BLASTX 7.6.2
Query= UN05097 /QuerySize=730
(729 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S... 253 1e-067
TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S... 253 1e-067
TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S... 252 2e-067
TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S... 252 2e-067
TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S... 252 2e-067
>TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 253 bits (644), Expect = 1e-067
Identities = 129/146 (88%), Positives = 136/146 (93%), Gaps = 2/146 (1%)
Frame = +3
Query: 102 MSGEEAAPVVV-PPVAEPAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRV 278
MSG+EAAPVVV PPVAEPAA IPEDMDL+TALELTLRKARA+GGVVRGLHE AKLIEKRV
Sbjct: 1 MSGDEAAPVVVPPPVAEPAA-IPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRV 59
Query: 279 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 458
AQL VLAEDCNQPDYVKLVKALCADH + LLTVPSAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 459 SCLVVKDYGEDTTALNIVKKHIESN* 536
SCLVVKD+GE+TTAL+IV KHI S *
Sbjct: 120 SCLVVKDFGEETTALSIVNKHIASQ* 145
>TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 253 bits (644), Expect = 1e-067
Identities = 129/146 (88%), Positives = 136/146 (93%), Gaps = 2/146 (1%)
Frame = +3
Query: 102 MSGEEAAPVVV-PPVAEPAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRV 278
MSG+EAAPVVV PPVAEPAA IPEDMDL+TALELTLRKARA+GGVVRGLHE AKLIEKRV
Sbjct: 1 MSGDEAAPVVVPPPVAEPAA-IPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRV 59
Query: 279 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 458
AQL VLAEDCNQPDYVKLVKALCADH + LLTVPSAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 459 SCLVVKDYGEDTTALNIVKKHIESN* 536
SCLVVKD+GE+TTAL+IV KHI S *
Sbjct: 120 SCLVVKDFGEETTALSIVNKHIASQ* 145
>TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 252 bits (643), Expect = 2e-067
Identities = 128/146 (87%), Positives = 138/146 (94%), Gaps = 2/146 (1%)
Frame = +3
Query: 102 MSGEEA-APVVVPPVAEPAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRV 278
MSG+EA A VVPPVAE AAVIPEDMD+ TALELT+RK+RA+GGVVRGLHESAKLIEKR
Sbjct: 1 MSGDEAVAAPVVPPVAE-AAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRN 59
Query: 279 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 458
AQLCVLAEDCNQPDYVKLVKALCADHSI LLTVPSAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 459 SCLVVKDYGEDTTALNIVKKHIESN* 536
SCLV+KD+GE+TTALNIVKKH++SN*
Sbjct: 120 SCLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 252 bits (643), Expect = 2e-067
Identities = 128/146 (87%), Positives = 138/146 (94%), Gaps = 2/146 (1%)
Frame = +3
Query: 102 MSGEEA-APVVVPPVAEPAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRV 278
MSG+EA A VVPPVAE AAVIPEDMD+ TALELT+RK+RA+GGVVRGLHESAKLIEKR
Sbjct: 1 MSGDEAVAAPVVPPVAE-AAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRN 59
Query: 279 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 458
AQLCVLAEDCNQPDYVKLVKALCADHSI LLTVPSAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 459 SCLVVKDYGEDTTALNIVKKHIESN* 536
SCLV+KD+GE+TTALNIVKKH++SN*
Sbjct: 120 SCLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 252 bits (643), Expect = 2e-067
Identities = 128/146 (87%), Positives = 138/146 (94%), Gaps = 2/146 (1%)
Frame = +3
Query: 102 MSGEEA-APVVVPPVAEPAAVIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRV 278
MSG+EA A VVPPVAE AAVIPEDMD+ TALELT+RK+RA+GGVVRGLHESAKLIEKR
Sbjct: 1 MSGDEAVAAPVVPPVAE-AAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRN 59
Query: 279 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 458
AQLCVLAEDCNQPDYVKLVKALCADHSI LLTVPSAKTLGEWAGLCKIDSEGNARKVVGC
Sbjct: 60 AQLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGC 119
Query: 459 SCLVVKDYGEDTTALNIVKKHIESN* 536
SCLV+KD+GE+TTALNIVKKH++SN*
Sbjct: 120 SCLVIKDFGEETTALNIVKKHLDSN* 145
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,226,719,709
Number of Sequences: 33410
Number of Extensions: 3226719709
Number of Successful Extensions: 116483219
Number of sequences better than 0.0: 0
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