BLASTX 7.6.2
Query= UN04479 /QuerySize=2063
(2062 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G24690.1 | Symbols: | INVOLVED IN: biological... 880 8e-256
TAIR9_protein||AT5G22790.1 | Symbols: RER1 | RER1 (RETICULATA-RE... 120 5e-027
TAIR9_protein||AT2G40400.1 | Symbols: | unknown protein | chr2:... 77 4e-014
TAIR9_protein||AT2G40400.2 | Symbols: | unknown protein | chr2:... 77 4e-014
TAIR9_protein||AT3G56140.1 | Symbols: | unknown protein | chr3:... 75 1e-013
TAIR9_protein||AT2G37860.3 | Symbols: LCD1 | LCD1 (LOWER CELL DE... 66 7e-011
TAIR9_protein||AT2G37860.2 | Symbols: LCD1 | LCD1 (LOWER CELL DE... 64 3e-010
TAIR9_protein||AT2G37860.1 | Symbols: LCD1 | LCD1 (LOWER CELL DE... 64 3e-010
TAIR9_protein||AT1G62760.1 | Symbols: | invertase/pectin methyl... 52 1e-006
TAIR9_protein||AT3G10810.1 | Symbols: | zinc finger (C3HC4-type... 49 8e-006
>TAIR9_protein||AT5G24690.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: mitochondrion, chloroplast, plastid, chloroplast
inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: RER1 (RETICULATA-RELATED 1)
(TAIR:AT5G22790.1); Has 251 Blast hits to 242 proteins in 37 species:
Archae - 0; Bacteria - 8; Metazoa - 20; Fungi - 4; Plants - 172;
Viruses - 3; Other Eukaryotes - 44 (source: NCBI BLink). |
chr5:8455783-8458513 REVERSE
Length = 522
Score = 880 bits (2272), Expect = 8e-256
Identities = 451/519 (86%), Positives = 476/519 (91%), Gaps = 10/519 (1%)
Frame = +1
Query: 205 SVVAPKPLSPLKPSLPIPPRPISTLPCKLRRSGCFIRASSSSSLIDSVGDSVSGLERCLQ 384
SVVAPKPLSPLKP LPI PRP+ TLPCKLRR F+RASSSS L+D DSVSGLERCLQ
Sbjct: 8 SVVAPKPLSPLKPCLPI-PRPLVTLPCKLRRG--FVRASSSSFLVD---DSVSGLERCLQ 61
Query: 385 LQFSGELGTSSS---SGSAQMRPEMKGGKFGSAAAVTLEKGKLDMTQKKVESTPEIATGG 555
L ELGTSSS S S QM P MK GKFGS AVTLEKGKLDMTQK E++PEIATGG
Sbjct: 62 LPSGVELGTSSSGSFSASTQMCPVMK-GKFGSVGAVTLEKGKLDMTQKISETSPEIATGG 120
Query: 556 GGGDIGKSANFGGGDGGDDDGDDDDYFDDFDDDDDGDEGGLFRRRMFLAELFDRKFVDAV 735
GGG+IGKS N GGGDGGDD+GDDDDYFD+FDD D+GD+ GLFRRRMFLAE+FDRKFVDAV
Sbjct: 121 GGGNIGKSINNGGGDGGDDNGDDDDYFDEFDDGDEGDDDGLFRRRMFLAEIFDRKFVDAV 180
Query: 736 LNEWQKTMLDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRFISRALPQGLSRAFVGR 915
LNEWQKTM+DLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTR ISRALPQGLSRAFVGR
Sbjct: 181 LNEWQKTMMDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRMISRALPQGLSRAFVGR 240
Query: 916 MLADPSFLYRLLLEQAATVGCSVWWEVKTRKERIKEEWDLALINVLTVSACNAAAVWLLA 1095
MLADP+FLY+LLLEQAATVGCSVWWEVK RK R+KEEWDLALINVLTVSACNAAAVWLLA
Sbjct: 241 MLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVWLLA 300
Query: 1096 PCRSYGNTFRFDLQNTLQKLPNNVFEMSYPLREFDLQKRIHSLFYKAAELSILGVATGTL 1275
PCRSYGNTFRFDLQNTLQKLPNN+FEMSYPLREFDLQKR HSLFYKAAELSILG+A GTL
Sbjct: 301 PCRSYGNTFRFDLQNTLQKLPNNLFEMSYPLREFDLQKRFHSLFYKAAELSILGLAAGTL 360
Query: 1276 QGSLSNFLAAKKKNRVSVTVPSITTNALGYGAFLGLYANLRYQLLCGFERAMSNHFDVIG 1455
QGSLSN LA KKKNRVSVTVPSI+TNALGYGAFLG+YANLRYQLLCGFER +S+HFDVIG
Sbjct: 361 QGSLSNVLAGKKKNRVSVTVPSISTNALGYGAFLGIYANLRYQLLCGFERGVSSHFDVIG 420
Query: 1456 VALFFGTAVRIMNVQLGERSRQVWLGVEADPLAQSDDLLAKAYNRPSEETAAKPESRWFI 1635
VALFFGTA+RIMNVQLGE+SRQVWLGVEADPLAQSDDLLAKAYNRPSEE AKP S+WFI
Sbjct: 421 VALFFGTALRIMNVQLGEKSRQVWLGVEADPLAQSDDLLAKAYNRPSEEAVAKPSSKWFI 480
Query: 1636 SKNAIVSGLLGMKQQDSASDSPPPKARRKRIVRKKVAAS 1752
SKNAIVSGLLG KQ+DS SDSPPPKARRKRIVRKKVAAS
Sbjct: 481 SKNAIVSGLLGKKQEDSVSDSPPPKARRKRIVRKKVAAS 519
>TAIR9_protein||AT5G22790.1 | Symbols: RER1 | RER1 (RETICULATA-RELATED 1) |
chr5:7599395-7601573 REVERSE
Length = 434
Score = 120 bits (299), Expect = 5e-027
Identities = 106/346 (30%), Positives = 163/346 (47%), Gaps = 28/346 (8%)
Frame = +1
Query: 496 GKLDMTQKKVESTPEIATGGGGGDIGKSANFGGGDGGDDDGDDDDYFDDFDDDDDGDEGG 675
G D T +E PE+ G GG + G N GGG+GG+ DG D + DD DE
Sbjct: 85 GVKDETLSDLE--PELDDGDGGDENGN--NDGGGNGGNGDGGGGG--GDGEGDDGEDEAD 138
Query: 676 LFRRRMFLAELFDRKFVDAVLNEWQKTMLDLPAGLRQAYEMGLVSSAQMVKFLAINARPT 855
+ F L KF + V+ E ++ + LP + +A + + ++++L +
Sbjct: 139 KAEEKEFGPIL---KF-EEVMKETERRGITLPEDMLEAAKSVGIRKLFLLRYLDLQGSVW 194
Query: 856 TTRFISRALPQGLSRAFVGRMLADPSFLYRLLLEQAATVGCSVWWEVKTRKERIKEEWDL 1035
F+ R+ RMLADPSFL+++ E A C+ + EV+ R E E++L
Sbjct: 195 PLGFLMRSCAM-----LRNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFEL 249
Query: 1036 ALINVLTVSACNAAAVWLLAPCRSYG-----NTFRF-DLQNTLQKLPNNVFEMSYPLREF 1197
++L + A V LLAP G +T F DL+ LP++VFE P +F
Sbjct: 250 YAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKF 309
Query: 1198 DLQKRIHSLFYKAAELSILGVATGTL-QGSLSNFLAAK---KKNRVSVTVPSITTNALGY 1365
+ +RI + FYK +G G + QG + + AK KK+ V +P + +A +
Sbjct: 310 SVNQRIATFFYKGLLYGSVGFGCGLIGQGIANLIMTAKRSVKKSEEDVPIPPLFESAALW 369
Query: 1366 GAFLGLYANLRYQLLCGFERAMSNHF---DVIGVALFFGTAVRIMN 1494
G FLGL +N RYQ++ G ER + + VA+ F VR N
Sbjct: 370 GVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVGVRFAN 415
>TAIR9_protein||AT2G40400.1 | Symbols: | unknown protein |
chr2:16869363-16872569 FORWARD
Length = 736
Score = 77 bits (188), Expect = 4e-014
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Frame = +1
Query: 709 FDRKFVDAVLNEWQKTMLDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRFISRALPQ 888
FDR + V+N + LP +++ ++GLVS + F + P + R
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQR---- 464
Query: 889 GLSRAFVGRMLADPSFLYRLLLEQAATVGCSVWWEVKTRKERIKEEWDLALINVLTVSAC 1068
+ F R+LADP FL RL +E+A ++ ++ + + RKE EE D + + + S
Sbjct: 465 --FQGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 522
Query: 1069 NAAAVWLLAPCRSY--------GNTFRFDLQNTLQKLPNNVFEMSYPLREFDLQKRIHSL 1224
+ VWL AP S+ G L+ L +P+N F+ S +E+ L RI S+
Sbjct: 523 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 582
Query: 1225 FYKAAELSILGVATGTLQGSLSNFLAAKKK 1314
+L+ +GV + SN L A +K
Sbjct: 583 IIGGLKLAGVGVVSSFAAVGSSNALYAIRK 612
>TAIR9_protein||AT2G40400.2 | Symbols: | unknown protein |
chr2:16869363-16872569 FORWARD
Length = 736
Score = 77 bits (188), Expect = 4e-014
Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 14/210 (6%)
Frame = +1
Query: 709 FDRKFVDAVLNEWQKTMLDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRFISRALPQ 888
FDR + V+N + LP +++ ++GLVS + F + P + R
Sbjct: 409 FDRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQR---- 464
Query: 889 GLSRAFVGRMLADPSFLYRLLLEQAATVGCSVWWEVKTRKERIKEEWDLALINVLTVSAC 1068
+ F R+LADP FL RL +E+A ++ ++ + + RKE EE D + + + S
Sbjct: 465 --FQGFRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVV 522
Query: 1069 NAAAVWLLAPCRSY--------GNTFRFDLQNTLQKLPNNVFEMSYPLREFDLQKRIHSL 1224
+ VWL AP S+ G L+ L +P+N F+ S +E+ L RI S+
Sbjct: 523 DFFTVWLPAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASV 582
Query: 1225 FYKAAELSILGVATGTLQGSLSNFLAAKKK 1314
+L+ +GV + SN L A +K
Sbjct: 583 IIGGLKLAGVGVVSSFAAVGSSNALYAIRK 612
>TAIR9_protein||AT3G56140.1 | Symbols: | unknown protein |
chr3:20829407-20832669 FORWARD
Length = 746
Score = 75 bits (184), Expect = 1e-013
Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 14/210 (6%)
Frame = +1
Query: 709 FDRKFVDAVLNEWQKTMLDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRFISRALPQ 888
FDR + V+N + LP ++ ++GLVS + + P + R
Sbjct: 418 FDRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQR---- 473
Query: 889 GLSRAFVGRMLADPSFLYRLLLEQAATVGCSVWWEVKTRKERIKEEWDLALINVLTVSAC 1068
+ F R+LADP FL RL +E+A ++ ++ + + RKE EE D + + + S
Sbjct: 474 --FQGFRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVV 531
Query: 1069 NAAAVWLLAPCRSY--------GNTFRFDLQNTLQKLPNNVFEMSYPLREFDLQKRIHSL 1224
+ VWL AP S+ G L+ L +P+N F+ S RE++L RI S+
Sbjct: 532 DFFTVWLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASV 591
Query: 1225 FYKAAELSILGVATGTLQGSLSNFLAAKKK 1314
+L+ +GV + SN L +K
Sbjct: 592 IVGGLKLAGVGVVSSFAAVGASNALNIARK 621
>TAIR9_protein||AT2G37860.3 | Symbols: LCD1 | LCD1 (LOWER CELL DENSITY 1) |
chr2:15856952-15858793 FORWARD
Length = 433
Score = 66 bits (160), Expect = 7e-011
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 10/202 (4%)
Frame = +1
Query: 727 DAVLNEWQKTMLDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRFISRALPQGLSRAF 906
+ V+ E + LP+ + +A + + ++++L + + F R+
Sbjct: 152 EEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAM-----L 206
Query: 907 VGRMLADPSFLYRLLLEQAATVGCSVWWEVKTRKERIKEEWDLALINVLTVSACNAAAVW 1086
RMLADPSFL+++ E C+ EV+ R + E++L + ++L + N A V
Sbjct: 207 RNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVG 266
Query: 1087 LLAPCRSYGNT-----FRFDLQNTLQKLPNNVFEMSYPLREFDLQKRIHSLFYKAAELSI 1251
+LAP +G F + LP++VFE P F Q+R+ + FYK
Sbjct: 267 MLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGA 326
Query: 1252 LGVATGTLQGSLSNFLAAKKKN 1317
+G G + ++N + K+N
Sbjct: 327 VGFGCGIVGQGIANLIMTAKRN 348
>TAIR9_protein||AT2G37860.2 | Symbols: LCD1 | LCD1 (LOWER CELL DENSITY 1) |
chr2:15856952-15858351 FORWARD
Length = 348
Score = 64 bits (154), Expect = 3e-010
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Frame = +1
Query: 727 DAVLNEWQKTMLDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRFISRALPQGLSRAF 906
+ V+ E + LP+ + +A + + ++++L + + F R+
Sbjct: 152 EEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAM-----L 206
Query: 907 VGRMLADPSFLYRLLLEQAATVGCSVWWEVKTRKERIKEEWDLALINVLTVSACNAAAVW 1086
RMLADPSFL+++ E C+ EV+ R + E++L + ++L + N A V
Sbjct: 207 RNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVG 266
Query: 1087 LLAPCRSYGNT-----FRFDLQNTLQKLPNNVFEMSYPLREFDLQKRIHSLFYKAAELSI 1251
+LAP +G F + LP++VFE P F Q+R+ + FYK
Sbjct: 267 MLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGA 326
Query: 1252 LGVATGTLQGSLSNFLAAKKK 1314
+G G + ++N + K+
Sbjct: 327 VGFGCGIVGQGIANLIMTAKR 347
>TAIR9_protein||AT2G37860.1 | Symbols: LCD1 | LCD1 (LOWER CELL DENSITY 1) |
chr2:15856952-15858351 FORWARD
Length = 348
Score = 64 bits (154), Expect = 3e-010
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 10/201 (4%)
Frame = +1
Query: 727 DAVLNEWQKTMLDLPAGLRQAYEMGLVSSAQMVKFLAINARPTTTRFISRALPQGLSRAF 906
+ V+ E + LP+ + +A + + ++++L + + F R+
Sbjct: 152 EEVMKETEARGATLPSDMLEAAKNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAM-----L 206
Query: 907 VGRMLADPSFLYRLLLEQAATVGCSVWWEVKTRKERIKEEWDLALINVLTVSACNAAAVW 1086
RMLADPSFL+++ E C+ EV+ R + E++L + ++L + N A V
Sbjct: 207 RNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVG 266
Query: 1087 LLAPCRSYGNT-----FRFDLQNTLQKLPNNVFEMSYPLREFDLQKRIHSLFYKAAELSI 1251
+LAP +G F + LP++VFE P F Q+R+ + FYK
Sbjct: 267 MLAPYVRFGQPSASPGFLGRMVFAYNALPSSVFEAERPGCRFSAQQRLATYFYKGIMYGA 326
Query: 1252 LGVATGTLQGSLSNFLAAKKK 1314
+G G + ++N + K+
Sbjct: 327 VGFGCGIVGQGIANLIMTAKR 347
>TAIR9_protein||AT1G62760.1 | Symbols: | invertase/pectin methylesterase
inhibitor family protein | chr1:23237574-23238512 REVERSE
Length = 313
Score = 52 bits (124), Expect = 1e-006
Identities = 40/97 (41%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Frame = -3
Query: 719 FLSKSSARNILRLKRPPSSPS-SSSSKSSK*SSSSPSSSPPSPPPKLALFPMSPPPPPVA 543
F++ SS+ L SSPS S S SS SS+ PSS PS PP L+L P SPPPPP +
Sbjct: 19 FITTSSS----SLSPSSSSPSLSPSPPSSSPSSAPPSSLSPSSPPPLSLSPSSPPPPPPS 74
Query: 542 ISGVDSTFFWVI----SSFPFSKVTAAAEPNFPPFIS 444
S + S + SS P S ++ P+ PP +S
Sbjct: 75 SSPLSSLSPSLSPSPPSSSPSSAPPSSLSPSSPPPLS 111
>TAIR9_protein||AT3G10810.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:3381848-3384227 REVERSE
Length = 497
Score = 49 bits (116), Expect = 8e-006
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1
Query: 661 HHHHHQNRQSNHHHHHHRHLRRHHRN 584
HHHHH + +HHHHHH H HH N
Sbjct: 331 HHHHHHHHHHHHHHHHHNHHHHHHHN 356
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,914,471,872
Number of Sequences: 33410
Number of Extensions: 2914471872
Number of Successful Extensions: 105817115
Number of sequences better than 0.0: 0
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