BLASTX 7.6.2
Query= UN04150 /QuerySize=902
(901 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacti... 402 2e-112
TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTI... 357 5e-099
TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTI... 357 5e-099
TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protei... 320 7e-088
TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CI... 301 6e-082
TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding... 300 1e-081
TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding... 300 1e-081
TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protei... 297 1e-080
TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RN... 282 3e-076
TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interac... 263 1e-070
>TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacting Domain 9);
RNA binding / protein binding | chr3:4849788-4851601 FORWARD
Length = 328
Score = 402 bits (1031), Expect = 2e-112
Identities = 198/207 (95%), Positives = 203/207 (98%)
Frame = -2
Query: 900 GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLR 721
GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLA LFSNCGQVVDCRICGDPHSVLR
Sbjct: 122 GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVLR 181
Query: 720 FAFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 541
FAFVEFADDQGAH+ALSLGGTMLG+YPVRVLPSKTAILPVNPTFLPRSEDEREMC+RTIY
Sbjct: 182 FAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIY 241
Query: 540 CTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMV 361
CTNIDKKVSQAD+RNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSA ALNCSGMV
Sbjct: 242 CTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSALSALNCSGMV 301
Query: 360 IGSQPIRVSPSKTPVRPRITRPPSTN* 280
+GSQPIRVSPSKTPVRPRITRPPSTN*
Sbjct: 302 VGSQPIRVSPSKTPVRPRITRPPSTN* 328
>TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 315
Score = 357 bits (916), Expect = 5e-099
Identities = 175/206 (84%), Positives = 189/206 (91%)
Frame = -2
Query: 897 RRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLRF 718
R RL GR SKAQREDSIRRTVYVSDIDQSVTEEGLA LFS+CGQVVDCRICGDP+SVLRF
Sbjct: 110 RVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRF 169
Query: 717 AFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYC 538
AFVEF+DDQGA ALSLGGTM+GYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYC
Sbjct: 170 AFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYC 229
Query: 537 TNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMVI 358
TN+DK ++ D+ FF+SACGEVTRLRLLGDQ+HSTRIAFVEFA+A+SA ALNCSG+V+
Sbjct: 230 TNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVL 289
Query: 357 GSQPIRVSPSKTPVRPRITRPPSTN* 280
GSQPIRVSPSKTPVR RITR PS N*
Sbjct: 290 GSQPIRVSPSKTPVRSRITRSPSPN* 315
>TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 309
Score = 357 bits (916), Expect = 5e-099
Identities = 175/206 (84%), Positives = 189/206 (91%)
Frame = -2
Query: 897 RRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLRF 718
R RL GR SKAQREDSIRRTVYVSDIDQSVTEEGLA LFS+CGQVVDCRICGDP+SVLRF
Sbjct: 104 RVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRF 163
Query: 717 AFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYC 538
AFVEF+DDQGA ALSLGGTM+GYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYC
Sbjct: 164 AFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYC 223
Query: 537 TNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMVI 358
TN+DK ++ D+ FF+SACGEVTRLRLLGDQ+HSTRIAFVEFA+A+SA ALNCSG+V+
Sbjct: 224 TNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVL 283
Query: 357 GSQPIRVSPSKTPVRPRITRPPSTN* 280
GSQPIRVSPSKTPVR RITR PS N*
Sbjct: 284 GSQPIRVSPSKTPVRSRITRSPSPN* 309
>TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875174-11877188 REVERSE
Length = 359
Score = 320 bits (820), Expect = 7e-088
Identities = 156/203 (76%), Positives = 177/203 (87%)
Frame = -2
Query: 900 GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLR 721
G+RR+ R S AQRED IRRTVYVSD+DQ VTEE LA LF +CGQVVDCRICGDP+SVLR
Sbjct: 154 GKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLR 213
Query: 720 FAFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 541
FAF+EF D++GA AL+L GTMLG+YPV+VLPSKTAI PVNPTFLPR+EDEREMC+RTIY
Sbjct: 214 FAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIY 273
Query: 540 CTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMV 361
CTNIDKKV+Q+D++ FFES CGEV RLRLLGD HSTRIAFVEF +A+SA ALNCSG+V
Sbjct: 274 CTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVV 333
Query: 360 IGSQPIRVSPSKTPVRPRITRPP 292
+GS PIRVSPSKTPVRPR R P
Sbjct: 334 LGSLPIRVSPSKTPVRPRSPRHP 356
>TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CID12; RNA
binding | chr4:6557336-6559143 FORWARD
Length = 337
Score = 301 bits (769), Expect = 6e-082
Identities = 147/198 (74%), Positives = 168/198 (84%)
Frame = -2
Query: 900 GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLR 721
G+RR+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF GQVVDCRICGDP+SVLR
Sbjct: 131 GKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLR 190
Query: 720 FAFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 541
FAF+EF D+ GA AL+L GTMLG+YPV+V+PSKTAI PVNPTFLPR+EDEREMC+RTIY
Sbjct: 191 FAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIY 250
Query: 540 CTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMV 361
CTNIDKK++Q D++ FFES CGEV RLRLLGD H TRI FVEF +A+SA ALNCSG++
Sbjct: 251 CTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVL 310
Query: 360 IGSQPIRVSPSKTPVRPR 307
+GS PIRVSPSKTPVR R
Sbjct: 311 LGSLPIRVSPSKTPVRSR 328
>TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 300 bits (767), Expect = 1e-081
Identities = 143/201 (71%), Positives = 171/201 (85%), Gaps = 1/201 (0%)
Frame = -2
Query: 900 GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLR 721
G+RR+ R S AQ++D IRRTVYVSDIDQ VTEE LA +F NCGQVVDCR+CGDP+SVLR
Sbjct: 150 GKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLR 209
Query: 720 FAFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 541
FAF+EF +++GA ALS+ GT+LG+YP++VLPSKTAI PVNPTFLPRSEDEREMC RT+Y
Sbjct: 210 FAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVY 269
Query: 540 CTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMV 361
CTNIDK+++Q D++ FFE CGEV RLR LGD H TRIAFVEFA+A+SA AL+CSG+V
Sbjct: 270 CTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHCSGIV 328
Query: 360 IGSQPIRVSPSKTPVRPRITR 298
+G+ PIRVSPSKTPVRP R
Sbjct: 329 LGALPIRVSPSKTPVRPHFPR 349
Score = 65 bits (157), Expect = 5e-011
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = -2
Query: 564 EMCSRTIYCTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATR 385
++ RT+Y ++ID++V++ ++ F + CG+V R+ GD R AF+EF + A
Sbjct: 165 DVIRRTVYVSDIDQQVTEENLAGVFIN-CGQVVDCRVCGDPNSVLRFAFIEFTNEEGARA 223
Query: 384 ALNCSGMVIGSQPIRVSPSKTPVRP 310
AL+ SG V+G P++V PSKT + P
Sbjct: 224 ALSMSGTVLGFYPLKVLPSKTAIAP 248
>TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 300 bits (767), Expect = 1e-081
Identities = 143/201 (71%), Positives = 171/201 (85%), Gaps = 1/201 (0%)
Frame = -2
Query: 900 GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLR 721
G+RR+ R S AQ++D IRRTVYVSDIDQ VTEE LA +F NCGQVVDCR+CGDP+SVLR
Sbjct: 150 GKRRMNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLR 209
Query: 720 FAFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 541
FAF+EF +++GA ALS+ GT+LG+YP++VLPSKTAI PVNPTFLPRSEDEREMC RT+Y
Sbjct: 210 FAFIEFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVY 269
Query: 540 CTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMV 361
CTNIDK+++Q D++ FFE CGEV RLR LGD H TRIAFVEFA+A+SA AL+CSG+V
Sbjct: 270 CTNIDKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHCSGIV 328
Query: 360 IGSQPIRVSPSKTPVRPRITR 298
+G+ PIRVSPSKTPVRP R
Sbjct: 329 LGALPIRVSPSKTPVRPHFPR 349
Score = 65 bits (157), Expect = 5e-011
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = -2
Query: 564 EMCSRTIYCTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATR 385
++ RT+Y ++ID++V++ ++ F + CG+V R+ GD R AF+EF + A
Sbjct: 165 DVIRRTVYVSDIDQQVTEENLAGVFIN-CGQVVDCRVCGDPNSVLRFAFIEFTNEEGARA 223
Query: 384 ALNCSGMVIGSQPIRVSPSKTPVRP 310
AL+ SG V+G P++V PSKT + P
Sbjct: 224 ALSMSGTVLGFYPLKVLPSKTAIAP 248
>TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875028-11877188 REVERSE
Length = 407
Score = 297 bits (758), Expect = 1e-080
Identities = 144/189 (76%), Positives = 165/189 (87%)
Frame = -2
Query: 900 GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLR 721
G+RR+ R S AQRED IRRTVYVSD+DQ VTEE LA LF +CGQVVDCRICGDP+SVLR
Sbjct: 154 GKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLR 213
Query: 720 FAFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 541
FAF+EF D++GA AL+L GTMLG+YPV+VLPSKTAI PVNPTFLPR+EDEREMC+RTIY
Sbjct: 214 FAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIY 273
Query: 540 CTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMV 361
CTNIDKKV+Q+D++ FFES CGEV RLRLLGD HSTRIAFVEF +A+SA ALNCSG+V
Sbjct: 274 CTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVV 333
Query: 360 IGSQPIRVS 334
+GS PIR S
Sbjct: 334 LGSLPIRSS 342
Score = 67 bits (162), Expect = 1e-011
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 1/85 (1%)
Frame = -2
Query: 564 EMCSRTIYCTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATR 385
++ RT+Y +++D++V++ + F S CG+V R+ GD R AF+EF + A
Sbjct: 169 DVIRRTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMT 227
Query: 384 ALNCSGMVIGSQPIRVSPSKTPVRP 310
ALN SG ++G P++V PSKT + P
Sbjct: 228 ALNLSGTMLGFYPVKVLPSKTAIAP 252
>TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RNA binding |
chr4:6557336-6559019 FORWARD
Length = 327
Score = 282 bits (720), Expect = 3e-076
Identities = 137/187 (73%), Positives = 158/187 (84%)
Frame = -2
Query: 900 GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLR 721
G+RR+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF GQVVDCRICGDP+SVLR
Sbjct: 131 GKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLR 190
Query: 720 FAFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 541
FAF+EF D+ GA AL+L GTMLG+YPV+V+PSKTAI PVNPTFLPR+EDEREMC+RTIY
Sbjct: 191 FAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIY 250
Query: 540 CTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMV 361
CTNIDKK++Q D++ FFES CGEV RLRLLGD H TRI FVEF +A+SA ALNCSG++
Sbjct: 251 CTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVL 310
Query: 360 IGSQPIR 340
+GS PIR
Sbjct: 311 LGSLPIR 317
>TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interacting Domain
13); RNA binding / nucleic acid binding / nucleotide binding |
chr5:8345402-8347776 REVERSE
Length = 321
Score = 263 bits (671), Expect = 1e-070
Identities = 127/196 (64%), Positives = 154/196 (78%)
Frame = -2
Query: 900 GRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAALFSNCGQVVDCRICGDPHSVLR 721
GR +T + + Q ED I+RTVYVSDID VTEE LA+LF +CGQVVDCR+CGD S+LR
Sbjct: 118 GRPWITKKTNLVQNEDMIKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGDYKSILR 177
Query: 720 FAFVEFADDQGAHKALSLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 541
FAF+EF D +GA AL GTM G +P+RV SKTAI PVNP+FLP+S+DE E C +T+Y
Sbjct: 178 FAFIEFTDAEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNPSFLPQSKDELEKCGKTVY 237
Query: 540 CTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSATRALNCSGMV 361
CTNIDK+V++ ++ NFF++ CGEV LRLLGD H TRIAFVEF LA+SA ALNCSG+V
Sbjct: 238 CTNIDKEVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNCSGVV 297
Query: 360 IGSQPIRVSPSKTPVR 313
+G PIRVSPSKTPVR
Sbjct: 298 LGELPIRVSPSKTPVR 313
Score = 69 bits (167), Expect = 4e-012
Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Frame = -2
Query: 594 TFLPRSEDEREMCSRTIYCTNIDKKVSQADMRNFFESACGEVTRLRLLGDQLHSTRIAFV 415
T L ++ED M RT+Y ++ID +V++ + + F S CG+V R+ GD R AF+
Sbjct: 126 TNLVQNED---MIKRTVYVSDIDNQVTEEQLASLFLS-CGQVVDCRMCGDYKSILRFAFI 181
Query: 414 EFALADSATRALNCSGMVIGSQPIRVSPSKTPVRP 310
EF A+ A AL SG + GS PIRV SKT + P
Sbjct: 182 EFTDAEGARSALRKSGTMFGSHPIRVFMSKTAIAP 216
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,783,668,172
Number of Sequences: 33410
Number of Extensions: 2783668172
Number of Successful Extensions: 100691002
Number of sequences better than 0.0: 0
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