BLASTX 7.6.2
Query= UN04882 /QuerySize=1445
(1444 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297852480|ref|XP_002894121.1| hypothetical protein ARALYDRAFT... 214 3e-053
gi|12321596|gb|AAG50847.1|AC074308_3 hypothetical protein, 3' pa... 206 7e-051
gi|8778700|gb|AAF79708.1|AC020889_16 T1N15.25 [Arabidopsis thali... 206 7e-051
gi|15221913|ref|NP_175295.1| high mobility group A5 [Arabidopsis... 206 7e-051
gi|297852586|ref|XP_002894174.1| predicted protein [Arabidopsis ... 198 3e-048
gi|297834712|ref|XP_002885238.1| hypothetical protein ARALYDRAFT... 133 1e-028
gi|42564980|ref|NP_188431.3| DNA-binding protein HMR1-like prote... 116 2e-023
>gi|297852480|ref|XP_002894121.1| hypothetical protein ARALYDRAFT_474000
[Arabidopsis lyrata subsp. lyrata]
Length = 473
Score = 214 bits (544), Expect = 3e-053
Identities = 127/199 (63%), Positives = 146/199 (73%), Gaps = 25/199 (12%)
Frame = +3
Query: 3 VLVMVKKSYRLAASAPP-SAAAAAALEPPRSDFNNRVNDTQQQLPPPPTSAPPQTQTPQT 179
+L+MVKKSY+LAA+ PP S AA+ LEPPRSDF + + Q LP P ++ + TPQT
Sbjct: 129 ILMMVKKSYKLAATPPPTSVDAASGLEPPRSDF---IVNENQPLPDPGLAS---STTPQT 182
Query: 180 QKRGRGRPPKAKP---AADVQTNGQSSYGQIELPVPRPEEQQMQLQLQAPPPQPQPS-KR 347
KRGRGRPPK KP +QTNG+ ++ Q ELPV RPEE ++Q PQPQP+ KR
Sbjct: 183 LKRGRGRPPKTKPDVVQPQLQTNGKPTWEQSELPVSRPEEIKIQ-------PQPQPTVKR 235
Query: 348 PPGRPRKDGASPTPMTVKAAAPVVSGGEEIAKRRGRPPSGRAAGRQRKPALVSAPASVFP 527
PPGRPRKDGASP TVKAAA VSGG E KRRGRPPSGRA GR+RKP +VSAPASVFP
Sbjct: 236 PPGRPRKDGASP---TVKAAAS-VSGGVESVKRRGRPPSGRAVGRERKPIVVSAPASVFP 291
Query: 528 YVANGGGGGVRRRGRPKRV 584
YVAN GGVRRRGRPKRV
Sbjct: 292 YVAN---GGVRRRGRPKRV 307
Score = 185 bits (468), Expect = 2e-044
Identities = 101/150 (67%), Positives = 112/150 (74%), Gaps = 6/150 (4%)
Frame = +1
Query: 622 AVGGGGEL-VAKRGRGRPPKIGGVIRKAMKPKRGYSRTGRPVGRPRKNVASKGACGQQDI 798
A GG E+ V KRGRGRPPKIGGVIRK MKP R ++RTGRP+GRPRKN S GA G+QD
Sbjct: 325 AESGGEEVAVKKRGRGRPPKIGGVIRKPMKPMRSFARTGRPLGRPRKNAVSVGASGRQDG 384
Query: 799 SYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEELTVTKREATEEPGHVQ 978
YGELKKKFELFQ +AK+IV VLK+E+GGS NQAVVQAI DLE LT T E + +Q
Sbjct: 385 DYGELKKKFELFQARAKDIVIVLKSEIGGSGNQAVVQAIQDLEGLTETTNEPQQHMPELQ 444
Query: 979 -PDEHHFENEPQPEGHGYGQVQTETEAMQE 1065
PDE H E EPQPEG G QTE EAMQE
Sbjct: 445 LPDEEHPETEPQPEGQG----QTEAEAMQE 470
>gi|12321596|gb|AAG50847.1|AC074308_3 hypothetical protein, 3' partial
[Arabidopsis thaliana]
Length = 332
Score = 206 bits (524), Expect = 7e-051
Identities = 124/199 (62%), Positives = 140/199 (70%), Gaps = 20/199 (10%)
Frame = +3
Query: 3 VLVMVKKSYRLAAS--APPSAAAAAALEPPRSDFNNRVNDTQQQLPPPPTSAPPQTQTPQ 176
+LVMVKKSY+LA++ PP + A +LEPPRSDF + + Q LP P + + TPQ
Sbjct: 131 ILVMVKKSYKLASTPPPPPPTSVAPSLEPPRSDF---IVNENQPLPDPVLA----SSTPQ 183
Query: 177 TQKRGRGRPPKAKP---AADVQTNGQSSYGQIELPVPRPEEQQMQLQLQAPPPQPQPSKR 347
T KRGRGRPPKAKP TNG+ ++ Q ELPV RPEE Q+Q Q P QP KR
Sbjct: 184 TIKRGRGRPPKAKPDVVQPQPLTNGKLTWEQSELPVSRPEEIQIQ-PPQLPLQPQQPVKR 242
Query: 348 PPGRPRKDGASPTPMTVKAAAPVVSGGEEIAKRRGRPPSGRAAGRQRKPALVSAPASVFP 527
PPGRPRKDG SP TVK AA VSGG E KRRGRPPSGRAAGR+RKP +VSAPASVFP
Sbjct: 243 PPGRPRKDGTSP---TVKPAAS-VSGGVETVKRRGRPPSGRAAGRERKPIVVSAPASVFP 298
Query: 528 YVANGGGGGVRRRGRPKRV 584
YVAN GGVRRRGRPKRV
Sbjct: 299 YVAN---GGVRRRGRPKRV 314
>gi|8778700|gb|AAF79708.1|AC020889_16 T1N15.25 [Arabidopsis thaliana]
Length = 594
Score = 206 bits (524), Expect = 7e-051
Identities = 124/199 (62%), Positives = 140/199 (70%), Gaps = 20/199 (10%)
Frame = +3
Query: 3 VLVMVKKSYRLAAS--APPSAAAAAALEPPRSDFNNRVNDTQQQLPPPPTSAPPQTQTPQ 176
+LVMVKKSY+LA++ PP + A +LEPPRSDF + + Q LP P + + TPQ
Sbjct: 246 ILVMVKKSYKLASTPPPPPPTSVAPSLEPPRSDF---IVNENQPLPDPVLA----SSTPQ 298
Query: 177 TQKRGRGRPPKAKP---AADVQTNGQSSYGQIELPVPRPEEQQMQLQLQAPPPQPQPSKR 347
T KRGRGRPPKAKP TNG+ ++ Q ELPV RPEE Q+Q Q P QP KR
Sbjct: 299 TIKRGRGRPPKAKPDVVQPQPLTNGKLTWEQSELPVSRPEEIQIQ-PPQLPLQPQQPVKR 357
Query: 348 PPGRPRKDGASPTPMTVKAAAPVVSGGEEIAKRRGRPPSGRAAGRQRKPALVSAPASVFP 527
PPGRPRKDG SP TVK AA VSGG E KRRGRPPSGRAAGR+RKP +VSAPASVFP
Sbjct: 358 PPGRPRKDGTSP---TVKPAAS-VSGGVETVKRRGRPPSGRAAGRERKPIVVSAPASVFP 413
Query: 528 YVANGGGGGVRRRGRPKRV 584
YVAN GGVRRRGRPKRV
Sbjct: 414 YVAN---GGVRRRGRPKRV 429
Score = 182 bits (460), Expect = 2e-043
Identities = 100/153 (65%), Positives = 112/153 (73%), Gaps = 14/153 (9%)
Frame = +1
Query: 625 VGGGGELVA--KRGRGRPPKIGGVIRKAMKPKRGYSRTGRPVGRPRKNVASKGACGQQDI 798
V GGE VA KRGRGRPPKIGGVIRK MKP R ++RTG+PVGRPRKN S GA G+QD
Sbjct: 447 VESGGEEVAVKKRGRGRPPKIGGVIRKPMKPMRSFARTGKPVGRPRKNAVSVGASGRQDG 506
Query: 799 SYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEELTVTKREATEEPGHVQ 978
YGELKKKFELFQ +AK+IV VLK+E+GGS NQAVVQAI DLE + E T EP H++
Sbjct: 507 DYGELKKKFELFQARAKDIVIVLKSEIGGSGNQAVVQAIQDLEGIA----ETTNEPKHME 562
Query: 979 ----PDEHHFENEPQPEGHGYGQVQTETEAMQE 1065
PDE H E EP+ EG G QTE EAMQE
Sbjct: 563 EVQLPDEEHLETEPEAEGQG----QTEAEAMQE 591
>gi|15221913|ref|NP_175295.1| high mobility group A5 [Arabidopsis thaliana]
Length = 479
Score = 206 bits (524), Expect = 7e-051
Identities = 124/199 (62%), Positives = 140/199 (70%), Gaps = 20/199 (10%)
Frame = +3
Query: 3 VLVMVKKSYRLAAS--APPSAAAAAALEPPRSDFNNRVNDTQQQLPPPPTSAPPQTQTPQ 176
+LVMVKKSY+LA++ PP + A +LEPPRSDF + + Q LP P + + TPQ
Sbjct: 131 ILVMVKKSYKLASTPPPPPPTSVAPSLEPPRSDF---IVNENQPLPDPVLA----SSTPQ 183
Query: 177 TQKRGRGRPPKAKP---AADVQTNGQSSYGQIELPVPRPEEQQMQLQLQAPPPQPQPSKR 347
T KRGRGRPPKAKP TNG+ ++ Q ELPV RPEE Q+Q Q P QP KR
Sbjct: 184 TIKRGRGRPPKAKPDVVQPQPLTNGKLTWEQSELPVSRPEEIQIQ-PPQLPLQPQQPVKR 242
Query: 348 PPGRPRKDGASPTPMTVKAAAPVVSGGEEIAKRRGRPPSGRAAGRQRKPALVSAPASVFP 527
PPGRPRKDG SP TVK AA VSGG E KRRGRPPSGRAAGR+RKP +VSAPASVFP
Sbjct: 243 PPGRPRKDGTSP---TVKPAAS-VSGGVETVKRRGRPPSGRAAGRERKPIVVSAPASVFP 298
Query: 528 YVANGGGGGVRRRGRPKRV 584
YVAN GGVRRRGRPKRV
Sbjct: 299 YVAN---GGVRRRGRPKRV 314
Score = 182 bits (460), Expect = 2e-043
Identities = 100/153 (65%), Positives = 112/153 (73%), Gaps = 14/153 (9%)
Frame = +1
Query: 625 VGGGGELVA--KRGRGRPPKIGGVIRKAMKPKRGYSRTGRPVGRPRKNVASKGACGQQDI 798
V GGE VA KRGRGRPPKIGGVIRK MKP R ++RTG+PVGRPRKN S GA G+QD
Sbjct: 332 VESGGEEVAVKKRGRGRPPKIGGVIRKPMKPMRSFARTGKPVGRPRKNAVSVGASGRQDG 391
Query: 799 SYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEELTVTKREATEEPGHVQ 978
YGELKKKFELFQ +AK+IV VLK+E+GGS NQAVVQAI DLE + E T EP H++
Sbjct: 392 DYGELKKKFELFQARAKDIVIVLKSEIGGSGNQAVVQAIQDLEGIA----ETTNEPKHME 447
Query: 979 ----PDEHHFENEPQPEGHGYGQVQTETEAMQE 1065
PDE H E EP+ EG G QTE EAMQE
Sbjct: 448 EVQLPDEEHLETEPEAEGQG----QTEAEAMQE 476
>gi|297852586|ref|XP_002894174.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 198 bits (502), Expect = 3e-048
Identities = 104/155 (67%), Positives = 115/155 (74%), Gaps = 6/155 (3%)
Frame = +1
Query: 628 GGGGELVAKRGRGRPPKIGGVIRKAMKPKRGYSRTGRPVGRPRKNVASKGACGQQDISYG 807
GG V KRGRGRPPKIGGVIRK MKPKR ++RTGRPVGRPRKN S A GQQD YG
Sbjct: 183 GGEEAAVKKRGRGRPPKIGGVIRKPMKPKRSFTRTGRPVGRPRKNAVSMRASGQQDGDYG 242
Query: 808 ELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEELTVTKREATEEPGHVQ--- 978
ELKKK ELFQ +AK+IV VLKAE+GG+ NQAVVQAI DLE T T E T +P H++
Sbjct: 243 ELKKKLELFQARAKDIVTVLKAEIGGTENQAVVQAIQDLEGTTGTTTETTNKPQHMEEVQ 302
Query: 979 -PDEHHFENEPQP--EGHGYGQVQTETEAMQEALF 1074
PDE H E EP+P +G G GQ QTE EAMQEALF
Sbjct: 303 LPDEEHPETEPEPVGQGQGQGQTQTEAEAMQEALF 337
Score = 146 bits (368), Expect = 9e-033
Identities = 85/132 (64%), Positives = 96/132 (72%), Gaps = 17/132 (12%)
Frame = +3
Query: 204 PKAKPAA--DVQTNGQSSYGQIELPVPRPEEQ---QMQLQLQAPPPQPQPSKRPPGRPRK 368
PK KP QTNG+ ++ Q ELPV +P+++ Q Q Q+ QP P KRPPGRPRK
Sbjct: 45 PKPKPEVQPQPQTNGKPTWEQSELPVSQPQDEIHPQPQAQI-----QPPPIKRPPGRPRK 99
Query: 369 DGASPTPMTVKAAAPVVSGGEEIAKRRGRPPSGRAAGRQRKPALVSAPASVFPYVANGGG 548
DGA P TVK AA VSGG EI KRRGRPPSGRAAGR+RKP ++SAPASVFPYVAN
Sbjct: 100 DGALP---TVKTAAS-VSGGVEIVKRRGRPPSGRAAGRERKPTVISAPASVFPYVAN--- 152
Query: 549 GGVRRRGRPKRV 584
GGVRRRGRPKRV
Sbjct: 153 GGVRRRGRPKRV 164
>gi|297834712|ref|XP_002885238.1| hypothetical protein ARALYDRAFT_479291
[Arabidopsis lyrata subsp. lyrata]
Length = 480
Score = 133 bits (333), Expect = 1e-028
Identities = 91/166 (54%), Positives = 99/166 (59%), Gaps = 26/166 (15%)
Frame = +1
Query: 634 GGELVA------KRGRGRPPKIGGVIRKAMKPKRGYSRTGRPVGRPRKNVASKGACGQQD 795
GGE VA KRGRGRPPKIGGVI + MKPKRG GRPVGRPRK A+ G QD
Sbjct: 322 GGENVAAVAPGMKRGRGRPPKIGGVISRLMKPKRG---RGRPVGRPRK-FATSVTTGAQD 377
Query: 796 ISYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEELTVTKREATEEPGHV 975
GELKKKF++FQEK KEIV VLK V S NQAVVQAI DLE LTVT+ + V
Sbjct: 378 --SGELKKKFDIFQEKVKEIVKVLKDGV-TSENQAVVQAIKDLEALTVTETVVEPQVEEV 434
Query: 976 QPDE-------------HHFENEPQPEGHGYGQVQTETEAMQEALF 1074
P+E + E Q G Q QTE EAMQEALF
Sbjct: 435 PPEETAEPLTEAEAAETQGGQEEGQEREGGEAQTQTEAEAMQEALF 480
Score = 118 bits (295), Expect = 3e-024
Identities = 73/145 (50%), Positives = 89/145 (61%), Gaps = 10/145 (6%)
Frame = +3
Query: 153 PPQTQTPQTQKRGRGRPPKAKPAADVQTNGQSSYGQIEL-PVPRPEEQQMQLQLQAPPPQ 329
P Q KRGRGRPPK KP Q + Q++ P + QQ+QL + P P
Sbjct: 174 PMAVSASQPLKRGRGRPPKPKPEGQQQQPINAQPIQVQSNGQPIWQLQQVQLPVTVPVPV 233
Query: 330 PQPSKRPPGRPRKDGASPTPMTVKAAAPVVSGGEEIAKRRGRPPSGRAAGRQRKPALVSA 509
+ +KR PGRPRK+GA+ V+A+ V++G I KRRGRPP RAAGRQRKP VSA
Sbjct: 234 TESAKRGPGRPRKNGAAAVAPIVQAS--VMAG---IMKRRGRPPGRRAAGRQRKPKSVSA 288
Query: 510 PASVFPYVANGGGGGVRRRGRPKRV 584
ASV+PYVAN G RRRGRP+RV
Sbjct: 289 TASVYPYVAN----GARRRGRPRRV 309
>gi|42564980|ref|NP_188431.3| DNA-binding protein HMR1-like protein [Arabidopsis
thaliana]
Length = 480
Score = 116 bits (288), Expect = 2e-023
Identities = 70/139 (50%), Positives = 86/139 (61%), Gaps = 9/139 (6%)
Frame = +3
Query: 174 QTQKRGRGRPPKAKPAADVQTNGQ-SSYGQIEL-PVPRPEEQQMQLQLQAPPPQPQPSKR 347
Q KRGRGRPPK KP + Q Q Q++ P E+QQ+Q + P P + +KR
Sbjct: 175 QPLKRGRGRPPKPKPESQPQPLQQLPPTNQVQANGQPIWEQQQVQSPVPVPTPVTESAKR 234
Query: 348 PPGRPRKDGASPTPMTVKAAAPVVSGGEEIAKRRGRPPSGRAAGRQRKPALVSAPASVFP 527
PGRPRK+G++ A V++G I KRRGRPP RAAGRQRKP VS+ ASV+P
Sbjct: 235 GPGRPRKNGSAAPATAPIVQASVMAG---IMKRRGRPPGRRAAGRQRKPKSVSSTASVYP 291
Query: 528 YVANGGGGGVRRRGRPKRV 584
YVAN G RRRGRP+RV
Sbjct: 292 YVAN----GARRRGRPRRV 306
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 547,717,964,704
Number of Sequences: 15229318
Number of Extensions: 547717964704
Number of Successful Extensions: 163575889
Number of sequences better than 0.0: 0
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