNPYLNPSMDDHQSLSFFESFTP 61
Query: 699 ---HILSSSPPSDLLGTLTLSHQTPTGLYPNFS-----DAVKTEQ 589
HILSSSPP L TLTL+H T +PNFS D VKTEQ
Sbjct: 62 TTHHILSSSPPISQLQTLTLTH---TNSFPNFSGFENFDTVKTEQ 103
Score = 49 bits (115), Expect = 4e-006
Identities = 29/53 (54%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Frame = -3
Query: 450 PFSNVQIMDSFNL-HYNTLNSPENDFFSGQMMRRVYSTGDLQNTRKNVVEQRS 295
PF + DS N + N LNSPE+ FFS MRRVYSTGDLQN ++ QRS
Sbjct: 109 PFDAPFMEDSSNFQNQNLLNSPEDSFFSDH-MRRVYSTGDLQNLGRDFTGQRS 160
>TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-related |
chr1:1221757-1224235 REVERSE
Length = 387
Score = 80 bits (197), Expect = 1e-015
Identities = 46/88 (52%), Positives = 55/88 (62%), Gaps = 10/88 (11%)
Frame = -2
Query: 259 GTLQC*GRKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEIVE----- 95
G L RKEKI +Y KRN RNF+K IKYACRKTLADSRP +RGRFA+NDE E
Sbjct: 281 GKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDEFGEPNRQA 340
Query: 94 -IPPIEDEDTELWKLDGLHEENEAFGSS 14
ED+D ++ G+ EE + SS
Sbjct: 341 CSSHHEDDDDDV----GVKEEEQLVDSS 364
>TAIR9_protein||AT5G59990.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex, stem, leaf whorl,
flower; EXPRESSED DURING: petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G41380.1); Has 918 Blast hits to 918 proteins in 64 species:
Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 885; Viruses
- 0; Other Eukaryotes - 32 (source: NCBI BLink). |
chr5:24151206-24153084 REVERSE
Length = 242
Score = 80 bits (196), Expect = 2e-015
Identities = 38/46 (82%), Positives = 40/46 (86%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEI 101
+KEKI KYR+KRN RNF K IKY CRKTLADSRP IRGRFARNDEI
Sbjct: 163 KKEKIEKYRSKRNLRNFNKRIKYECRKTLADSRPRIRGRFARNDEI 208
>TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7691 Blast hits to 4729 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 114; Plants
- 918; Viruses - 0; Other Eukaryotes - 6478 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 411
Score = 77 bits (189), Expect = 1e-014
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEIVE 95
RKEKI +Y KRN RNF K IKYACRKTLADSRP +RGRFA+NDE E
Sbjct: 311 RKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGE 358
>TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7688 Blast hits to 4734 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 118; Plants
- 919; Viruses - 0; Other Eukaryotes - 6470 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 410
Score = 77 bits (189), Expect = 1e-014
Identities = 36/48 (75%), Positives = 39/48 (81%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEIVE 95
RKEKI +Y KRN RNF K IKYACRKTLADSRP +RGRFA+NDE E
Sbjct: 310 RKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAKNDEFGE 357
>TAIR9_protein||AT3G12890.1 | Symbols: ASML2 | ASML2 (ACTIVATOR OF
SPOMIN::LUC2); transcription activator | chr3:4099223-4100277 FORWARD
Length = 252
Score = 69 bits (167), Expect = 4e-012
Identities = 33/69 (47%), Positives = 42/69 (60%)
Frame = -2
Query: 292 GAVSRRAELEGGTLQC*GRKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFAR 113
G + + G RK++I +Y K+N RNF KTIKY CRKTLAD R +RGRFAR
Sbjct: 121 GGIQAEPNTKVGRYSVEERKDRIMRYLKKKNQRNFNKTIKYVCRKTLADRRVRVRGRFAR 180
Query: 112 NDEIVEIPP 86
N++ E P
Sbjct: 181 NNDTCEEQP 189
>TAIR9_protein||AT4G27900.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT
domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G53420.1); Has 876 Blast hits to 876
proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 853; Viruses - 0; Other Eukaryotes - 23 (source: NCBI
BLink). | chr4:13890858-13892777 FORWARD
Length = 262
Score = 67 bits (161), Expect = 2e-011
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEI 101
R+EK+S+YR K++ RNF + IKYACRK LADS+P IRGRFA+ +E+
Sbjct: 214 RREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEM 259
>TAIR9_protein||AT4G27900.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT
domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G53420.1); Has 876 Blast hits to 876
proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 853; Viruses - 0; Other Eukaryotes - 23 (source: NCBI
BLink). | chr4:13890858-13892777 FORWARD
Length = 262
Score = 67 bits (161), Expect = 2e-011
Identities = 29/46 (63%), Positives = 39/46 (84%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEI 101
R+EK+S+YR K++ RNF + IKYACRK LADS+P IRGRFA+ +E+
Sbjct: 214 RREKLSRYRNKKSKRNFGRKIKYACRKALADSQPRIRGRFAKTEEM 259
>TAIR9_protein||AT5G53420.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT
domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G27900.2); Has 863 Blast hits to 863
proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 840; Viruses - 0; Other Eukaryotes - 23 (source: NCBI
BLink). | chr5:21673683-21675469 FORWARD
Length = 265
Score = 65 bits (157), Expect = 6e-011
Identities = 27/45 (60%), Positives = 38/45 (84%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDE 104
R+EK+S+Y+ K++ RNF + IKYACRK LADS+P +RGRFA+ +E
Sbjct: 218 RREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 262
>TAIR9_protein||AT5G53420.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: CCT
domain (InterPro:IPR010402); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G27900.2); Has 863 Blast hits to 863
proteins in 62 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 840; Viruses - 0; Other Eukaryotes - 23 (source: NCBI
BLink). | chr5:21674700-21675469 FORWARD
Length = 186
Score = 65 bits (157), Expect = 6e-011
Identities = 27/45 (60%), Positives = 38/45 (84%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDE 104
R+EK+S+Y+ K++ RNF + IKYACRK LADS+P +RGRFA+ +E
Sbjct: 139 RREKLSRYKNKKSRRNFGRKIKYACRKALADSQPRVRGRFAKTEE 183
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 55 bits (130), Expect = 8e-008
Identities = 24/45 (53%), Positives = 33/45 (73%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDE 104
R+ ++ +YR KR +R F KTI+YA RK A+SRP I+GRFA+ E
Sbjct: 285 REARVLRYREKRKNRKFEKTIRYASRKAYAESRPRIKGRFAKRTE 329
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 52 bits (124), Expect = 4e-007
Identities = 23/48 (47%), Positives = 33/48 (68%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEIVE 95
R+ ++ +YR KR +R F KTI+YA RK A+ RP I+GRFA+ + E
Sbjct: 339 REARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDTNE 386
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 52 bits (122), Expect = 7e-007
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDE 104
R+ ++ +YR KR +R F KTI+YA RK A+ RP I+GRFA+ +
Sbjct: 229 REARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 52 bits (122), Expect = 7e-007
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDEIVE 95
R+ ++ +YR K+ R F KTI+YA RK A+ RP I+GRFA+ ++ E
Sbjct: 286 REARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKDVDE 333
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 49 bits (116), Expect = 3e-006
Identities = 22/45 (48%), Positives = 31/45 (68%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARNDE 104
R+ ++ +YR K+ R F KTI+YA RK A+ RP I+GRFA+ E
Sbjct: 278 REARVLRYREKKKTRKFDKTIRYASRKAYAEIRPRIKGRFAKRIE 322
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 49 bits (116), Expect = 3e-006
Identities = 21/44 (47%), Positives = 30/44 (68%)
Frame = -2
Query: 238 RKEKISKYRAKRNHRNFTKTIKYACRKTLADSRPGIRGRFARND 107
R+ ++ +YR KR R F KTI+YA RK A+ RP + GRFA+ +
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKRE 349
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,740,526,862
Number of Sequences: 33410
Number of Extensions: 2740526862
Number of Successful Extensions: 100678362
Number of sequences better than 0.0: 0
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