BLASTX 7.6.2
Query= UN04051 /QuerySize=1218
(1217 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G22920.1 | Symbols: ATNYE1, NYE1 | NYE1 (NON-Y... 477 7e-135
TAIR9_protein||AT4G11910.1 | Symbols: | INVOLVED IN: biological... 378 5e-105
TAIR9_protein||AT4G11911.1 | Symbols: | FUNCTIONS IN: molecular... 356 2e-098
TAIR9_protein||AT1G44000.1 | Symbols: | unknown protein | chr1:... 169 4e-042
>TAIR9_protein||AT4G22920.1 | Symbols: ATNYE1, NYE1 | NYE1 (NON-YELLOWING 1) |
chr4:12016776-12017969 REVERSE
Length = 269
Score = 477 bits (1227), Expect = 7e-135
Identities = 232/272 (85%), Positives = 252/272 (92%), Gaps = 3/272 (1%)
Frame = +3
Query: 318 MCSLSASLLLPTKLKPAFSDNRSNSNSNSSLFLANTRSKRKSHSIVPMARLFGPALFESS 497
MCSLSA +LLPTKLKPA+SD RSNS+S+SSLF N RSK+K+ SIVP+ARLFGPA+FESS
Sbjct: 1 MCSLSAIMLLPTKLKPAYSDKRSNSSSSSSLFFNNRRSKKKNQSIVPVARLFGPAIFESS 60
Query: 498 KLKVLFLGVDEKKHPLTLPRTYTLTHSDITAKLTLAISHSINNSQLQGWANKLYRDEVVA 677
KLKVLFLGVDEKKHP TLPRTYTLTHSDITAKLTLAIS SINNSQLQGWAN+LYRDEVVA
Sbjct: 61 KLKVLFLGVDEKKHPSTLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANRLYRDEVVA 120
Query: 678 EWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYYIFCKELPVVLKAFVHGDVNLLNHHPEL 857
EWKKVKGKMSLHVHCHISGGHFLLDLFAKFRY+IFCKELPVVLKAFVHGD NLLN++PEL
Sbjct: 121 EWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYFIFCKELPVVLKAFVHGDGNLLNNYPEL 180
Query: 858 QEALVFVYFHSNVNEFNRVECWGPLWEATSPDGRHRTQTLPERQCVDECSCCAPPVSSIP 1037
QEALV+VYFHSNVNEFN+VECWGPLWEA SPDG H+T+TLPE +C DECSCC P VSSIP
Sbjct: 181 QEALVWVYFHSNVNEFNKVECWGPLWEAVSPDG-HKTETLPEARCADECSCCFPTVSSIP 239
Query: 1038 WSHSLSNNEGVDSYYSGTQVEGMSTPNPEKL* 1133
WSHSLS NEGV+ YSGTQ EG++TPNPEKL*
Sbjct: 240 WSHSLS-NEGVNG-YSGTQTEGIATPNPEKL* 269
>TAIR9_protein||AT4G11910.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein
match is: NYE1 (NON-YELLOWING 1) (TAIR:AT4G22920.1); Has 130 Blast hits
to 128 proteins in 45 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr4:7156435-7157839 FORWARD
Length = 272
Score = 378 bits (969), Expect = 5e-105
Identities = 189/275 (68%), Positives = 215/275 (78%), Gaps = 12/275 (4%)
Frame = +3
Query: 318 MCSLSASLLLPTKLKPAFSDNRSNSNSNSSLFLANTRSKRKSHSIVPMARLFGPALFESS 497
MCSL+ +LLLP+K+KP F + S SSL + RSK K+ SIVP+ARLFGPA+FE+S
Sbjct: 1 MCSLATNLLLPSKMKPVFPEKL----STSSLCVTTRRSKMKNRSIVPVARLFGPAIFEAS 56
Query: 498 KLKVLFLGVDEKKHPLTLPRTYTLTHSDITAKLTLAISHSINNSQLQGWANKLYRDEVVA 677
KLKVLFLGVDEKKHP LPRTYTLTHSDITAKLTLAIS SINNSQLQGWANKL+RDEVV
Sbjct: 57 KLKVLFLGVDEKKHPAKLPRTYTLTHSDITAKLTLAISQSINNSQLQGWANKLFRDEVVG 116
Query: 678 EWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYYIFCKELPVVLKAFVHGDVNLLNHHPEL 857
EWKKVKGKMSLHVHCHISGGHF L+L AK RYYIFCKELPVVL+AF HGD LLN+HPEL
Sbjct: 117 EWKKVKGKMSLHVHCHISGGHFFLNLIAKLRYYIFCKELPVVLEAFAHGDEYLLNNHPEL 176
Query: 858 QEALVFVYFHSNVNEFNRVECWGPLWEATSP---DGR--HRTQTLPERQCVDECSCCAPP 1022
QE+ V+VYFHSN+ E+N+VECWGPLWEA S DGR +++TLPE C DEC CC P
Sbjct: 177 QESPVWVYFHSNIPEYNKVECWGPLWEAMSQHQHDGRTHKKSETLPELPCPDECKCCFPT 236
Query: 1023 VSSIPWSHSLSNNEGVDSYYSGTQVEGMSTPNPEK 1127
VS+IPWSH + D + +E PNP K
Sbjct: 237 VSTIPWSHRHYQHTAADENVADGLLE---IPNPGK 268
>TAIR9_protein||AT4G11911.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; BEST Arabidopsis thaliana protein match is: NYE1
(NON-YELLOWING 1) (TAIR:AT4G22920.1); Has 130 Blast hits to 128
proteins in 45 species: Archae - 0; Bacteria - 50; Metazoa - 0; Fungi -
0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
| chr4:7158150-7159440 FORWARD
Length = 274
Score = 356 bits (913), Expect = 2e-098
Identities = 176/252 (69%), Positives = 199/252 (78%), Gaps = 6/252 (2%)
Frame = +3
Query: 318 MCSLSASLLLPTKLKPAFSDNRSNSNSNSSLFLANTRSKRKSHSIVPMARLFGPALFESS 497
MCSL ASLLLP LKP FSD +S+ S+ SKRK S+ P+ARLFG A+FE+S
Sbjct: 1 MCSLMASLLLPANLKPDFSDKERSSSIPST----TRSSKRKKQSMFPVARLFGQAIFEAS 56
Query: 498 KLKVLFLGVDEKKHPLTLPRTYTLTHSDITAKLTLAISHSINNSQLQGWANKLYRDEVVA 677
KL V FLGVDEKKHP LPRTYT THSDITAKLTLAISHSINNSQLQGWAN+LYRDEVVA
Sbjct: 57 KLNVKFLGVDEKKHPPNLPRTYTFTHSDITAKLTLAISHSINNSQLQGWANRLYRDEVVA 116
Query: 678 EWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYYIFCKELPVVLKAFVHGDVNLLNHHPEL 857
EW+KVK MSLHVHCHISG HFLLDL A+ RY+IFCKELP+VLKAFVHGD N+LN++PEL
Sbjct: 117 EWRKVKSNMSLHVHCHISGDHFLLDLIAELRYFIFCKELPMVLKAFVHGDENMLNNYPEL 176
Query: 858 QEALVFVYFHSNVNEFNRVECWGPLWEATSPDG--RHRTQTLPERQCVDECSCCAPPVSS 1031
EA V+VYFHSN+ +FN+VECWG L EATS DG + LPE C D+CSCC P VS+
Sbjct: 177 HEAFVWVYFHSNIPKFNKVECWGRLCEATSHDGCKTPTCEILPEPPCFDKCSCCFPTVST 236
Query: 1032 IPWSHSLSNNEG 1067
IPWSHS + G
Sbjct: 237 IPWSHSHGCSHG 248
>TAIR9_protein||AT1G44000.1 | Symbols: | unknown protein |
chr1:16708201-16709521 REVERSE
Length = 261
Score = 169 bits (427), Expect = 4e-042
Identities = 90/173 (52%), Positives = 116/173 (67%), Gaps = 9/173 (5%)
Frame = +3
Query: 465 RLFGP-ALFESSKLKVLFLG---VDEKKHPLTLPRTYTLTHSDITAKLTLAISHSINNSQ 632
RL P A F+SSKLKV FLG ++ + PRTY L+H D TA LTL IS+ IN Q
Sbjct: 65 RLLVPQANFDSSKLKVEFLGELLENKSNGGIITPRTYILSHCDFTANLTLTISNVINLDQ 124
Query: 633 LQGWANKLYRDEVVAEWKKVKGKMSLHVHCHISGGHFLLDLFAKFRYYIFCKELPVVLKA 812
L+GW K D+VVAEWKKV ++ LH+HC +SG L D+ A+ RY+IF KELP+VLKA
Sbjct: 125 LEGWYKK---DDVVAEWKKVNDELRLHIHCCVSGMSLLQDVAAELRYHIFSKELPLVLKA 181
Query: 813 FVHGDVNLLNHHPELQEALVFVYFHSNVNEFNRVECWGPLWEAT--SPDGRHR 965
VHGD + +PEL +A V+VYFHS+ ++NR+ECWGPL +A G H+
Sbjct: 182 VVHGDSVMFRENPELMDAYVWVYFHSSTPKYNRIECWGPLKDAAKGKQQGNHQ 234
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,740,526,862
Number of Sequences: 33410
Number of Extensions: 2740526862
Number of Successful Extensions: 100678362
Number of sequences better than 0.0: 0
|
