BLASTX 7.6.2
Query= UN04471 /QuerySize=972
(971 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|A4SML8|RLMI_AERS4 Ribosomal RNA large subunit methyltransfera... 166 3e-040
sp|Q12JE5|RLMI_SHEDO Ribosomal RNA large subunit methyltransfera... 165 5e-040
sp|C4L7I7|RLMI_TOLAT Ribosomal RNA large subunit methyltransfera... 164 8e-040
sp|A0KKF0|RLMI_AERHH Ribosomal RNA large subunit methyltransfera... 163 2e-039
sp|Q07VV2|RLMI_SHEFN Ribosomal RNA large subunit methyltransfera... 163 2e-039
sp|Q6LQ36|RLMI_PHOPR Ribosomal RNA large subunit methyltransfera... 161 1e-038
sp|A8GCM8|RLMI_SERP5 Ribosomal RNA large subunit methyltransfera... 160 1e-038
sp|A1S9W1|RLMI_SHEAM Ribosomal RNA large subunit methyltransfera... 160 1e-038
sp|A7ME44|RLMI_ENTS8 Ribosomal RNA large subunit methyltransfera... 158 1e-037
sp|Q0HLL4|RLMI_SHESM Ribosomal RNA large subunit methyltransfera... 158 1e-037
sp|Q0HXZ5|RLMI_SHESR Ribosomal RNA large subunit methyltransfera... 158 1e-037
sp|Q8EHR8|RLMI_SHEON Ribosomal RNA large subunit methyltransfera... 157 1e-037
sp|A0KTU3|RLMI_SHESA Ribosomal RNA large subunit methyltransfera... 157 2e-037
sp|B2VDG5|RLMI_ERWT9 Ribosomal RNA large subunit methyltransfera... 156 2e-037
sp|Q8Z7R6|RLMI_SALTI Ribosomal RNA large subunit methyltransfera... 156 2e-037
sp|B5XY38|RLMI_KLEP3 Ribosomal RNA large subunit methyltransfera... 154 1e-036
sp|A6T766|RLMI_KLEP7 Ribosomal RNA large subunit methyltransfera... 153 2e-036
sp|Q1CA17|RLMI_YERPA Ribosomal RNA large subunit methyltransfera... 147 1e-034
sp|B2JYU4|RLMI_YERPB Ribosomal RNA large subunit methyltransfera... 147 1e-034
sp|Q7CHM1|RLMI_YERPE Ribosomal RNA large subunit methyltransfera... 147 1e-034
>sp|A4SML8|RLMI_AERS4 Ribosomal RNA large subunit methyltransferase I
OS=Aeromonas salmonicida (strain A449) GN=rlmI PE=3 SV=1
Length = 396
Score = 166 bits (418), Expect = 3e-040
Identities = 86/215 (40%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Frame = +1
Query: 229 ERSMVVENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAAR 405
E ++ ENG+ + + G KTGFY DQR+NR +S ++ KRVL+ Y+GGF + A +
Sbjct: 181 EPVVIEENGVKILVDIRNGHKTGFYLDQRDNRQAVSKYTSAKRVLNCFSYTGGFGIYALK 240
Query: 406 GGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIVILD 585
GGA V+ +D S AL++AR+N LN +D F + D + ++ + E +D+++LD
Sbjct: 241 GGAKEVVNVDLSQTALDMARQNAELNGLDISNTQFIRHDVFKLLREYREKGEKFDVIVLD 300
Query: 586 PPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSAAAM 765
PPK A K L A Y+++N LA +L + GG+L+T SCSG M QS F I+ AA
Sbjct: 301 PPKFAESKAQLLGACRGYKDINMLAFQLLAPGGVLLTYSCSGLMEQS-LFQKIVADAALD 359
Query: 766 AGRKITVVREAGAASDHPLDPSYPQGHYLSNILLR 870
AGR ++ ASDHP+ +YP+G YL +++R
Sbjct: 360 AGRDAQILELLSQASDHPIGTAYPEGFYLKGLVVR 394
>sp|Q12JE5|RLMI_SHEDO Ribosomal RNA large subunit methyltransferase I
OS=Shewanella denitrificans (strain OS217 / ATCC BAA-1090 / DSM 15013)
GN=rlmI PE=3 SV=2
Length = 397
Score = 165 bits (417), Expect = 5e-040
Identities = 86/219 (39%), Positives = 135/219 (61%), Gaps = 3/219 (1%)
Frame = +1
Query: 223 LPERSMVV-ENGITYAIS-LEGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALN 396
LP +++ ENGI A+ ++G KTGFY DQR+NR + GK VL+ CY+G F L
Sbjct: 179 LPAMPIIIEENGIKIAVDVVKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLY 238
Query: 397 AARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIV 576
AA+ GA S+ +D S AL+ AR+N+ +N +D V + + D + ++ +T+D++
Sbjct: 239 AAKAGAASIENVDVSALALQTARDNMAINGLDDSHVNYHEADVFKLLRQYRDEGKTFDVI 298
Query: 577 ILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSA 756
+LDPPK A K L+ A Y+++N +AM+L + GG+L+T SCSG M +S F ++ A
Sbjct: 299 VLDPPKFADNKSQLNGACRGYKDINMIAMQLLNPGGILLTFSCSGLM-ESDLFQKVVADA 357
Query: 757 AAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
A A R++ V ASDHP+ ++P+G+YL ++ RV
Sbjct: 358 ALDAKREVQFVERMHQASDHPISSAFPEGYYLKGLVARV 396
>sp|C4L7I7|RLMI_TOLAT Ribosomal RNA large subunit methyltransferase I
OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=rlmI PE=3 SV=1
Length = 397
Score = 164 bits (415), Expect = 8e-040
Identities = 89/219 (40%), Positives = 133/219 (60%), Gaps = 4/219 (1%)
Frame = +1
Query: 223 LPERSMVVE--NGITYAISLE-GQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFAL 393
+P +++E NGI ++ ++ G KTGFY DQR+NR + +RVL+ CY+GGF +
Sbjct: 178 VPPDEVIIEENNGIKISVDIKGGHKTGFYLDQRDNRAIAGRYAKDRRVLNCFCYTGGFGV 237
Query: 394 NAARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDI 573
A +GGA V+ +D S ALELA+ N LN +D K F KQD + ++ R E +D+
Sbjct: 238 YALQGGAKEVINVDVSESALELAKHNATLNKLDLTKARFEKQDVFKLLREYRERGEKFDM 297
Query: 574 VILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQS 753
++LDPPK A K L A Y+++N LA +L + G+L+T SCSG MT S F I+
Sbjct: 298 IVLDPPKFAENKAQLIGACRGYKDINLLAFQLLNPEGILLTFSCSGLMT-SELFQKIVAD 356
Query: 754 AAAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLR 870
AA AGR+ ++ A+DHP+ YP+G+YL +++R
Sbjct: 357 AALDAGREAQILERMTQAADHPIATPYPEGYYLKGLVVR 395
>sp|A0KKF0|RLMI_AERHH Ribosomal RNA large subunit methyltransferase I
OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB
9240) GN=rlmI PE=3 SV=2
Length = 397
Score = 163 bits (412), Expect = 2e-039
Identities = 86/218 (39%), Positives = 130/218 (59%), Gaps = 4/218 (1%)
Frame = +1
Query: 226 PERSMVVE--NGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALN 396
P +V+E G+ + + G KTGFY DQR+NR + + GKRVL+ CY+GGF +
Sbjct: 179 PTEPVVIEENGGVKILVDIRNGHKTGFYLDQRDNRQAAAKYTEGKRVLNCFCYTGGFGVY 238
Query: 397 AARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIV 576
A +GGA V+ +D S AL++AR+N LN +D F + D + ++ + + +D++
Sbjct: 239 ALKGGAKEVVNVDLSQNALDIARQNAELNGLDTSNTQFVRHDVFKLLREYREKGDKFDVI 298
Query: 577 ILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSA 756
+LDPPK A K L A Y+++N LA +L + GG+L+T SCSG M QS F I+ A
Sbjct: 299 VLDPPKFAESKAQLLGACRGYKDINMLAFQLLAPGGVLLTYSCSGLMEQS-LFQKIVADA 357
Query: 757 AAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLR 870
A AGR ++ ASDHP+ +YP+G YL +++R
Sbjct: 358 ALDAGRDAQILELLSQASDHPIGTAYPEGFYLKGLVVR 395
>sp|Q07VV2|RLMI_SHEFN Ribosomal RNA large subunit methyltransferase I
OS=Shewanella frigidimarina (strain NCIMB 400) GN=rlmI PE=3 SV=1
Length = 397
Score = 163 bits (412), Expect = 2e-039
Identities = 85/219 (38%), Positives = 135/219 (61%), Gaps = 3/219 (1%)
Frame = +1
Query: 223 LPERSMVV-ENGITYAIS-LEGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALN 396
LP +++ ENGI A+ ++G KTGFY DQR+NR + GK VL+ CY+G F L
Sbjct: 179 LPAMPVIIEENGIKIAVDVVKGHKTGFYLDQRDNRAMAARFVKGKSVLNCFCYTGTFGLY 238
Query: 397 AARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIV 576
AA+ GA S+ +D S AL+ AR+N+ +N+++ V + + D + ++ +T+D++
Sbjct: 239 AAKAGAASIENVDVSTLALQTARDNMAINNLNDDHVNYNEADVFKLLRQYRDEGKTFDVI 298
Query: 577 ILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSA 756
+LDPPK A K L A Y+++N +AM+L + GG+L+T SCSG M QS F ++ A
Sbjct: 299 VLDPPKFADNKSQLDGACRGYKDINMIAMQLLNPGGILLTFSCSGLM-QSDLFQKVVADA 357
Query: 757 AAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
A A R++ + ASDHP+ ++P+G+YL ++ RV
Sbjct: 358 ALDAKREVQFIERMHQASDHPISSAFPEGYYLKGLVARV 396
>sp|Q6LQ36|RLMI_PHOPR Ribosomal RNA large subunit methyltransferase I
OS=Photobacterium profundum GN=rlmI PE=3 SV=2
Length = 397
Score = 161 bits (405), Expect = 1e-038
Identities = 88/210 (41%), Positives = 124/210 (59%), Gaps = 2/210 (0%)
Frame = +1
Query: 226 PERSMVVENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAA 402
P+ + ENGI + + G KTGFY DQR++R GKRVL+ CY+GGF L A
Sbjct: 181 PKFVTIEENGIKINVDIVGGHKTGFYLDQRDSRQAAVKYVNGKRVLNCFCYTGGFGLYAL 240
Query: 403 RGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIVIL 582
+GGA+ V+ +D S PAL+ AR N N + F D + ++ R E +D+VI+
Sbjct: 241 KGGASQVVNVDVSQPALDTARLNTEANGLPVENAEFVNADVFKLLREYRERGEFFDVVIM 300
Query: 583 DPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSAAA 762
DPPK A K L A Y+++N LAM++ + GG+L+T SCSG M +G F I+ AA
Sbjct: 301 DPPKFAESKSQLVGACRGYKDINMLAMQILNPGGILLTYSCSGLM-DNGLFQKIVADAAL 359
Query: 763 MAGRKITVVREAGAASDHPLDPSYPQGHYL 852
A R++ + G A+DHPLD +YP+G YL
Sbjct: 360 DAHREVQFIERFGQAADHPLDSAYPEGFYL 389
>sp|A8GCM8|RLMI_SERP5 Ribosomal RNA large subunit methyltransferase I
OS=Serratia proteamaculans (strain 568) GN=rlmI PE=3 SV=1
Length = 396
Score = 160 bits (404), Expect = 1e-038
Identities = 82/212 (38%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Frame = +1
Query: 241 VVENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAARGGAT 417
+ E+G+ + + +G KTGFY DQR++R SAG+RVL+ Y+G FA++A GG T
Sbjct: 185 ITEHGMKLLVDIQQGHKTGFYLDQRDSRLAARNYSAGRRVLNCFSYTGAFAVSALMGGCT 244
Query: 418 SVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIVILDPPKL 597
V+ +D+S AL++A++NV LN +D K F + D + ++ ++ E +D++I+DPPK
Sbjct: 245 QVISVDTSQAALDIAKQNVELNQLDLSKAEFVRDDVFQLLRAYRTQGEKFDLIIMDPPKF 304
Query: 598 APRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSAAAMAGRK 777
K L A Y+++N LA++L + GG+L++ SCSG M + F IL AA AGR
Sbjct: 305 VENKNQLAGACRGYKDINMLALQLLNPGGILLSFSCSGLM-PTDLFQKILADAAVDAGRD 363
Query: 778 ITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
+ + + A+DHP+ +YP+G YL RV
Sbjct: 364 VQFIEQYRQAADHPVIATYPEGLYLKGFACRV 395
>sp|A1S9W1|RLMI_SHEAM Ribosomal RNA large subunit methyltransferase I
OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rlmI PE=3
SV=1
Length = 396
Score = 160 bits (404), Expect = 1e-038
Identities = 86/219 (39%), Positives = 128/219 (58%), Gaps = 3/219 (1%)
Frame = +1
Query: 223 LPERSMVV-ENGITYAISLE-GQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALN 396
LP +++ ENGI A+ +E G KTGFY DQR+NR GK VL+ CY+G F L
Sbjct: 178 LPAMPLIIEENGIKIAVDVEKGHKTGFYLDQRDNRAMAGRFVEGKSVLNCFCYTGTFGLY 237
Query: 397 AARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIV 576
AA+ GA S+ +D S AL+ AR N+ +N ++ V + + D + ++ +T+D++
Sbjct: 238 AAKAGAASIENVDVSTLALDTARHNMAINGLNDDHVTYSEADVFKLLRQYRDEGKTFDVI 297
Query: 577 ILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSA 756
+LDPPK A K L+ A Y+++N +AM+L GG L+T SCSG M + F I+ A
Sbjct: 298 VLDPPKFADNKAQLNGACRGYKDINMIAMQLLKPGGTLLTFSCSGLM-PADLFQKIVADA 356
Query: 757 AAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
A AGR + ASDHP+ ++P+G YL ++ RV
Sbjct: 357 ALDAGRDAQFIERLSQASDHPIGAAFPEGFYLKGLVARV 395
>sp|A7ME44|RLMI_ENTS8 Ribosomal RNA large subunit methyltransferase I
OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=rlmI PE=3 SV=1
Length = 396
Score = 158 bits (397), Expect = 1e-037
Identities = 85/230 (36%), Positives = 134/230 (58%), Gaps = 3/230 (1%)
Frame = +1
Query: 187 KLTQSSSSSSPPLPERSMVVENGITYAISLE-GQKTGFYTDQRENRHFISTISAGKRVLD 363
+L Q S P P+ + E+G+ + ++ G KTG+Y DQR++R KRVL+
Sbjct: 168 ELAQGPVSGELP-PDLLAIEEHGMKLLVDIKGGHKTGYYLDQRDSRFATRRYVEDKRVLN 226
Query: 364 LCCYSGGFALNAARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKG 543
Y+GGFA++A GG V+ +D+S AL++A++NV LN +D K F + D + ++
Sbjct: 227 CFSYTGGFAVSALMGGCRQVISVDTSQDALDVAKQNVELNKLDLSKAEFVRDDVFKLLRK 286
Query: 544 ALSREETWDIVILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQ 723
+ ET+D++++DPPK K L A Y+++N LA++L + GG+L+T SCSG MT
Sbjct: 287 YRDQGETFDVIVMDPPKFVENKSQLQGACRGYKDINMLAIQLLNPGGILLTFSCSGLMT- 345
Query: 724 SGKFLGILQSAAAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
+ F I+ AA AGR + + + A+DHP+ SYP+G YL V
Sbjct: 346 TDLFQKIVADAATDAGRDVQFIEQFRQAADHPVIASYPEGLYLKGFACHV 395
>sp|Q0HLL4|RLMI_SHESM Ribosomal RNA large subunit methyltransferase I
OS=Shewanella sp. (strain MR-4) GN=rlmI PE=3 SV=1
Length = 396
Score = 158 bits (397), Expect = 1e-037
Identities = 85/219 (38%), Positives = 133/219 (60%), Gaps = 3/219 (1%)
Frame = +1
Query: 223 LPERSMVV-ENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALN 396
LPE +++ ENGI A+ + +G KTGFY DQR+NR + GK VL+ CY+G F L
Sbjct: 178 LPEMPVIIEENGIKIAVDVTKGHKTGFYLDQRDNRAMAARFVKGKSVLNCFCYTGTFGLY 237
Query: 397 AARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIV 576
AA+ GA S+ +D S AL+ AR N+ +N ++ V + + D + ++ +T+D++
Sbjct: 238 AAKAGAASIENVDVSALALDTARLNMRVNGLNDDNVHYNEADVFKLLRQYRDEGKTFDVI 297
Query: 577 ILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSA 756
+LDPPK A K L+ A Y+++N +A++L + GG+L+T SCSG M + F I+ A
Sbjct: 298 VLDPPKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLM-PADLFQKIVADA 356
Query: 757 AAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
A A R+I + ASDHP+ ++P+G YL ++ RV
Sbjct: 357 ALDAKREIQFIERLSQASDHPIGSAFPEGFYLKGLVARV 395
>sp|Q0HXZ5|RLMI_SHESR Ribosomal RNA large subunit methyltransferase I
OS=Shewanella sp. (strain MR-7) GN=rlmI PE=3 SV=1
Length = 396
Score = 158 bits (397), Expect = 1e-037
Identities = 85/219 (38%), Positives = 133/219 (60%), Gaps = 3/219 (1%)
Frame = +1
Query: 223 LPERSMVV-ENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALN 396
LPE +++ ENGI A+ + +G KTGFY DQR+NR + GK VL+ CY+G F L
Sbjct: 178 LPEMPVIIEENGIKIAVDVTKGHKTGFYLDQRDNRAMAARFVKGKSVLNCFCYTGTFGLY 237
Query: 397 AARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIV 576
AA+ GA S+ +D S AL+ AR N+ +N ++ V + + D + ++ +T+D++
Sbjct: 238 AAKAGAASIENVDVSALALDTARLNMRVNGLNDDNVHYNEADVFKLLRQYRDEGKTFDVI 297
Query: 577 ILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSA 756
+LDPPK A K L+ A Y+++N +A++L + GG+L+T SCSG M + F I+ A
Sbjct: 298 VLDPPKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLM-PADLFQKIVADA 356
Query: 757 AAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
A A R+I + ASDHP+ ++P+G YL ++ RV
Sbjct: 357 ALDAKREIQFIERLSQASDHPIGSAFPEGFYLKGLVARV 395
>sp|Q8EHR8|RLMI_SHEON Ribosomal RNA large subunit methyltransferase I
OS=Shewanella oneidensis GN=rlmI PE=3 SV=1
Length = 396
Score = 157 bits (396), Expect = 1e-037
Identities = 85/219 (38%), Positives = 132/219 (60%), Gaps = 3/219 (1%)
Frame = +1
Query: 223 LPERSMVV-ENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALN 396
LPE +++ ENGI A+ + +G KTGFY DQR+NR + GK VL+ CY+G F L
Sbjct: 178 LPEMPLIIEENGIKIAVDVTKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLY 237
Query: 397 AARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIV 576
AA+ GA S+ +D S AL+ AR N+ +N + V + + D + ++ +T+D++
Sbjct: 238 AAKAGAASIENVDVSSLALDTARLNMRVNGLSDDNVHYNEADVFKLLRQYRDEGKTFDVI 297
Query: 577 ILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSA 756
+LDPPK A K L+ A Y+++N +A++L + GG+L+T SCSG M + F I+ A
Sbjct: 298 VLDPPKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLM-PADLFQKIVADA 356
Query: 757 AAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
A A R+I + ASDHP+ ++P+G YL ++ RV
Sbjct: 357 ALDAKREIQFIERLSQASDHPIGSAFPEGFYLKGLVARV 395
>sp|A0KTU3|RLMI_SHESA Ribosomal RNA large subunit methyltransferase I
OS=Shewanella sp. (strain ANA-3) GN=rlmI PE=3 SV=1
Length = 396
Score = 157 bits (395), Expect = 2e-037
Identities = 85/219 (38%), Positives = 132/219 (60%), Gaps = 3/219 (1%)
Frame = +1
Query: 223 LPERSMVV-ENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALN 396
LPE +++ ENGI A+ + +G KTGFY DQR+NR + GK VL+ CY+G F L
Sbjct: 178 LPEMPVIIEENGIKIAVDVTKGHKTGFYLDQRDNRAMAARFVKGKSVLNCFCYTGTFGLY 237
Query: 397 AARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIV 576
AA GA S+ +D S AL+ AR N+ +N ++ V + + D + ++ +T+D++
Sbjct: 238 AANAGAASIENVDVSALALDTARLNMRVNGLNDDNVHYNEADVFKLLRQYRDEGKTFDVI 297
Query: 577 ILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSA 756
+LDPPK A K L+ A Y+++N +A++L + GG+L+T SCSG M + F I+ A
Sbjct: 298 VLDPPKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLM-PADLFQKIVADA 356
Query: 757 AAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
A A R+I + ASDHP+ ++P+G YL ++ RV
Sbjct: 357 ALDAKREIQFIERLSQASDHPIGSAFPEGFYLKGLVARV 395
>sp|B2VDG5|RLMI_ERWT9 Ribosomal RNA large subunit methyltransferase I OS=Erwinia
tasmaniensis (strain DSM 17950 / Et1/99) GN=rlmI PE=3 SV=1
Length = 396
Score = 156 bits (394), Expect = 2e-037
Identities = 87/230 (37%), Positives = 132/230 (57%), Gaps = 3/230 (1%)
Frame = +1
Query: 187 KLTQSSSSSSPPLPERSMVVENGITYAISLE-GQKTGFYTDQRENRHFISTISAGKRVLD 363
+LTQ P P + E+G+ + ++ G KTG+Y DQR++R + G+RVL+
Sbjct: 168 ELTQGVVLGDAP-PPLLPITEHGMKLLVDIQTGHKTGYYLDQRDSRQATRRYAQGRRVLN 226
Query: 364 LCCYSGGFALNAARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKG 543
Y+GGFA++A G V+ +D+S AL++AR+NV LN +D K F + D + ++
Sbjct: 227 CFSYTGGFAVSALMGNCKEVISVDTSQAALDVARQNVELNGLDVSKAHFQRDDVFKLLRR 286
Query: 544 ALSREETWDIVILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQ 723
E +D++I+DPPK K L A Y+++N LAM+L + GG+LMT SCSG M
Sbjct: 287 YRDEGEKFDLIIMDPPKFVENKNQLMGACRGYKDINMLAMQLLNPGGMLMTFSCSGLMA- 345
Query: 724 SGKFLGILQSAAAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
+ F IL AA A R++ + + A+DHP+ SYP+G YL RV
Sbjct: 346 TDLFQKILADAAVDAQREVQFIEQFRQAADHPVISSYPEGMYLKGFACRV 395
>sp|Q8Z7R6|RLMI_SALTI Ribosomal RNA large subunit methyltransferase I
OS=Salmonella typhi GN=rlmI PE=3 SV=1
Length = 403
Score = 156 bits (394), Expect = 2e-037
Identities = 86/229 (37%), Positives = 132/229 (57%), Gaps = 3/229 (1%)
Frame = +1
Query: 190 LTQSSSSSSPPLPERSMVVENGITYAISLE-GQKTGFYTDQRENRHFISTISAGKRVLDL 366
LTQ + P P + E+G+ + ++ G KTG+Y DQR++R +RVL+
Sbjct: 176 LTQGPVTGELP-PALLPIEEHGMKLLVDIQGGHKTGYYLDQRDSRLVTRRYVENQRVLNC 234
Query: 367 CCYSGGFALNAARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGA 546
Y+GGFA++A GG V+ +D+S AL++AR+NV LN +D K F + D + ++
Sbjct: 235 FSYTGGFAVSALMGGCRQVVSVDTSQDALDIARQNVELNQLDLSKAEFVRDDVFKLLRAY 294
Query: 547 LSREETWDIVILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQS 726
E +D++I+DPPK K L A Y+++N LA++L + GG+L+T SCSG MT S
Sbjct: 295 REHGEKFDVIIMDPPKFVENKSQLMGACRGYKDINMLAIQLLNPGGILLTFSCSGLMT-S 353
Query: 727 GKFLGILQSAAAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
F I+ AA AGR + + + A+DHP+ +YP+G YL RV
Sbjct: 354 DLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFACRV 402
>sp|B5XY38|RLMI_KLEP3 Ribosomal RNA large subunit methyltransferase I
OS=Klebsiella pneumoniae (strain 342) GN=rlmI PE=3 SV=2
Length = 400
Score = 154 bits (388), Expect = 1e-036
Identities = 81/212 (38%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Frame = +1
Query: 241 VVENGITYAISLE-GQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAARGGAT 417
+ E+G+ + ++ G KTG+Y DQR++R A KRVL+ Y+GGFA++A GG
Sbjct: 189 ITEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVADKRVLNCFSYTGGFAVSALMGGCR 248
Query: 418 SVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIVILDPPKL 597
V +D+S AL++AR+NV LN +D K F + D + ++ + E +D++++DPPK
Sbjct: 249 QVTSVDTSQEALDVARQNVELNGLDLSKAEFVRDDVFKLLRKYRDQGEKFDVIVMDPPKF 308
Query: 598 APRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSAAAMAGRK 777
K L A Y+++N LA++L + GG+L+T SCSG MT + F I+ AA AGR
Sbjct: 309 VENKSQLMGACRGYKDINMLAIQLLNPGGVLLTFSCSGLMT-TDLFQKIIADAAIDAGRD 367
Query: 778 ITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
+ + + A+DHP+ +YP+G YL RV
Sbjct: 368 VQFIEQFRQAADHPVIATYPEGLYLKGFACRV 399
>sp|A6T766|RLMI_KLEP7 Ribosomal RNA large subunit methyltransferase I
OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH
78578) GN=rlmI PE=3 SV=2
Length = 400
Score = 153 bits (386), Expect = 2e-036
Identities = 80/212 (37%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Frame = +1
Query: 241 VVENGITYAISLE-GQKTGFYTDQRENRHFISTISAGKRVLDLCCYSGGFALNAARGGAT 417
+ E+G+ + ++ G KTG+Y DQR++R A KRVL+ Y+GGFA++A GG
Sbjct: 189 ITEHGMKLLVDIQGGHKTGYYLDQRDSRLATRRYVADKRVLNCFSYTGGFAVSALMGGCR 248
Query: 418 SVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGALSREETWDIVILDPPKL 597
V +D+S AL++AR+NV +N +D K F + D + ++ + E +D++++DPPK
Sbjct: 249 QVTSVDTSQEALDVARQNVEINGLDLSKAEFVRDDVFKLLRKYRDQGEKFDVIVMDPPKF 308
Query: 598 APRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQSGKFLGILQSAAAMAGRK 777
K L A Y+++N LA++L + GG+L+T SCSG MT + F I+ AA AGR
Sbjct: 309 VENKSQLMGACRGYKDINMLAIQLLNPGGVLLTFSCSGLMT-TDLFQKIIADAAIDAGRD 367
Query: 778 ITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
+ + + A+DHP+ +YP+G YL RV
Sbjct: 368 VQFIEQFRQAADHPVIATYPEGLYLKGFACRV 399
>sp|Q1CA17|RLMI_YERPA Ribosomal RNA large subunit methyltransferase I
OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=rlmI PE=3 SV=1
Length = 396
Score = 147 bits (370), Expect = 1e-034
Identities = 82/229 (35%), Positives = 128/229 (55%), Gaps = 3/229 (1%)
Frame = +1
Query: 190 LTQSSSSSSPPLPERSMVVENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDL 366
LTQ P P + ENG+ + + +G KTGFY DQR++R + G+RVL+
Sbjct: 169 LTQGLICGEMP-PALLPISENGMQLFVDIQQGHKTGFYLDQRDSRLAARNYANGRRVLNC 227
Query: 367 CCYSGGFALNAARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGA 546
Y+G FA+ A G V+ +D+S L++A++N+ LN +D K F + D + ++
Sbjct: 228 FSYTGAFAVAALMGNCQQVISVDTSQSVLDIAKQNIELNQLDLSKTEFVRDDVFQLLRSY 287
Query: 547 LSREETWDIVILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQS 726
++ E +D++I+DPPK K L +A Y+++N LA++L GG+L++ SCSG M
Sbjct: 288 RAQGEKFDLIIMDPPKFVENKSQLASACRGYKDINMLAIQLLRPGGILLSFSCSGLMPVD 347
Query: 727 GKFLGILQSAAAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
F IL AA AG I + + A+DHP+ +YP+G YL RV
Sbjct: 348 -LFQKILADAALDAGHDIQFIEQFRQAADHPVIAAYPEGLYLKGFACRV 395
>sp|B2JYU4|RLMI_YERPB Ribosomal RNA large subunit methyltransferase I
OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=rlmI PE=3
SV=1
Length = 396
Score = 147 bits (370), Expect = 1e-034
Identities = 82/229 (35%), Positives = 128/229 (55%), Gaps = 3/229 (1%)
Frame = +1
Query: 190 LTQSSSSSSPPLPERSMVVENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDL 366
LTQ P P + ENG+ + + +G KTGFY DQR++R + G+RVL+
Sbjct: 169 LTQGLICGEMP-PALLPISENGMQLFVDIQQGHKTGFYLDQRDSRLAARNYANGRRVLNC 227
Query: 367 CCYSGGFALNAARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGA 546
Y+G FA+ A G V+ +D+S L++A++N+ LN +D K F + D + ++
Sbjct: 228 FSYTGAFAVAALMGNCQQVISVDTSQSVLDIAKQNIELNQLDLSKTEFVRDDVFQLLRSY 287
Query: 547 LSREETWDIVILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQS 726
++ E +D++I+DPPK K L +A Y+++N LA++L GG+L++ SCSG M
Sbjct: 288 RAQGEKFDLIIMDPPKFVENKSQLASACRGYKDINMLAIQLLRPGGILLSFSCSGLMPVD 347
Query: 727 GKFLGILQSAAAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
F IL AA AG I + + A+DHP+ +YP+G YL RV
Sbjct: 348 -LFQKILADAALDAGHDIQFIEQFRQAADHPVIAAYPEGLYLKGFACRV 395
>sp|Q7CHM1|RLMI_YERPE Ribosomal RNA large subunit methyltransferase I
OS=Yersinia pestis GN=rlmI PE=3 SV=1
Length = 396
Score = 147 bits (370), Expect = 1e-034
Identities = 82/229 (35%), Positives = 128/229 (55%), Gaps = 3/229 (1%)
Frame = +1
Query: 190 LTQSSSSSSPPLPERSMVVENGITYAISL-EGQKTGFYTDQRENRHFISTISAGKRVLDL 366
LTQ P P + ENG+ + + +G KTGFY DQR++R + G+RVL+
Sbjct: 169 LTQGLICGEMP-PALLPISENGMQLFVDIQQGHKTGFYLDQRDSRLAARNYANGRRVLNC 227
Query: 367 CCYSGGFALNAARGGATSVLGIDSSLPALELARENVILNHMDPGKVVFFKQDSTEFMKGA 546
Y+G FA+ A G V+ +D+S L++A++N+ LN +D K F + D + ++
Sbjct: 228 FSYTGAFAVAALMGNCQQVISVDTSQSVLDIAKQNIELNQLDLSKTEFVRDDVFQLLRSY 287
Query: 547 LSREETWDIVILDPPKLAPRKKVLHNAAGMYRNLNSLAMRLTSSGGLLMTCSCSGAMTQS 726
++ E +D++I+DPPK K L +A Y+++N LA++L GG+L++ SCSG M
Sbjct: 288 RAQGEKFDLIIMDPPKFVENKSQLASACRGYKDINMLAIQLLRPGGILLSFSCSGLMPVD 347
Query: 727 GKFLGILQSAAAMAGRKITVVREAGAASDHPLDPSYPQGHYLSNILLRV 873
F IL AA AG I + + A+DHP+ +YP+G YL RV
Sbjct: 348 -LFQKILADAALDAGHDIQFIEQFRQAADHPVIAAYPEGLYLKGFACRV 395
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,598,068,396
Number of Sequences: 518415
Number of Extensions: 17598068396
Number of Successful Extensions: 121269498
Number of sequences better than 0.0: 0
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