BLASTX 7.6.2
Query= UN04455 /QuerySize=785
(784 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15232274|ref|NP_189421.1| 50S ribosomal protein L12-1 [Arabid... 301 1e-079
gi|297815042|ref|XP_002875404.1| ribosomal protein L12-A [Arabid... 291 1e-076
gi|468773|emb|CAA48183.1| ribosomal protein L12 [Arabidopsis tha... 285 6e-075
gi|15232276|ref|NP_189423.1| 50S ribosomal protein L12-3 [Arabid... 285 8e-075
gi|21592776|gb|AAM64725.1| 50S ribosomal protein L12-C [Arabidop... 283 2e-074
gi|297815046|ref|XP_002875406.1| ribosomal protein L12-C [Arabid... 275 5e-072
gi|297815044|ref|XP_002875405.1| ribosomal protein L12-B [Arabid... 252 7e-065
gi|15232275|ref|NP_189422.1| 50S ribosomal protein L12-2 [Arabid... 245 9e-063
gi|468772|emb|CAA48182.1| ribosomal protein L12 [Arabidopsis tha... 243 3e-062
gi|225452430|ref|XP_002277258.1| PREDICTED: hypothetical protein... 223 3e-056
gi|133085|sp|P02398.2|RK12_SPIOL RecName: Full=50S ribosomal pro... 217 2e-054
gi|224055553|ref|XP_002298536.1| predicted protein [Populus tric... 215 8e-054
gi|548746|sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal pro... 215 1e-053
gi|20020|emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tab... 211 1e-052
gi|133088|sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal pro... 211 1e-052
gi|242053887|ref|XP_002456089.1| hypothetical protein SORBIDRAFT... 175 7e-042
gi|115465515|ref|NP_001056357.1| Os05g0568300 [Oryza sativa Japo... 163 5e-038
gi|125553362|gb|EAY99071.1| hypothetical protein OsI_21028 [Oryz... 161 1e-037
gi|168025006|ref|XP_001765026.1| predicted protein [Physcomitrel... 151 1e-034
gi|168049337|ref|XP_001777120.1| predicted protein [Physcomitrel... 138 1e-030
>gi|15232274|ref|NP_189421.1| 50S ribosomal protein L12-1 [Arabidopsis
thaliana]
Length = 191
Score = 301 bits (769), Expect = 1e-079
Identities = 166/192 (86%), Positives = 176/192 (91%), Gaps = 2/192 (1%)
Frame = -2
Query: 741 ATTTLSTASSILSSSSPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISAV 562
A+TTLS A++I SSS PTL S + F SR TT+EFPSRF SS+T++HRATHLRPI+AV
Sbjct: 2 ASTTLSIATTIRSSSYPTLASINHFPSRTTTIEFPSRF-GGGSSSTLTHRATHLRPIAAV 60
Query: 561 EAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVE 382
EAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAP D GGAAA VE
Sbjct: 61 EAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPAD-GGAAAVVE 119
Query: 381 EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKK 202
EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+TKDEAEEAKK
Sbjct: 120 EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKK 179
Query: 201 QLEEAGAKVSIA 166
LEEAGAKVSIA
Sbjct: 180 TLEEAGAKVSIA 191
>gi|297815042|ref|XP_002875404.1| ribosomal protein L12-A [Arabidopsis lyrata
subsp. lyrata]
Length = 184
Score = 291 bits (743), Expect = 1e-076
Identities = 160/185 (86%), Positives = 171/185 (92%), Gaps = 2/185 (1%)
Frame = -2
Query: 741 ATTTLSTASSILSSSSPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISAV 562
A+TTLS A++I SSS PTL S++ F SR TT+EFPSRF +SS+T++HRATHLRPI+AV
Sbjct: 2 ASTTLSIATTIRSSSYPTLASTNHFPSRTTTIEFPSRF-GGASSSTLTHRATHLRPIAAV 60
Query: 561 EAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVE 382
EAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAP D GGAAA VE
Sbjct: 61 EAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPAD-GGAAAVVE 119
Query: 381 EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKK 202
EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKK
Sbjct: 120 EQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKK 179
Query: 201 QLEEA 187
LEEA
Sbjct: 180 TLEEA 184
>gi|468773|emb|CAA48183.1| ribosomal protein L12 [Arabidopsis thaliana]
Length = 187
Score = 285 bits (728), Expect = 6e-075
Identities = 160/188 (85%), Positives = 167/188 (88%), Gaps = 6/188 (3%)
Frame = -2
Query: 729 LSTASSILSSSSPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISAVEAPE 550
LS A++I SSS T S+H FLS+PT +EFP R SSS SHRA +LRPISAVEAPE
Sbjct: 6 LSIATTIRSSSPLTCASTHHFLSKPTAIEFPFRLSSSS-----SHRAINLRPISAVEAPE 60
Query: 549 KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTE 370
KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAP D GGAAA VEEQTE
Sbjct: 61 KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPAD-GGAAAVVEEQTE 119
Query: 369 FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEE 190
FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+TKDEAEEAKK LEE
Sbjct: 120 FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKTLEE 179
Query: 189 AGAKVSIA 166
AGAKVSIA
Sbjct: 180 AGAKVSIA 187
>gi|15232276|ref|NP_189423.1| 50S ribosomal protein L12-3 [Arabidopsis
thaliana]
Length = 187
Score = 285 bits (727), Expect = 8e-075
Identities = 160/188 (85%), Positives = 167/188 (88%), Gaps = 6/188 (3%)
Frame = -2
Query: 729 LSTASSILSSSSPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISAVEAPE 550
LS A++I SSS T S+H FLS+PT +EFP R SSS SHRA +LRPISAVEAPE
Sbjct: 6 LSIATTIRSSSPLTSASTHHFLSKPTAIEFPFRLSSSS-----SHRAINLRPISAVEAPE 60
Query: 549 KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTE 370
KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAP D GGAAA VEEQTE
Sbjct: 61 KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPAD-GGAAAVVEEQTE 119
Query: 369 FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEE 190
FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+TKDEAEEAKK LEE
Sbjct: 120 FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKTLEE 179
Query: 189 AGAKVSIA 166
AGAKVSIA
Sbjct: 180 AGAKVSIA 187
>gi|21592776|gb|AAM64725.1| 50S ribosomal protein L12-C [Arabidopsis thaliana]
Length = 187
Score = 283 bits (723), Expect = 2e-074
Identities = 159/188 (84%), Positives = 167/188 (88%), Gaps = 6/188 (3%)
Frame = -2
Query: 729 LSTASSILSSSSPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISAVEAPE 550
LS A++I SSS T S+H FLS+PT +EFP R SSS SHRA +LRPISAVEAPE
Sbjct: 6 LSIATTIRSSSPLTSASTHHFLSKPTAIEFPFRLSSSS-----SHRAINLRPISAVEAPE 60
Query: 549 KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTE 370
KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAP D GGAAA VEEQT+
Sbjct: 61 KIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPAD-GGAAAVVEEQTK 119
Query: 369 FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEE 190
FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+TKDEAEEAKK LEE
Sbjct: 120 FDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEAEEAKKTLEE 179
Query: 189 AGAKVSIA 166
AGAKVSIA
Sbjct: 180 AGAKVSIA 187
>gi|297815046|ref|XP_002875406.1| ribosomal protein L12-C [Arabidopsis lyrata
subsp. lyrata]
Length = 186
Score = 275 bits (703), Expect = 5e-072
Identities = 155/185 (83%), Positives = 163/185 (88%), Gaps = 7/185 (3%)
Frame = -2
Query: 720 ASSILSSSSPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISAVEAPEKIE 541
A++I SSS T ++H F S+PT +EFP R SS SHRA +LRPI+AVEAPEKIE
Sbjct: 9 ATTIRSSSPLTSATTHHFPSKPTAIEFPFRLSSS------SHRAINLRPIAAVEAPEKIE 62
Query: 540 KIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDV 361
KIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAP D GGAAA VEEQTEFDV
Sbjct: 63 KIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPSD-GGAAAVVEEQTEFDV 121
Query: 360 VINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEEAGA 181
VINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKK LEEAGA
Sbjct: 122 VINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKTLEEAGA 181
Query: 180 KVSIA 166
KVSIA
Sbjct: 182 KVSIA 186
>gi|297815044|ref|XP_002875405.1| ribosomal protein L12-B [Arabidopsis lyrata
subsp. lyrata]
Length = 190
Score = 252 bits (641), Expect = 7e-065
Identities = 139/189 (73%), Positives = 156/189 (82%), Gaps = 3/189 (1%)
Frame = -2
Query: 735 TTLSTASSILSSSSPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISAVEA 556
TTLS A++I SS L S+H F SRP +EFP F SSSS+T+SHRA +L PISAV+A
Sbjct: 4 TTLSIATTIRSSG---LASTHHFPSRPVAIEFPFSFGVSSSSSTLSHRAIYLHPISAVKA 60
Query: 555 PEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQ 376
P+KI+KIGSEISSLTLEEARILVDY+QDKFGVS L APAAAA P D GGAAAAVE Q
Sbjct: 61 PKKIKKIGSEISSLTLEEARILVDYVQDKFGVSILFSAPAAAAFPPPPDNGGAAAAVERQ 120
Query: 375 TEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQL 196
T+FDVVIN+V +RIAVIKA+RA+TSL L E+KEL EG PKKFKEGVTKDEAEEAKKQL
Sbjct: 121 TKFDVVINDVLIGNRIAVIKAIRAMTSLCLNESKELTEGFPKKFKEGVTKDEAEEAKKQL 180
Query: 195 EEAGAKVSI 169
EEAGAKVSI
Sbjct: 181 EEAGAKVSI 189
>gi|15232275|ref|NP_189422.1| 50S ribosomal protein L12-2 [Arabidopsis
thaliana]
Length = 193
Score = 245 bits (623), Expect = 9e-063
Identities = 136/192 (70%), Positives = 157/192 (81%), Gaps = 2/192 (1%)
Frame = -2
Query: 741 ATTTLSTASSILSSS-SPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISA 565
A TTLS A++I SSS S L S+H F SRP ++EFP F SSS+T+SHRA +L PISA
Sbjct: 2 AATTLSIATTIRSSSFSSGLASAHHFPSRPLSIEFPFSF-GVSSSSTLSHRAIYLHPISA 60
Query: 564 VEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAV 385
V+ P+KI+KIGSEISSLTLEE+RILVDY+QDKFGVS L APAAAA+ P D GGA A+V
Sbjct: 61 VKTPKKIKKIGSEISSLTLEESRILVDYVQDKFGVSILFSAPAAAALPPPLDNGGATASV 120
Query: 384 EEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAK 205
E QT FDVVIN+VP +RIAVI A+RA+TSL+L E+KELIEG PKKFKEGVTKDEAEE K
Sbjct: 121 ERQTTFDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFPKKFKEGVTKDEAEEDK 180
Query: 204 KQLEEAGAKVSI 169
QLEEAGAKVSI
Sbjct: 181 TQLEEAGAKVSI 192
>gi|468772|emb|CAA48182.1| ribosomal protein L12 [Arabidopsis thaliana]
Length = 193
Score = 243 bits (618), Expect = 3e-062
Identities = 135/192 (70%), Positives = 156/192 (81%), Gaps = 2/192 (1%)
Frame = -2
Query: 741 ATTTLSTASSILSSS-SPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISA 565
A TTLS A++I SSS S L S+H F SRP ++EFP F SSS+T+SHRA +L PISA
Sbjct: 2 AATTLSIATTIRSSSFSSGLASAHHFPSRPLSIEFPFSF-GVSSSSTLSHRAIYLHPISA 60
Query: 564 VEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAV 385
V+ P+KI+KIGSEISSLTLEE+RILVDY+QDKFGVS L APAAAA+ P D GGA A+V
Sbjct: 61 VKTPKKIKKIGSEISSLTLEESRILVDYVQDKFGVSILFSAPAAAALPPPLDNGGATASV 120
Query: 384 EEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAK 205
E QT FDVVIN+VP +RIAVI A+RA+TSL+L E+KELIEG PKKFKEGVTKDEAEE K
Sbjct: 121 ERQTTFDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFPKKFKEGVTKDEAEEDK 180
Query: 204 KQLEEAGAKVSI 169
QLEE GAKVSI
Sbjct: 181 TQLEEPGAKVSI 192
>gi|225452430|ref|XP_002277258.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 184
Score = 223 bits (567), Expect = 3e-056
Identities = 127/182 (69%), Positives = 146/182 (80%), Gaps = 7/182 (3%)
Frame = -2
Query: 714 SILSSSSPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISAVEAPEKIEKI 535
++ S S PTL+SS S TL+FP R + I HRAT +RPISAV APEKIEKI
Sbjct: 9 TLRSPSCPTLSSSFPTHSFKQTLDFPFR------NPKIIHRATFVRPISAVAAPEKIEKI 62
Query: 534 GSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDVVI 355
G+E+S+LTLEEARILVD+LQDK GVS + APAA AV APG A A VEE+TEFDV+I
Sbjct: 63 GTELSNLTLEEARILVDWLQDKLGVSAAAFAPAAVAV-APGAVADAPAVVEEKTEFDVMI 121
Query: 354 NEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEEAGAKV 175
+VPS++RIA IKAVRALTSLALKEAKELIEGLPKKFKEGV+K+EAEEAKKQLEEAGAKV
Sbjct: 122 EDVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEEAKKQLEEAGAKV 181
Query: 174 SI 169
+I
Sbjct: 182 AI 183
>gi|133085|sp|P02398.2|RK12_SPIOL RecName: Full=50S ribosomal protein L12,
chloroplastic; AltName: Full=CL12; Flags: Precursor
Length = 189
Score = 217 bits (551), Expect = 2e-054
Identities = 122/190 (64%), Positives = 151/190 (79%), Gaps = 5/190 (2%)
Frame = -2
Query: 729 LSTASSILSSSSPTLTS---SHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPISAVE 559
++ +++ + + P+LTS S F P L+FP R ++ S + S R T LRPI+AVE
Sbjct: 1 MAATTTMATLNLPSLTSHPNSSTFPKHPQPLQFPFRTTTNPISLS-STRTTRLRPIAAVE 59
Query: 558 APEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEE 379
APEKIE++G+++S LTLEEAR+LVD+LQDK GVS S AP AAAVAAPG AA AVEE
Sbjct: 60 APEKIEQLGTQLSGLTLEEARVLVDWLQDKLGVSAASFAP-AAAVAAPGAPADAAPAVEE 118
Query: 378 QTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQ 199
+TEFDV I+EVPS++RI+VIKAVRALTSL LKEAKELIEGLPKK KEGV+KD+AE+AKKQ
Sbjct: 119 KTEFDVSIDEVPSNARISVIKAVRALTSLGLKEAKELIEGLPKKLKEGVSKDDAEDAKKQ 178
Query: 198 LEEAGAKVSI 169
LE+AGAKVSI
Sbjct: 179 LEDAGAKVSI 188
>gi|224055553|ref|XP_002298536.1| predicted protein [Populus trichocarpa]
Length = 187
Score = 215 bits (546), Expect = 8e-054
Identities = 126/189 (66%), Positives = 145/189 (76%), Gaps = 13/189 (6%)
Frame = -2
Query: 726 STASSILSSSSPTLTSSHAFLSRPTT--LEFPSRFLSSSSSTTISHRATHLRPISAVEAP 553
ST LS SP+ +++H+ PT L FP R L +S R++H+RP++AV AP
Sbjct: 8 STTIPTLSLHSPSSSTTHS----PTKHFLLFPRRQL------PLSFRSSHVRPVAAVAAP 57
Query: 552 EKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGA-AAAVEEQ 376
EKIEK+G+EISSLTLEEAR LVDYLQDK GVS + APAAA APG A AA VEE+
Sbjct: 58 EKIEKLGAEISSLTLEEARTLVDYLQDKLGVSAAAFAPAAAVGVAPGAAADAGAAVVEEK 117
Query: 375 TEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQL 196
TEFDVVI EVPS+ RIAVIK+VRALTSLALKEAKELIEGLPKKFKEGV+KDEAEEAKKQL
Sbjct: 118 TEFDVVIEEVPSNVRIAVIKSVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEEAKKQL 177
Query: 195 EEAGAKVSI 169
E AGAK S+
Sbjct: 178 EAAGAKCSV 186
>gi|548746|sp|P36688.1|RK12_NICSY RecName: Full=50S ribosomal protein L12,
chloroplastic; AltName: Full=CL12; Flags: Precursor
Length = 186
Score = 215 bits (545), Expect = 1e-053
Identities = 123/184 (66%), Positives = 145/184 (78%), Gaps = 7/184 (3%)
Frame = -2
Query: 714 SILSSSSPTLTSSHAFLSRP-TTLEFPSRFLSSSSSTTISHRATHLRPISAVEAPEKIEK 538
++ S S T TS+HA + P TLEFP R + + RAT LRP++AVEAPEK+ +
Sbjct: 9 TLRSPSPSTATSTHASIPFPKKTLEFPIR-----TPKLQNRRATFLRPLAAVEAPEKVVQ 63
Query: 537 IGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDVV 358
+G EIS+LTL +A+ LV+YLQDK GV+ S AP AA VAAPG A A VEE+TEFDVV
Sbjct: 64 LGDEISNLTLADAQKLVEYLQDKLGVTAASFAP-AAVVAAPGAAAEAPAVVEEKTEFDVV 122
Query: 357 INEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEEAGAK 178
I+EVPS++RIA IKAVRALTSLALKEAKELIEGLPKKFKEGV+KDEAE+AKKQLEEAGAK
Sbjct: 123 IDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDAKKQLEEAGAK 182
Query: 177 VSIA 166
VSIA
Sbjct: 183 VSIA 186
>gi|20020|emb|CAA44226.1| ribosomal protein L12-1a [Nicotiana tabacum]
Length = 191
Score = 211 bits (535), Expect = 1e-052
Identities = 122/185 (65%), Positives = 145/185 (78%), Gaps = 9/185 (4%)
Frame = -2
Query: 714 SILSSSSPTLTSSHAFLSRP-TTLEFPSRFLSSSSSTTISH-RATHLRPISAVEAPEKIE 541
++ S S T +S+HA + P LEFP R + + H RAT LRP++AVEAPEK+
Sbjct: 9 TLRSPSPSTASSTHASIPFPKKALEFPIR------TPKLHHRRATFLRPLAAVEAPEKVV 62
Query: 540 KIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDV 361
++G EIS+LTL +A+ LV+YLQDK GV+ S APAA A AAPG A A VEE+TEFDV
Sbjct: 63 QLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVA-AAPGAAAEAPAVVEEKTEFDV 121
Query: 360 VINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEEAGA 181
VI+EVPS++RIA IKAVRALTSLALKEAKELIEGLPKKFKEGV+KDEAE+AKKQLEEAGA
Sbjct: 122 VIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDAKKQLEEAGA 181
Query: 180 KVSIA 166
KVSIA
Sbjct: 182 KVSIA 186
>gi|133088|sp|P24929.1|RK12_TOBAC RecName: Full=50S ribosomal protein L12,
chloroplastic; AltName: Full=CL12; Flags: Precursor
Length = 186
Score = 211 bits (535), Expect = 1e-052
Identities = 122/185 (65%), Positives = 145/185 (78%), Gaps = 9/185 (4%)
Frame = -2
Query: 714 SILSSSSPTLTSSHAFLSRP-TTLEFPSRFLSSSSSTTISH-RATHLRPISAVEAPEKIE 541
++ S S T +S+HA + P LEFP R + + H RAT LRP++AVEAPEK+
Sbjct: 9 TLRSPSPSTASSTHASIPFPKKALEFPIR------TPKLHHRRATFLRPLAAVEAPEKVV 62
Query: 540 KIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDV 361
++G EIS+LTL +A+ LV+YLQDK GV+ S APAA A AAPG A A VEE+TEFDV
Sbjct: 63 QLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVA-AAPGAAAEAPAVVEEKTEFDV 121
Query: 360 VINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEEAGA 181
VI+EVPS++RIA IKAVRALTSLALKEAKELIEGLPKKFKEGV+KDEAE+AKKQLEEAGA
Sbjct: 122 VIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDAKKQLEEAGA 181
Query: 180 KVSIA 166
KVSIA
Sbjct: 182 KVSIA 186
>gi|242053887|ref|XP_002456089.1| hypothetical protein SORBIDRAFT_03g030270
[Sorghum bicolor]
Length = 181
Score = 175 bits (443), Expect = 7e-042
Identities = 103/181 (56%), Positives = 126/181 (69%), Gaps = 6/181 (3%)
Frame = -2
Query: 699 SSPTLTSSHAFLSRPTTLEFPSRFLSSSSSTTISHRATHLRPI----SAVEAPEKIEKIG 532
+S TL+S+ LSRP+T P+ L SS + H R + +A E+P KI ++G
Sbjct: 2 ASTTLSSAFTLLSRPSTSPSPTASL-PRSSLAVPHCRRGRRAVAAACTATESP-KILELG 59
Query: 531 SEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEFDVVIN 352
I+ LTLEEAR LVD+LQ++ GV+ + APAA A G G A E+TEFDVVI
Sbjct: 60 DAIAGLTLEEARSLVDHLQERLGVTAAAFAPAAVVAAPAGAGAAEEEAPVEKTEFDVVIE 119
Query: 351 EVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLEEAGAKVS 172
EVPSS+RIA IK VRALTSLALKEAK+LIEGLPKK KE V+KDEAE+AKKQLEE GAK+S
Sbjct: 120 EVPSSARIATIKVVRALTSLALKEAKDLIEGLPKKLKEAVSKDEAEDAKKQLEEVGAKIS 179
Query: 171 I 169
I
Sbjct: 180 I 180
>gi|115465515|ref|NP_001056357.1| Os05g0568300 [Oryza sativa Japonica Group]
Length = 179
Score = 163 bits (410), Expect = 5e-038
Identities = 88/135 (65%), Positives = 103/135 (76%)
Frame = -2
Query: 570 SAVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAA 391
S + K+ ++G I+ LTLEEAR LVD+LQ++ GVS + APAA A GGG
Sbjct: 45 STAASSPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVAAPGAAGGGEDG 104
Query: 390 AVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEE 211
A E+TEFDVVI EVPSS+RIA IK VRALT+LALKEAK+LIEGLPKK KE V+K+EAEE
Sbjct: 105 APAEKTEFDVVIEEVPSSARIATIKVVRALTNLALKEAKDLIEGLPKKAKEAVSKEEAEE 164
Query: 210 AKKQLEEAGAKVSIA 166
AKKQLEE GAKVSIA
Sbjct: 165 AKKQLEEVGAKVSIA 179
>gi|125553362|gb|EAY99071.1| hypothetical protein OsI_21028 [Oryza sativa Indica
Group]
Length = 179
Score = 161 bits (406), Expect = 1e-037
Identities = 87/135 (64%), Positives = 102/135 (75%)
Frame = -2
Query: 570 SAVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAA 391
S + K+ ++G I+ LTLEEAR LVD+LQ++ GVS + APAA A GGG
Sbjct: 45 STAASSPKVLELGDAIAGLTLEEARGLVDHLQERLGVSAAAFAPAAVVAAPGAAGGGEDG 104
Query: 390 AVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEE 211
A E+TEFDVVI EVPSS+RIA IK VRALT+L LKEAK+LIEGLPKK KE V+K+EAEE
Sbjct: 105 APAEKTEFDVVIEEVPSSARIATIKVVRALTNLVLKEAKDLIEGLPKKAKEAVSKEEAEE 164
Query: 210 AKKQLEEAGAKVSIA 166
AKKQLEE GAKVSIA
Sbjct: 165 AKKQLEEVGAKVSIA 179
>gi|168025006|ref|XP_001765026.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 132
Score = 151 bits (381), Expect = 1e-034
Identities = 78/130 (60%), Positives = 102/130 (78%)
Frame = -2
Query: 558 APEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEE 379
A ++E++ ++ +TL +A+I D LQ+ G++ +S AP AAA AA G G AAAAVEE
Sbjct: 2 ATAELEELLEKVKGMTLADAKIFTDRLQEDLGITAMSFAPGAAAPAAGGGGDQAAAAVEE 61
Query: 378 QTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQ 199
+TEF++V+ EVPSS+RIAVIKAVR LTSL LKEAK++IEGLPK KEG++K++AEEAKK
Sbjct: 62 KTEFNLVMEEVPSSARIAVIKAVRTLTSLGLKEAKDMIEGLPKNVKEGISKEDAEEAKKA 121
Query: 198 LEEAGAKVSI 169
LE AGAK SI
Sbjct: 122 LEAAGAKCSI 131
>gi|168049337|ref|XP_001777120.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 136
Score = 138 bits (346), Expect = 1e-030
Identities = 70/118 (59%), Positives = 94/118 (79%)
Frame = -2
Query: 546 IEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPGDGGGAAAAVEEQTEF 367
+E++ ++ ++TL +A+ D LQ+ G++ +S AP+ AA AA G G AAAAVEE+TEF
Sbjct: 19 LEEMLEKVKNMTLADAKSFTDRLQEDLGITAMSFAPSGAAPAAAGAGAEAAAAVEEKTEF 78
Query: 366 DVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVTKDEAEEAKKQLE 193
++V+ EVPSS+RIAVIKAVR LTSL LKEAK++IEGLPK KEGV+K++AEEAKK LE
Sbjct: 79 NLVMEEVPSSARIAVIKAVRTLTSLGLKEAKDMIEGLPKNVKEGVSKEDAEEAKKALE 136
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 504,165,496,337
Number of Sequences: 15229318
Number of Extensions: 504165496337
Number of Successful Extensions: 137442181
Number of sequences better than 0.0: 0
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