BLASTX 7.6.2
Query= UN04438 /QuerySize=802
(801 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G58640.1 | Symbols: | selenoprotein-related |... 387 4e-108
TAIR9_protein||AT5G58640.2 | Symbols: | selenoprotein-related |... 385 2e-107
TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PRO... 274 6e-074
>TAIR9_protein||AT5G58640.1 | Symbols: | selenoprotein-related |
chr5:23697996-23699505 FORWARD
Length = 229
Score = 387 bits (994), Expect = 4e-108
Identities = 187/216 (86%), Positives = 199/216 (92%), Gaps = 4/216 (1%)
Frame = +2
Query: 98 MDRSQLLLIGLPIFLFCSDLFNLFTPPPPKPPSHRPNHPPHIPHQQRPPVVVP---DFPS 268
MDR+QL+L+GLPIFLFCSDLFNLFTPPPPKP HRP+ PPHIPHQ RP ++P DFPS
Sbjct: 1 MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60
Query: 269 QKQASGLGGAVGYGNTVEINFCVSCSFKGTAVTMKKMLETAFPGLDVVLANYPPPPPKRL 448
QK SGLGGA+GYGNTVEINFCVSCS+KGTAVTMKKMLETAFPGLDV+LANYPPP PKRL
Sbjct: 61 QK-TSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRL 119
Query: 449 LAKVVPVAQMGVIGMIVAGDRVFPMIGIAHPPAWFNSLRANRFGSMASTWLIGNFLQSYL 628
LAKVVPV QMGVIGMIVAGDR+ PMIGI +PPAWF+SLRANRFGSMASTWLIGNFLQSYL
Sbjct: 120 LAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYL 179
Query: 629 QSSGAFEVLCNGELVFSKLKEGRFPGEIELRDLISK 736
QSSGAFEV CNGE VFSKLKEGRFPGEIELRDLISK
Sbjct: 180 QSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISK 215
>TAIR9_protein||AT5G58640.2 | Symbols: | selenoprotein-related |
chr5:23697996-23699505 FORWARD
Length = 228
Score = 385 bits (988), Expect = 2e-107
Identities = 186/216 (86%), Positives = 198/216 (91%), Gaps = 5/216 (2%)
Frame = +2
Query: 98 MDRSQLLLIGLPIFLFCSDLFNLFTPPPPKPPSHRPNHPPHIPHQQRPPVVVP---DFPS 268
MDR+QL+L+GLPIFLFCSDLFNLFTPPPPKP HRP+ PPHIPHQ RP ++P DFPS
Sbjct: 1 MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIPETLDFPS 60
Query: 269 QKQASGLGGAVGYGNTVEINFCVSCSFKGTAVTMKKMLETAFPGLDVVLANYPPPPPKRL 448
Q SGLGGA+GYGNTVEINFCVSCS+KGTAVTMKKMLETAFPGLDV+LANYPPP PKRL
Sbjct: 61 --QTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRL 118
Query: 449 LAKVVPVAQMGVIGMIVAGDRVFPMIGIAHPPAWFNSLRANRFGSMASTWLIGNFLQSYL 628
LAKVVPV QMGVIGMIVAGDR+ PMIGI +PPAWF+SLRANRFGSMASTWLIGNFLQSYL
Sbjct: 119 LAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYL 178
Query: 629 QSSGAFEVLCNGELVFSKLKEGRFPGEIELRDLISK 736
QSSGAFEV CNGE VFSKLKEGRFPGEIELRDLISK
Sbjct: 179 QSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISK 214
>TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PROTEIN
PRECURSOR); selenium binding | chr3:17428685-17429555 REVERSE
Length = 210
Score = 274 bits (699), Expect = 6e-074
Identities = 134/175 (76%), Positives = 151/175 (86%), Gaps = 6/175 (3%)
Frame = +2
Query: 212 PPHIPHQQRPPV-VVPDFPSQKQASGLGGAVGYGNTVEINFCVSCSFKGTAVTMKKMLET 388
PP HQ P + DFP+QK VGYGNTVEINFC+SCS+KGTAV+MKKMLE+
Sbjct: 28 PPKSQHQSPPSISETLDFPAQKST-----GVGYGNTVEINFCISCSYKGTAVSMKKMLES 82
Query: 389 AFPGLDVVLANYPPPPPKRLLAKVVPVAQMGVIGMIVAGDRVFPMIGIAHPPAWFNSLRA 568
FPGLDVVLANYP P PKR+LAKVVPVAQ+GVIG+I+ G+++FPMIGIA PPAW++SLRA
Sbjct: 83 VFPGLDVVLANYPAPAPKRILAKVVPVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRA 142
Query: 569 NRFGSMASTWLIGNFLQSYLQSSGAFEVLCNGELVFSKLKEGRFPGEIELRDLIS 733
NRFGSMASTWL+GNFLQS+LQSSGAFEV CNGELVFSKLKEGRFPGEIELRDLIS
Sbjct: 143 NRFGSMASTWLLGNFLQSFLQSSGAFEVSCNGELVFSKLKEGRFPGEIELRDLIS 197
Score = 62 bits (148), Expect = 5e-010
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 98 MDRSQLLLIGLPIFLFCSDLFNLFTPPPPKPPSHRP 205
MD++QL+L+GLPIFL CSDLFNLFTPPPPK P
Sbjct: 1 MDKTQLILLGLPIFLLCSDLFNLFTPPPPKSQHQSP 36
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,914,471,872
Number of Sequences: 33410
Number of Extensions: 2914471872
Number of Successful Extensions: 105817115
Number of sequences better than 0.0: 0
|
