BLASTX 7.6.2
Query= UN04813 /QuerySize=1438
(1437 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G12470.1 | Symbols: | unknown protein | chr5:... 634 4e-182
TAIR9_protein||AT2G40400.1 | Symbols: | unknown protein | chr2:... 180 2e-045
TAIR9_protein||AT2G40400.2 | Symbols: | unknown protein | chr2:... 180 2e-045
TAIR9_protein||AT3G56140.1 | Symbols: | unknown protein | chr3:... 177 2e-044
TAIR9_protein||AT2G37860.3 | Symbols: LCD1 | LCD1 (LOWER CELL DE... 145 1e-034
TAIR9_protein||AT3G08630.1 | Symbols: | FUNCTIONS IN: molecular... 106 6e-023
TAIR9_protein||AT3G08640.1 | Symbols: | alphavirus core protein... 99 5e-021
>TAIR9_protein||AT5G12470.1 | Symbols: | unknown protein | chr5:4044950-4047290
REVERSE
Length = 387
Score = 634 bits (1635), Expect = 4e-182
Identities = 328/392 (83%), Positives = 354/392 (90%), Gaps = 16/392 (4%)
Frame = -1
Query: 1335 MAIASCFFCVPTPNTSSSISAESNLSRPHLSFSPRLSSSSSF----TVKSISFHRRVTVS 1168
MAIASCFFCVPTPNT+ S ESNL+ PH++ PRLSSSSSF + KSISF+RRV ++
Sbjct: 1 MAIASCFFCVPTPNTAIS---ESNLTWPHIASFPRLSSSSSFNGVISAKSISFNRRVPIT 57
Query: 1167 PLFSSSIDNGGSDNN-------NNGGDGGKNNGDGDGGGGEDRDRNRSEAMMLLAESGTE 1009
P+ S+S NGGSDNN GGDGGKN DGDG G EDRDRNR+EAM+LL ESG E
Sbjct: 58 PVLSASSGNGGSDNNGGGLSGGGGGGDGGKN--DGDGHGDEDRDRNRNEAMLLLKESGIE 115
Query: 1008 LESLPKDLAAAIEAGRIPGSVITRFLELQRSAVMRWLMQFAGFRERLLADDLFLAKLAME 829
LESLPKDLAAAIEAGRIPGSVITRFLELQ+SAVMRWLMQF GFRERLLADDLF+AKLAME
Sbjct: 116 LESLPKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAME 175
Query: 828 CGVGIFTKTAAEYERRRENFFNELEVVFADVVMAIIADFMLVYLPAPTVSLRPPLALSAG 649
CGVGIFTKTAAEYERRRENFFNELEVVFADV MAIIADFMLVYLPAPTVSLRPPLAL+AG
Sbjct: 176 CGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAG 235
Query: 648 GISKFFHNCPDNAFQIAMSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTAVTNAFIKA 469
GISKFFHNCPDNAFQ+A+SGTSY+LLQR GAI RNGAKLFAVGTTSSLVGTA+TNAFIKA
Sbjct: 236 GISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKA 295
Query: 468 KGAVDKTSEGEVETVPILSTSVAYGVYMAVSSNLRYQVLAGVVEQRLLEPMLHQHKLALS 289
+ AVD+ SEGEVETVPI+STSVAYGVYMAVSSNLRYQ++AGV+EQRLLEPMLHQHKLALS
Sbjct: 296 RKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGVIEQRLLEPMLHQHKLALS 355
Query: 288 AMCFAVRTGNTFLGSLLWVDYARLIGIQKSH* 193
A+CFAVRTGNTFLGSLLWVDYARLIGIQKSH*
Sbjct: 356 ALCFAVRTGNTFLGSLLWVDYARLIGIQKSH* 387
>TAIR9_protein||AT2G40400.1 | Symbols: | unknown protein |
chr2:16869363-16872569 FORWARD
Length = 736
Score = 180 bits (456), Expect = 2e-045
Identities = 103/295 (34%), Positives = 166/295 (56%), Gaps = 17/295 (5%)
Frame = -1
Query: 1053 NRSEAMMLLAESGTELESLPKDLAAAIEAGRIPGSVITRFLELQRSAVMRWLMQ-FAGFR 877
+R+E ++ +G ++LP+D+ ++ G + ++ F +L++ ++ L Q F GFR
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469
Query: 876 ERLLADDLFLAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVVMAIIADFMLVYL 697
ERLLAD FL +LA+E + I T A+YE+R+ENFF EL+ V D V A + DF V+L
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529
Query: 696 PAPTVSLRPPLALSAG-----GISKFFHNCPDNAFQIAMSGTSYSLLQRFGAIARNGAKL 532
PAPT+S + G + + PDNAFQ ++ G ++L R ++ G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589
Query: 531 FAVGTTSSLVGTAVTNA------FIKAKGAVDKTSEGEVETVPILSTSVAYGVYMAVSSN 370
VG SS +NA FIK + V + + + P+L T++ YG Y+ SSN
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGE----QAKRSPMLKTALVYGGYLGTSSN 645
Query: 369 LRYQVLAGVVEQRLLEPMLHQHKLALSAMCFAVRTGNTFLGSLLWVDYARLIGIQ 205
+RYQ++AG++E R+ + + Q L ++ + F VR N++ G+ W+D AR G+Q
Sbjct: 646 IRYQIIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699
>TAIR9_protein||AT2G40400.2 | Symbols: | unknown protein |
chr2:16869363-16872569 FORWARD
Length = 736
Score = 180 bits (456), Expect = 2e-045
Identities = 103/295 (34%), Positives = 166/295 (56%), Gaps = 17/295 (5%)
Frame = -1
Query: 1053 NRSEAMMLLAESGTELESLPKDLAAAIEAGRIPGSVITRFLELQRSAVMRWLMQ-FAGFR 877
+R+E ++ +G ++LP+D+ ++ G + ++ F +L++ ++ L Q F GFR
Sbjct: 410 DRAEIARVMNAAGRRRDALPQDIQKGLDLGLVSPEILQNFFDLEQYPLISELTQRFQGFR 469
Query: 876 ERLLADDLFLAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVVMAIIADFMLVYL 697
ERLLAD FL +LA+E + I T A+YE+R+ENFF EL+ V D V A + DF V+L
Sbjct: 470 ERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTVWL 529
Query: 696 PAPTVSLRPPLALSAG-----GISKFFHNCPDNAFQIAMSGTSYSLLQRFGAIARNGAKL 532
PAPT+S + G + + PDNAFQ ++ G ++L R ++ G KL
Sbjct: 530 PAPTLSFISYADETIGPNSIDALRGLLGSIPDNAFQKSLGGQEWTLSLRIASVIIGGLKL 589
Query: 531 FAVGTTSSLVGTAVTNA------FIKAKGAVDKTSEGEVETVPILSTSVAYGVYMAVSSN 370
VG SS +NA FIK + V + + + P+L T++ YG Y+ SSN
Sbjct: 590 AGVGVVSSFAAVGSSNALYAIRKFIKPELGVGE----QAKRSPMLKTALVYGGYLGTSSN 645
Query: 369 LRYQVLAGVVEQRLLEPMLHQHKLALSAMCFAVRTGNTFLGSLLWVDYARLIGIQ 205
+RYQ++AG++E R+ + + Q L ++ + F VR N++ G+ W+D AR G+Q
Sbjct: 646 IRYQIIAGLIEHRISDELSSQ-PLLVNMISFVVRVANSYFGTQQWIDLARSTGLQ 699
>TAIR9_protein||AT3G56140.1 | Symbols: | unknown protein |
chr3:20829407-20832669 FORWARD
Length = 746
Score = 177 bits (448), Expect = 2e-044
Identities = 100/291 (34%), Positives = 164/291 (56%), Gaps = 9/291 (3%)
Frame = -1
Query: 1053 NRSEAMMLLAESGTELESLPKDLAAAIEAGRIPGSVITRFLELQRSAVMRWLMQ-FAGFR 877
+R+E ++ +G ++LP D+ ++ G + V+ +L++ ++ L Q F GFR
Sbjct: 419 DRAEIARVMNAAGRRRDALPPDIQNGLDLGLVSPEVLQNLFDLEQYPLISELTQRFQGFR 478
Query: 876 ERLLADDLFLAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVVMAIIADFMLVYL 697
ERLLAD FL +LA+E + I T A+YE+R+ENFF E++ V D V + DF V+L
Sbjct: 479 ERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTVWL 538
Query: 696 PAPTVSLRPPLALSAG-----GISKFFHNCPDNAFQIAMSGTSYSLLQRFGAIARNGAKL 532
PAPT+S + G + + PDNAFQ +++G ++L R ++ G KL
Sbjct: 539 PAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGLKL 598
Query: 531 FAVGTTSSLVGTAVTNAFIKAKGAV--DKTSEGEVETVPILSTSVAYGVYMAVSSNLRYQ 358
VG SS +NA A+ + + + + P+L T++ YG ++ S+NLRYQ
Sbjct: 599 AGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLRYQ 658
Query: 357 VLAGVVEQRLLEPMLHQHKLALSAMCFAVRTGNTFLGSLLWVDYARLIGIQ 205
++AG++E RL + + Q L ++A+ F VRT N++ G+ W+D AR G+Q
Sbjct: 659 IIAGLIEHRLSDELSSQ-PLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQ 708
>TAIR9_protein||AT2G37860.3 | Symbols: LCD1 | LCD1 (LOWER CELL DENSITY 1) |
chr2:15856952-15858793 FORWARD
Length = 433
Score = 145 bits (364), Expect = 1e-034
Identities = 104/322 (32%), Positives = 164/322 (50%), Gaps = 17/322 (5%)
Frame = -1
Query: 1137 GSDNNNNGGDGGKNNGDGDGGGGEDRDRNRSEAMMLLAESGTELE----SLPKDLAAAIE 970
GSD N GG GG N G+GD G GED + ++ E E E +LP D+ A +
Sbjct: 117 GSDGNGGGGGGG-NGGEGD-GEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAK 174
Query: 969 AGRIPGSVITRFLELQRSAVMRW--LMQFAGFRERLLADDLFLAKLAMECGVGIFTKTAA 796
I ++ R+L+LQ SA + + +A R R+LAD FL K+ E + T A
Sbjct: 175 NYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVA 234
Query: 795 EYERRRENFFNELEVVFADVVMAIIADFMLVYLPAPTVSLRPPLALSAGGISKF---FHN 625
E ++R ++F+ E E+ AD+++ + + LV + AP V P A S G + + ++
Sbjct: 235 EVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSA-SPGFLGRMVFAYNA 293
Query: 624 CPDNAFQIAMSGTSYSLLQRFGAIARNGAKLFAVGTTSSLVGTAVTNAFIKAKGAVDKTS 445
P + F+ G +S QR G AVG +VG + N + AK ++K S
Sbjct: 294 LPSSVFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINK-S 352
Query: 444 EGEVETVPILSTSVAYGVYMAVSSNLRYQVLAGVVEQRLLEPMLHQHKLALSAMCF--AV 271
E + P++ ++ +GV+++VSSN RYQ++ G+ +R++E K +AM F V
Sbjct: 353 EENIPVPPLIKSAALWGVFLSVSSNTRYQIINGL--ERVVEASPFAKKFPPAAMAFTVGV 410
Query: 270 RTGNTFLGSLLWVDYARLIGIQ 205
R N G + +VD+ARL G Q
Sbjct: 411 RLANNIYGGMQFVDWARLSGCQ 432
>TAIR9_protein||AT3G08630.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: alphavirus
core protein family (TAIR:AT3G08640.1); Has 3471 Blast hits to 1913
proteins in 226 species: Archae - 0; Bacteria - 450; Metazoa - 1700;
Fungi - 130; Plants - 787; Viruses - 19; Other Eukaryotes - 385
(source: NCBI BLink). | chr3:2620943-2621962 FORWARD
Length = 340
Score = 106 bits (262), Expect = 6e-023
Identities = 74/230 (32%), Positives = 112/230 (48%), Gaps = 17/230 (7%)
Frame = -1
Query: 885 GFRERLLADDLFLAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVVMAIIADFML 706
G+R R+ AD F K+ ME VG+ + R NEL+ VF+ +V+ I +F L
Sbjct: 104 GWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSILNFTL 163
Query: 705 VYLPAPTVSLRPPLALSAGG---ISKFFHNCPDNAFQIAMSGTSYSLLQRFGAIARNGAK 535
+YL AP+ A+S G + F +CP + +++L+ RFG + G
Sbjct: 164 MYLLAPS-------AISHGSSNLLPGIFRSCPSSHM---FEQGNFTLMNRFGTLVYKGMV 213
Query: 534 LFAVGTTSSLVGTAVTNAFIKAKGAVDKTSEGEVETVPILSTSVAYGVYMAVSSNLRYQV 355
VG + LVGTA++N I + +D + E + P L S+ + +M VS+N+RYQ
Sbjct: 214 FATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQT 273
Query: 354 LAGVVEQRLLEPMLHQHKLALSAMCFAVRTGNTFLGSLLWVDYARLIGIQ 205
L G + LLE L L A+R N LG + +V AR+ G Q
Sbjct: 274 LNGA--EFLLEKSL--PPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQ 319
>TAIR9_protein||AT3G08640.1 | Symbols: | alphavirus core protein family |
chr3:2622992-2624005 FORWARD
Length = 338
Score = 99 bits (246), Expect = 5e-021
Identities = 69/227 (30%), Positives = 111/227 (48%), Gaps = 11/227 (4%)
Frame = -1
Query: 885 GFRERLLADDLFLAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVVMAIIADFML 706
G+R R+ AD F K+ ME VG+ + R NEL+ VF+ +V+ I +F+L
Sbjct: 107 GWRSRVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVL 166
Query: 705 VYLPAPTVSLRPPLALSAGGISKFFHNCPDNAFQIAMSGTSYSLLQRFGAIARNGAKLFA 526
+Y+ APT + S+ + F NCP + S++++ RFG + G +
Sbjct: 167 MYMLAPTAATLG----SSQTLPGIFRNCPSSHM---FEQGSFTVMNRFGTLVYKGMVFAS 219
Query: 525 VGTTSSLVGTAVTNAFIKAKGAVDKTSEGEVETVPILSTSVAYGVYMAVSSNLRYQVLAG 346
VG + LVGTA++N I + +D + E + P + S+ + +M VS+N RYQ L G
Sbjct: 220 VGLAAGLVGTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNG 279
Query: 345 VVEQRLLEPMLHQHKLALSAMCFAVRTGNTFLGSLLWVDYARLIGIQ 205
+ + LL +L L +R N G + +V AR+ G Q
Sbjct: 280 I--EFLLAKVL--PPLVFKTSVIVLRCANNVAGGMSFVLLARMTGSQ 322
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,140,013,067
Number of Sequences: 33410
Number of Extensions: 3140013067
Number of Successful Extensions: 116423344
Number of sequences better than 0.0: 0
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