BLASTX 7.6.2
Query= UN04041 /QuerySize=1548
(1547 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G51540.1 | Symbols: | INVOLVED IN: biological... 589 3e-168
TAIR9_protein||AT3G27220.1 | Symbols: | kelch repeat-containing... 460 2e-129
>TAIR9_protein||AT1G51540.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: Golgi apparatus; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043),
Kelch repeat type 1 (InterPro:IPR006652), Kelch repeat type 2
(InterPro:IPR011498), Kelch related (InterPro:IPR013089), Kelch-type
beta propeller (InterPro:IPR015915); BEST Arabidopsis thaliana protein
match is: kelch repeat-containing protein (TAIR:AT3G27220.1); Has 1571
Blast hits to 1365 proteins in 151 species: Archae - 11; Bacteria -
200; Metazoa - 1128; Fungi - 24; Plants - 53; Viruses - 41; Other
Eukaryotes - 114 (source: NCBI BLink). | chr1:19115702-19117381
FORWARD
Length = 416
Score = 589 bits (1516), Expect = 3e-168
Identities = 271/289 (93%), Positives = 280/289 (96%)
Frame = +3
Query: 483 IYNFVDNKWGGRFDMPKEMAHSHLGMVTDGRFIYIVTGQYGPQCRGPTAKTFVLDTDTNT 662
IYNF DN WGGRF+MPK+MAHSHLGMVTDGR+IYIVTGQ+GPQCRGPTAKTFVLDTDTNT
Sbjct: 128 IYNFTDNSWGGRFNMPKDMAHSHLGMVTDGRYIYIVTGQFGPQCRGPTAKTFVLDTDTNT 187
Query: 663 WSDFISLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKEWRSEIP 842
W DF+ LPVPRYAPATQLWRGRLHVMGGSKENR TPGLEHWSIAVKDGK+LE EWRSEIP
Sbjct: 188 WKDFVPLPVPRYAPATQLWRGRLHVMGGSKENRFTPGLEHWSIAVKDGKSLENEWRSEIP 247
Query: 843 IPRGGPHRACVVVDDRLFVIGGQEGDFMAKPGSPIFKCSRRLEVVFSDVYMLDEEMKWKV 1022
IPRGGPHRACVVVDDRLFVIGGQEGDFMAKPGSPIFKCSRR+EVVFSDVYMLDEEMKWKV
Sbjct: 248 IPRGGPHRACVVVDDRLFVIGGQEGDFMAKPGSPIFKCSRRMEVVFSDVYMLDEEMKWKV 307
Query: 1023 MPPMPKPDSHIEFAWKVVNNSIVIVGGTTEKHPETKKMVLVGEIFQFNLNTMKWYVIGKL 1202
MPPMPKPDSHIEFAWKVVNNSIVIVGGTTEKHPETKKMVLVGEIFQFNLNT+KWYVIGKL
Sbjct: 308 MPPMPKPDSHIEFAWKVVNNSIVIVGGTTEKHPETKKMVLVGEIFQFNLNTLKWYVIGKL 367
Query: 1203 PYRVKTTLVGYWDGQLYFTSGQRDKGPDDPGPRKVIAEMWRTKLILNP* 1349
PYRVKTTL GYWDGQLYFTSGQRDKGPDDP PRKV+AEMWRTKLILNP*
Sbjct: 368 PYRVKTTLAGYWDGQLYFTSGQRDKGPDDPAPRKVMAEMWRTKLILNP* 416
Score = 160 bits (404), Expect = 2e-039
Identities = 85/126 (67%), Positives = 99/126 (78%), Gaps = 6/126 (4%)
Frame = +1
Query: 127 KQSYGRLVLVSCLALLALGLVADFLWASSHRFSPA---SGTYLPSPVIEKLPP---ESNK 288
KQ YG++VLVSC+ALLA GL+ADFLWA+SHRFS A +G LPS + + P + K
Sbjct: 4 KQKYGKVVLVSCIALLATGLIADFLWATSHRFSSAAISAGLSLPSSLTTVIVPGQEKDTK 63
Query: 289 KKDKEGKERKLSATFQDLDAPQL*WEKMAAAPVPRLDGAAIQIRNLLYVFAGYGNINLVY 468
KK KERKLS TFQDL AP+L WEKMAA+PVPRLDGAAIQIR+LLYVFAGYG I+LV+
Sbjct: 64 KKKDSVKERKLSNTFQDLPAPELKWEKMAASPVPRLDGAAIQIRDLLYVFAGYGTIDLVH 123
Query: 469 SHVYIY 486
SHV IY
Sbjct: 124 SHVDIY 129
>TAIR9_protein||AT3G27220.1 | Symbols: | kelch repeat-containing protein |
chr3:10051742-10053594 REVERSE
Length = 427
Score = 460 bits (1181), Expect = 2e-129
Identities = 207/284 (72%), Positives = 246/284 (86%), Gaps = 1/284 (0%)
Frame = +3
Query: 483 IYNFVDNKWGGRFDMPKEMAHSHLGMVTDGRFIYIVTGQYGPQCRGPTAKTFVLDTDTNT 662
++NF DNKW RF PKEMA+SHLG+VTDGR++Y+V+GQ GPQCRGPT+++FVLD+ T T
Sbjct: 142 VFNFTDNKWCDRFHTPKEMANSHLGIVTDGRYVYVVSGQLGPQCRGPTSRSFVLDSFTKT 201
Query: 663 WSDFISLPVPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALEKEWRSEIP 842
W +F SLP PRYAPATQ+WRGRLHVMGGSKENR+ +HWSIAVKDGKAL+ EWR E+P
Sbjct: 202 WLEFPSLPAPRYAPATQIWRGRLHVMGGSKENRNAVAFDHWSIAVKDGKALD-EWREEVP 260
Query: 843 IPRGGPHRACVVVDDRLFVIGGQEGDFMAKPGSPIFKCSRRLEVVFSDVYMLDEEMKWKV 1022
IPRGGPHRACVV +D+L VIGGQEGDFMAKP SPIFKCSRR E+ +VYM+DEEMKWK+
Sbjct: 261 IPRGGPHRACVVANDKLLVIGGQEGDFMAKPNSPIFKCSRRREIFNGEVYMMDEEMKWKM 320
Query: 1023 MPPMPKPDSHIEFAWKVVNNSIVIVGGTTEKHPETKKMVLVGEIFQFNLNTMKWYVIGKL 1202
+PPMPK +SHIE AW +VNNSIVIVGGTT+ HP TK++VLVGEIF+F L+T+ W VIG+L
Sbjct: 321 LPPMPKNNSHIESAWIIVNNSIVIVGGTTDWHPVTKRLVLVGEIFRFQLDTLTWSVIGRL 380
Query: 1203 PYRVKTTLVGYWDGQLYFTSGQRDKGPDDPGPRKVIAEMWRTKL 1334
PYRVKT + G+W+G LYFTSGQRD+GPD+P P KVI EMWRTKL
Sbjct: 381 PYRVKTAMAGFWNGYLYFTSGQRDRGPDNPQPGKVIGEMWRTKL 424
Score = 86 bits (210), Expect = 8e-017
Identities = 41/81 (50%), Positives = 59/81 (72%), Gaps = 3/81 (3%)
Frame = +1
Query: 244 LPSPVIEKLPPESNKKKDKEGKERKLSATFQDLDAPQL*WEKMAAAPVPRLDGAAIQIRN 423
+ S +++K +SN KD R LSA F D+ AP+L WE+M +APVPRLDG ++QI N
Sbjct: 66 IDSKIVQKRSKQSNDTKD---HVRFLSAIFADIPAPELKWEEMESAPVPRLDGYSVQINN 122
Query: 424 LLYVFAGYGNINLVYSHVYIY 486
LLYVF+GYG+++ V+SHV ++
Sbjct: 123 LLYVFSGYGSLDYVHSHVDVF 143
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,740,526,862
Number of Sequences: 33410
Number of Extensions: 2740526862
Number of Successful Extensions: 100678362
Number of sequences better than 0.0: 0
|
