BLASTX 7.6.2
Query= UN04648 /QuerySize=776
(775 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphan... 428 4e-118
gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [R... 428 4e-118
gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [R... 428 7e-118
gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sati... 424 8e-117
gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus] 421 9e-116
gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus] 421 9e-116
gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing p... 363 2e-098
gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide rep... 363 2e-098
gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricope... 362 4e-098
gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat ... 361 1e-097
gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing p... 354 1e-095
gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus] 338 8e-091
gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-contain... 192 7e-047
gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing... 184 1e-044
gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-contai... 184 1e-044
gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing... 184 2e-044
gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thal... 184 2e-044
gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa] 181 9e-044
gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana] 180 3e-043
gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thal... 179 4e-043
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
Length = 687
Score = 428 bits (1100), Expect = 4e-118
Identities = 216/223 (96%), Gaps = 4/223 (1%)
Frame = +1
Query: 64 VCRFKSSSSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 243
VC FK SSSPA SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL
Sbjct: 5 VCGFK----CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 60
Query: 244 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 423
EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120
Query: 424 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 603
IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180
Query: 604 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus
sativus]
Length = 687
Score = 428 bits (1100), Expect = 4e-118
Identities = 216/223 (96%), Gaps = 4/223 (1%)
Frame = +1
Query: 64 VCRFKSSSSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 243
VC FK SSSPA SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL
Sbjct: 5 VCGFK----CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 60
Query: 244 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 423
EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120
Query: 424 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 603
IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180
Query: 604 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus
sativus]
Length = 687
Score = 428 bits (1098), Expect = 7e-118
Identities = 215/223 (96%), Positives = 216/223 (96%), Gaps = 4/223 (1%)
Frame = +1
Query: 64 VCRFKSSSSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 243
VC FK SSSPA SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL
Sbjct: 5 VCGFK----CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 60
Query: 244 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 423
EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 120
Query: 424 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 603
IKCFCSCSKLPFALSTFGK+TKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC
Sbjct: 121 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 180
Query: 604 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 424 bits (1089), Expect = 8e-117
Identities = 214/223 (95%), Gaps = 4/223 (1%)
Frame = +1
Query: 64 VCRFKSSSSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 243
VC FK SSSPA SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL
Sbjct: 5 VCGFK----CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 60
Query: 244 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 423
EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF IL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120
Query: 424 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 603
IKCFCSCSKLPFALSTFGKITKLGLHPDVVTF TLLHGLCVEDRVSEALNLFHQMFETTC
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMFETTC 180
Query: 604 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
Length = 687
Score = 421 bits (1080), Expect = 9e-116
Identities = 212/223 (95%), Positives = 213/223 (95%), Gaps = 4/223 (1%)
Frame = +1
Query: 64 VCRFKSSSSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 243
VC FK SSSPA SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL
Sbjct: 5 VCGFK----CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 60
Query: 244 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 423
EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF IL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120
Query: 424 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 603
IKCFCSCSKLPFALSTFGKITKLGLHPDVVTF TLLHGLCVEDRVSEAL+ FHQMFETTC
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180
Query: 604 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 421 bits (1080), Expect = 9e-116
Identities = 212/223 (95%), Positives = 213/223 (95%), Gaps = 4/223 (1%)
Frame = +1
Query: 64 VCRFKSSSSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 243
VC FK SSSPA SAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL
Sbjct: 5 VCGFK----CSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGL 60
Query: 244 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 423
EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSF IL
Sbjct: 61 EDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNIL 120
Query: 424 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTC 603
IKCFCSCSKLPFALSTFGKITKLGLHPDVVTF TLLHGLCVEDRVSEAL+ FHQMFETTC
Sbjct: 121 IKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFETTC 180
Query: 604 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 223
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein
[Raphanus sativus]
Length = 686
Score = 363 bits (930), Expect = 2e-098
Identities = 189/227 (83%), Positives = 204/227 (89%), Gaps = 10/227 (4%)
Frame = +1
Query: 58 ARVCRFKSSSSSSSSPAVSAARLFCTRSIRDTLAKAS--GESCEAGFGGESLKLQSGFHE 231
ARVCRF+SSSSSS VSAAR FCT SIR LA+ S GES EAGF GESLKL+SG +E
Sbjct: 3 ARVCRFESSSSSS----VSAARFFCTGSIRHALAEKSRDGESGEAGFRGESLKLRSGSYE 58
Query: 232 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 411
IKGLEDAIDLFSDMLRSRPLPSV+DF KLMG VVRMERPDLVISLYQKMERKQIRCDIYS
Sbjct: 59 IKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118
Query: 412 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 591
FTILIKCFCSCSKLPFALSTFGK+TKLGLHPDVVTF TLLHGLC++ RVSEAL+LFHQ+
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177
Query: 592 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
CRP+V+TFTTLMNGLCREGR+VEAVALLDRM+E+GLQP QITYG
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYG 221
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus
sativus]
Length = 683
Score = 363 bits (930), Expect = 2e-098
Identities = 189/227 (83%), Positives = 204/227 (89%), Gaps = 10/227 (4%)
Frame = +1
Query: 58 ARVCRFKSSSSSSSSPAVSAARLFCTRSIRDTLAKAS--GESCEAGFGGESLKLQSGFHE 231
ARVCRF+SSSSSS VSAAR FCT SIR LA+ S GES EAGF GESLKL+SG +E
Sbjct: 3 ARVCRFESSSSSS----VSAARFFCTGSIRHALAEKSRDGESGEAGFRGESLKLRSGSYE 58
Query: 232 IKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYS 411
IKGLEDAIDLFSDMLRSRPLPSV+DF KLMG VVRMERPDLVISLYQKMERKQIRCDIYS
Sbjct: 59 IKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118
Query: 412 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 591
FTILIKCFCSCSKLPFALSTFGK+TKLGLHPDVVTF TLLHGLC++ RVSEAL+LFHQ+
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI- 177
Query: 592 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
CRP+V+TFTTLMNGLCREGR+VEAVALLDRM+E+GLQP QITYG
Sbjct: 178 ---CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYG 221
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat
protein [Raphanus sativus]
Length = 686
Score = 362 bits (928), Expect = 4e-098
Identities = 183/218 (83%), Positives = 198/218 (90%), Gaps = 6/218 (2%)
Frame = +1
Query: 85 SSSSSSPAVSAARLFCTRSIRDTLAKAS--GESCEAGFGGESLKLQSGFHEIKGLEDAID 258
S S SSPAVSAARLFCTRSIRDTLAK S GES EAGFGGESLKLQSGFHEIKGL+DAID
Sbjct: 8 SGSYSSPAVSAARLFCTRSIRDTLAKKSRDGESDEAGFGGESLKLQSGFHEIKGLDDAID 67
Query: 259 LFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFC 438
LF M+RSRPLPSV+DFCKLMGVVVRM RPD+VISL++KME ++ C+ YSFTIL+KCFC
Sbjct: 68 LFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFC 127
Query: 439 SCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVV 618
SCSKLPFALSTFGKITKLG HP VVTFNTLLHGLCVEDR+SEAL+LFHQM C+PNVV
Sbjct: 128 SCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVV 183
Query: 619 TFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
TFTTLMNGLCREGR+VEAVALLDRM+EDGLQP QITYG
Sbjct: 184 TFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYG 221
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein
homologue [Raphanus sativus]
Length = 681
Score = 361 bits (924), Expect = 1e-097
Identities = 185/214 (86%), Positives = 194/214 (90%), Gaps = 6/214 (2%)
Frame = +1
Query: 97 SSPAVSAARLFCTRSIRDTLAKAS--GESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSD 270
S + SAARLFCTRSIR LAK S GES EAGF GESLKL+SGFHEIKGLEDAIDLFSD
Sbjct: 8 SGSSSSAARLFCTRSIRHALAKKSRDGESGEAGFRGESLKLRSGFHEIKGLEDAIDLFSD 67
Query: 271 MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 450
M+RSRPLPSV+DF KLMGVVVRMERPDLVISLYQKMERKQI CD+YSF ILIKCFCSCSK
Sbjct: 68 MVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSK 127
Query: 451 LPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT 630
LPFALSTFGKITKLG PDVVTF+TLLHGLCVEDRVSEAL+LFHQM CRPNVVTFTT
Sbjct: 128 LPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTT 183
Query: 631 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
LMNGLCREGR+VEAVALLDRM+EDGLQP QITYG
Sbjct: 184 LMNGLCREGRVVEAVALLDRMVEDGLQPNQITYG 217
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein
[Raphanus sativus]
Length = 654
Score = 354 bits (907), Expect = 1e-095
Identities = 177/216 (81%), Positives = 196/216 (90%), Gaps = 5/216 (2%)
Frame = +1
Query: 85 SSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLF 264
S SSSSPAVSAARLFCTRSIR LAK S + E+GFGGESLKL+SGFHEIKGLEDAIDLF
Sbjct: 8 SGSSSSPAVSAARLFCTRSIRHALAKKSRDG-ESGFGGESLKLRSGFHEIKGLEDAIDLF 66
Query: 265 SDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSC 444
DM+RSRPLPSV+DFCKLMGVVVRM R D+VISL++KME +++ C+ YSFTIL+KCFCSC
Sbjct: 67 GDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNAYSFTILMKCFCSC 126
Query: 445 SKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTF 624
SKLPFALSTFGKITKLG HP VVTF+TLLHGLCVEDR+SEAL+LFHQM C+PNVVTF
Sbjct: 127 SKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTF 182
Query: 625 TTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
TTLMNGLCREGR+VEAVALLDRM+EDGLQP QITYG
Sbjct: 183 TTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYG 218
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 338 bits (865), Expect = 8e-091
Identities = 168/212 (79%), Positives = 187/212 (88%), Gaps = 5/212 (2%)
Frame = +1
Query: 97 SSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDML 276
SS +V AARLFCTRSIR TLAK S GFGGE LKLQSGFHEIKGL+DAIDLF M+
Sbjct: 10 SSSSVPAARLFCTRSIRHTLAKKSSGKA-GGFGGERLKLQSGFHEIKGLDDAIDLFGYMV 68
Query: 277 RSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLP 456
RSRPLP V+DFCKL+GVVVRMERPD+VISL++KME ++I C+IYSFTILIKCFCSCSKLP
Sbjct: 69 RSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYSFTILIKCFCSCSKLP 128
Query: 457 FALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLM 636
FALSTFGKITKLG HP +VTF+TLLHGLCVEDRVSEAL+ FHQ+ C+PNV+ FTTLM
Sbjct: 129 FALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQI----CKPNVIAFTTLM 184
Query: 637 NGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
NGLCREGR+VEAVALLDRM+EDGLQP QITYG
Sbjct: 185 NGLCREGRVVEAVALLDRMVEDGLQPNQITYG 216
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 644
Score = 192 bits (486), Expect = 7e-047
Identities = 104/224 (46%), Positives = 141/224 (62%), Gaps = 11/224 (4%)
Frame = +1
Query: 91 SSSSPAVSAARLFCTRSIRDTLAKASGE---SCEAGFGGES-------LKLQSGFHEIKG 240
SS + RL T ++R L E CE GF S KL SG IK
Sbjct: 10 SSQASRFVQPRLLETGTLRIALINCPNELLFCCERGFSTFSDRNLSYRDKLSSGLVGIKA 69
Query: 241 LEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTI 420
+DA+DLF DM++SRPLP+V+DF +L + + ++ +LV++L ++ME K I IY+ +I
Sbjct: 70 -DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSI 128
Query: 421 LIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETT 600
+I CFC C KL +A ST GKI KLG PD V FNTLL+GLC+E RVSEAL L +M E
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 601 CRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
+P ++T TL+NGLC G++ +AV L+DRM+E G QP ++TYG
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYG 232
>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 666
Score = 184 bits (466), Expect = 1e-044
Identities = 98/187 (52%), Positives = 125/187 (66%), Gaps = 1/187 (0%)
Frame = +1
Query: 76 KSSSSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI 255
+ ++ S +++ RL R + + K+ + F GE LKL+SG H K L+DAI
Sbjct: 33 EKKNTKSGGVRLNSRRLIHGR-VAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAI 91
Query: 256 DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 435
D F M+RSRP + VD K++GV VRM RPD+ ISLY+KME ++I +IYSF ILIKCF
Sbjct: 92 DFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCF 151
Query: 436 CSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 615
C C KL F+LSTFGK+TKLG PDVVTFNTLLHGLC+EDR+SEAL LF M ET V
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 616 VTFTTLM 636
F ++
Sbjct: 212 ALFDQMV 218
>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 806
Score = 184 bits (466), Expect = 1e-044
Identities = 98/187 (52%), Positives = 125/187 (66%), Gaps = 1/187 (0%)
Frame = +1
Query: 76 KSSSSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI 255
+ ++ S +++ RL R + + K+ + F GE LKL+SG H K L+DAI
Sbjct: 33 EKKNTKSGGVRLNSRRLIHGR-VAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAI 91
Query: 256 DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 435
D F M+RSRP + VD K++GV VRM RPD+ ISLY+KME ++I +IYSF ILIKCF
Sbjct: 92 DFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCF 151
Query: 436 CSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNV 615
C C KL F+LSTFGK+TKLG PDVVTFNTLLHGLC+EDR+SEAL LF M ET V
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAV 211
Query: 616 VTFTTLM 636
F ++
Sbjct: 212 ALFDQMV 218
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 637
Score = 184 bits (465), Expect = 2e-044
Identities = 97/214 (45%), Positives = 138/214 (64%), Gaps = 11/214 (5%)
Frame = +1
Query: 121 RLFCTRSIRDTLAKASGE---SCEAGFGGES-------LKLQSGFHEIKGLEDAIDLFSD 270
RL T ++R L E CE GF S +L+SG +IK +DAIDLF D
Sbjct: 20 RLLETGTLRIALINCPNELSFCCERGFSAFSDRNLSYRERLRSGLVDIKA-DDAIDLFRD 78
Query: 271 MLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSK 450
M+ SRPLP+V+DF +L + + ++ DLV++L ++ME K I ++Y+ +I+I CFC C K
Sbjct: 79 MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 451 LPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTT 630
L A S GKI KLG P+ +TF+TL++GLC+E RVSEAL L +M E +P+++T T
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 631 LMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
L+NGLC G+ EA+ L+D+M+E G QP +TYG
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 232
>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
Length = 661
Score = 184 bits (465), Expect = 2e-044
Identities = 96/174 (55%), Positives = 121/174 (69%), Gaps = 1/174 (0%)
Frame = +1
Query: 76 KSSSSSSSSPAVSAARLFCTRSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAI 255
+ ++ S +++ RL R + + K+ + F GE LKL+SG H K L+DAI
Sbjct: 33 EKKNTKSGGVRLNSRRLIHGR-VAEKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAI 91
Query: 256 DLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCF 435
D F M+RSRP + VD K++GV VRM RPD+ ISLY+KME ++I +IYSF ILIKCF
Sbjct: 92 DFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCF 151
Query: 436 CSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMFET 597
C C KL F+LSTFGK+TKLG PDVVTFNTLLHGLC+EDR+SEAL LF M ET
Sbjct: 152 CDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
>gi|147742776|gb|ABQ50556.1| hypothetical protein [Brassica rapa]
Length = 348
Score = 181 bits (459), Expect = 9e-044
Identities = 91/175 (52%), Positives = 124/175 (70%), Gaps = 1/175 (0%)
Frame = +1
Query: 208 KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 387
+L SG +IK +DA+DLF M+RSRPLPS++DF +L V + ++ +LV+SL ++ME +
Sbjct: 52 RLSSGIADIK-KDDAVDLFQSMIRSRPLPSIIDFSRLFSAVAKTKQYELVLSLCKQMELQ 110
Query: 388 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 567
I IY+ +I+I CFC KL FA S GKI KLG PD VTF+TL++GLC+E RVSEA
Sbjct: 111 GIAHSIYTLSIVINCFCRRRKLGFAFSVLGKILKLGYEPDTVTFSTLVNGLCLEGRVSEA 170
Query: 568 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
+ + +M E RPN+VT TL+NGLC + ++ EA AL+DRM+E G QP Q TYG
Sbjct: 171 VVIVDRMVEMKVRPNLVTLNTLVNGLCLKDQVSEAEALVDRMVEHGCQPDQFTYG 225
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 180 bits (455), Expect = 3e-043
Identities = 86/175 (49%), Positives = 125/175 (71%), Gaps = 1/175 (0%)
Frame = +1
Query: 208 KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 387
+L+SG +IK +DAIDLF DM+ SRPLP+V+DF +L + + ++ DLV++L ++ME K
Sbjct: 157 RLRSGLVDIKA-DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELK 215
Query: 388 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 567
I ++Y+ +I+I CFC C KL A S GKI KLG P+ +TF+TL++GLC+E RVSEA
Sbjct: 216 GIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEA 275
Query: 568 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
L L +M E +P+++T TL+NGLC G+ EA+ L+D+M+E G QP +TYG
Sbjct: 276 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYG 330
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 179 bits (454), Expect = 4e-043
Identities = 87/175 (49%), Positives = 122/175 (69%), Gaps = 1/175 (0%)
Frame = +1
Query: 208 KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 387
+L+SG +IK +DA+DLF +M RSRP P ++DF +L VV R ++ DLV+ L ++ME K
Sbjct: 43 RLRSGIVDIKE-DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELK 101
Query: 388 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 567
I ++Y+ +I+I C C C KL A S GKI KLG PD VTF+TL++GLC+E RVSEA
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 568 LNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYG 732
L L +M E +P ++T L+NGLC G++ +AV L+DRM+E G QP ++TYG
Sbjct: 162 LELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYG 216
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 518,964,482,212
Number of Sequences: 15229318
Number of Extensions: 518964482212
Number of Successful Extensions: 146120587
Number of sequences better than 0.0: 0
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