BLASTX 7.6.2
Query= UN04882 /QuerySize=1445
(1444 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility... 206 3e-053
TAIR9_protein||AT3G18035.1 | Symbols: HON4 | HON4; DNA binding |... 128 9e-030
>TAIR9_protein||AT1G48620.1 | Symbols: HON5 | HON5 (High Mobility Group Family A
5); DNA binding | chr1:17974148-17976301 REVERSE
Length = 480
Score = 206 bits (524), Expect = 3e-053
Identities = 124/199 (62%), Positives = 140/199 (70%), Gaps = 20/199 (10%)
Frame = +3
Query: 3 VLVMVKKSYRLAAS--APPSAAAAAALEPPRSDFNNRVNDTQQQLPPPPTSAPPQTQTPQ 176
+LVMVKKSY+LA++ PP + A +LEPPRSDF + + Q LP P + + TPQ
Sbjct: 131 ILVMVKKSYKLASTPPPPPPTSVAPSLEPPRSDF---IVNENQPLPDPVLA----SSTPQ 183
Query: 177 TQKRGRGRPPKAKP---AADVQTNGQSSYGQIELPVPRPEEQQMQLQLQAPPPQPQPSKR 347
T KRGRGRPPKAKP TNG+ ++ Q ELPV RPEE Q+Q Q P QP KR
Sbjct: 184 TIKRGRGRPPKAKPDVVQPQPLTNGKLTWEQSELPVSRPEEIQIQ-PPQLPLQPQQPVKR 242
Query: 348 PPGRPRKDGASPTPMTVKAAAPVVSGGEEIAKRRGRPPSGRAAGRQRKPALVSAPASVFP 527
PPGRPRKDG SP TVK AA VSGG E KRRGRPPSGRAAGR+RKP +VSAPASVFP
Sbjct: 243 PPGRPRKDGTSP---TVKPAAS-VSGGVETVKRRGRPPSGRAAGRERKPIVVSAPASVFP 298
Query: 528 YVANGGGGGVRRRGRPKRV 584
YVAN GGVRRRGRPKRV
Sbjct: 299 YVAN---GGVRRRGRPKRV 314
Score = 188 bits (475), Expect = 1e-047
Identities = 103/157 (65%), Positives = 115/157 (73%), Gaps = 14/157 (8%)
Frame = +1
Query: 625 VGGGGELVA--KRGRGRPPKIGGVIRKAMKPKRGYSRTGRPVGRPRKNVASKGACGQQDI 798
V GGE VA KRGRGRPPKIGGVIRK MKP R ++RTG+PVGRPRKN S GA G+QD
Sbjct: 332 VESGGEEVAVKKRGRGRPPKIGGVIRKPMKPMRSFARTGKPVGRPRKNAVSVGASGRQDG 391
Query: 799 SYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEELTVTKREATEEPGHVQ 978
YGELKKKFELFQ +AK+IV VLK+E+GGS NQAVVQAI DLE + E T EP H++
Sbjct: 392 DYGELKKKFELFQARAKDIVIVLKSEIGGSGNQAVVQAIQDLEGIA----ETTNEPKHME 447
Query: 979 ----PDEHHFENEPQPEGHGYGQVQTETEAMQEALF* 1077
PDE H E EP+ EG G QTE EAMQEALF*
Sbjct: 448 EVQLPDEEHLETEPEAEGQG----QTEAEAMQEALF* 480
>TAIR9_protein||AT3G18035.1 | Symbols: HON4 | HON4; DNA binding |
chr3:6169384-6171558 REVERSE
Length = 481
Score = 128 bits (321), Expect = 9e-030
Identities = 92/170 (54%), Positives = 99/170 (58%), Gaps = 29/170 (17%)
Frame = +1
Query: 634 GGELVA------KRGRGRPPKIGGVI-RKAMKPKRGYSRTGRPVGRPRKNVASKGACGQQ 792
GGE VA KRGRGRPPKIGGVI R MKPKRG GRPVGRPRK + + G Q
Sbjct: 319 GGENVAAVAPGMKRGRGRPPKIGGVISRLIMKPKRG---RGRPVGRPRK-IGTSVTTGTQ 374
Query: 793 DISYGELKKKFELFQEKAKEIVNVLKAEVGGSYNQAVVQAIHDLEELTVTKREATEEPGH 972
D GELKKKF++FQEK KEIV VLK V S NQAVVQAI DLE LTVT+ +
Sbjct: 375 D--SGELKKKFDIFQEKVKEIVKVLKDGV-TSENQAVVQAIKDLEALTVTETVEPQVMEE 431
Query: 973 VQPD---------------EHHFENEPQPEGHGYGQVQTETEAMQEALF* 1077
VQP+ E E E G Q QTE EAMQEALF*
Sbjct: 432 VQPEETAAPQTEAQQTEAAETQGGQEEGQEREGETQTQTEAEAMQEALF* 481
Score = 118 bits (295), Expect = 1e-026
Identities = 72/144 (50%), Positives = 87/144 (60%), Gaps = 19/144 (13%)
Frame = +3
Query: 174 QTQKRGRGRPPKAKPAADVQ-------TNGQSSYGQIELPVPRPEEQQMQLQLQAPPPQP 332
Q KRGRGRPPK KP + Q TN + GQ P E+QQ+Q + P P
Sbjct: 175 QPLKRGRGRPPKPKPESQPQPLQQLPPTNQVQANGQ-----PIWEQQQVQSPVPVPTPVT 229
Query: 333 QPSKRPPGRPRKDGASPTPMTVKAAAPVVSGGEEIAKRRGRPPSGRAAGRQRKPALVSAP 512
+ +KR PGRPRK+G++ A V++G I KRRGRPP RAAGRQRKP VS+
Sbjct: 230 ESAKRGPGRPRKNGSAAPATAPIVQASVMAG---IMKRRGRPPGRRAAGRQRKPKSVSST 286
Query: 513 ASVFPYVANGGGGGVRRRGRPKRV 584
ASV+PYVAN G RRRGRP+RV
Sbjct: 287 ASVYPYVAN----GARRRGRPRRV 306
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,140,013,067
Number of Sequences: 33410
Number of Extensions: 3140013067
Number of Successful Extensions: 116423344
Number of sequences better than 0.0: 0
|
