BLASTX 7.6.2
Query= UN05350 /QuerySize=1454
(1453 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [A... 464 3e-128
gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis ... 423 6e-116
gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [A... 421 2e-115
gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein... 396 7e-108
gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabid... 395 1e-107
gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-b... 392 9e-107
gi|255639113|gb|ACU19856.1| unknown [Glycine max] 365 1e-098
gi|225462109|ref|XP_002277842.1| PREDICTED: hypothetical protein... 358 2e-096
gi|224056565|ref|XP_002298913.1| predicted protein [Populus tric... 351 3e-094
gi|224114547|ref|XP_002316790.1| predicted protein [Populus tric... 343 7e-092
gi|255578158|ref|XP_002529948.1| RNA-binding protein, putative [... 341 2e-091
gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrel... 335 1e-089
gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrel... 334 2e-089
gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [... 334 2e-089
gi|116781618|gb|ABK22180.1| unknown [Picea sitchensis] 331 2e-088
gi|302769672|ref|XP_002968255.1| hypothetical protein SELMODRAFT... 331 2e-088
gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [... 329 1e-087
gi|224118386|ref|XP_002317806.1| predicted protein [Populus tric... 328 2e-087
gi|302788706|ref|XP_002976122.1| hypothetical protein SELMODRAFT... 328 2e-087
gi|225426552|ref|XP_002272303.1| PREDICTED: hypothetical protein... 327 3e-087
>gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [Arabidopsis
thaliana]
Length = 314
Score = 464 bits (1192), Expect = 3e-128
Identities = 250/304 (82%), Positives = 262/304 (86%), Gaps = 17/304 (5%)
Frame = +1
Query: 319 DGIEKSLVTDSKPESES-DLKPKSKPEPGVDQMKKLA-----LNPEAK*FFPSYKKKNDQ 480
DGIEKS TDSKPE ES DLKPKSKPE DQMKKL LNPEAK FFPSYK+ +Q
Sbjct: 22 DGIEKS--TDSKPEIESDDLKPKSKPE--YDQMKKLVAMFKKLNPEAKEFFPSYKRNTNQ 77
Query: 481 SLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVRLTGRGSKAQREDSIRRTV 660
S+DF A K SGE DNKK RR RNNYNQGR+VRL GR SKAQREDSIRRTV
Sbjct: 78 ---SDDFVIAIKPSGE----DNKKVAINRRRRNNYNQGRRVRLPGRASKAQREDSIRRTV 130
Query: 661 YVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTM 840
YVSDIDQSVTEE LAGLFSS GQVVDCRICGDP+SVLRFAFVEFSDD GAR+ALS+GGTM
Sbjct: 131 YVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTM 190
Query: 841 IGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACG 1020
IGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDV TFF+SACG
Sbjct: 191 IGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACG 250
Query: 1021 EVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRS 1200
EVTR+RLLGDQ+HSTRIAFVEFAMAESAV ALNCSG+VLGSQPIRVSPSKTPVR R +RS
Sbjct: 251 EVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310
Query: 1201 PSSN 1212
PS N
Sbjct: 311 PSPN 314
>gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 769
Score = 423 bits (1085), Expect = 6e-116
Identities = 216/256 (84%), Positives = 231/256 (90%), Gaps = 4/256 (1%)
Frame = +1
Query: 427 LNPEAK*FFPSYKKKNDQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVR 606
LNPEAK FFPSYKK +QSLSS+DF AKK SGE DNKKDG RR RNNYNQGR+VR
Sbjct: 5 LNPEAKEFFPSYKKNTNQSLSSDDFVIAKKPSGE----DNKKDGINRRRRNNYNQGRRVR 60
Query: 607 LTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFV 786
L GR SKAQRE SIRRTVYVSDIDQSVTEEVLAGLFSS GQVVDCRICGDP+SVLRFAFV
Sbjct: 61 LPGRASKAQREVSIRRTVYVSDIDQSVTEEVLAGLFSSCGQVVDCRICGDPNSVLRFAFV 120
Query: 787 EFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNV 966
EFSDD GARAALS+GGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMC+RTIYCTNV
Sbjct: 121 EFSDDQGARAALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTNV 180
Query: 967 DKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQ 1146
DKNATED V+TFF+SACGEVTR+RLLGDQ+HSTRIAFVEFAMAESAV ALNCSG+VLGSQ
Sbjct: 181 DKNATEDVVKTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGSQ 240
Query: 1147 PIRVSPSKTPVRPRFS 1194
PIR+S ++ + RFS
Sbjct: 241 PIRLSQMRSALGRRFS 256
>gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis
thaliana]
Length = 327
Score = 421 bits (1080), Expect = 2e-115
Identities = 224/309 (72%), Positives = 253/309 (81%), Gaps = 16/309 (5%)
Frame = +1
Query: 310 LVTDGIEKSLVTDSKPESESDLKPKSKPEPGVDQMKKLALNPEAK*FFPSY---KKKN-- 474
++ +GIEKS +TDSK E+ES L V KK LNP AK FFPSY KK N
Sbjct: 27 IIDEGIEKSSITDSKTETESRLDMHKL----VAMFKK--LNPLAKEFFPSYYDPKKNNQV 80
Query: 475 ---DQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVRLTGRGSKAQREDS 645
+Q L ++DF T KK SGE+ D KKD N R+ R NY+QGR+ RLTGR SKAQREDS
Sbjct: 81 AKANQFLPADDFETTKKQSGEEFDLDAKKDDNTRK-RRNYSQGRR-RLTGRISKAQREDS 138
Query: 646 IRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALS 825
IRRTVYVSDIDQSVTEE LAGLFS+ GQVVDCRICGDPHSVLRFAFVEF+DD GA ALS
Sbjct: 139 IRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALS 198
Query: 826 VGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFF 1005
+GGTM+G+YPVRVLPSKTAILPVNPTFLPRSEDEREMC+RTIYCTN+DK ++ DVR FF
Sbjct: 199 LGGTMLGFYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFF 258
Query: 1006 ESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRP 1185
ESACGEVTR+RLLGDQLHSTRIAFVEFA+A+SA+ ALNCSG+V+GSQPIRVSPSKTPVRP
Sbjct: 259 ESACGEVTRLRLLGDQLHSTRIAFVEFALADSALSALNCSGMVVGSQPIRVSPSKTPVRP 318
Query: 1186 RFSRSPSSN 1212
R +R PS+N
Sbjct: 319 RITRPPSTN 327
>gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein [Arabidopsis
thaliana]
Length = 308
Score = 396 bits (1016), Expect = 7e-108
Identities = 215/311 (69%), Positives = 243/311 (78%), Gaps = 11/311 (3%)
Frame = +1
Query: 298 SVHDLVTDGIEKSLVTDSKPESESDLKPKSKPEPGVDQMKKLALNPE---AK*FFPSYKK 468
++ ++ TD ++ D + SKPE D +K + PE K +KK
Sbjct: 3 AITEMATD--SNDVINDGGTGDGIEKSTDSKPEIESDDLKPKS-KPEYDQMKKLVAMFKK 59
Query: 469 KNDQSLSSEDFATAKKLS--GEDLKADNKKDG-NFRRSRNNYNQGRKVRLTGRGSKAQRE 639
N + + E F + K+ + +D K G + ++ RNNYNQGR+VRL GR SKAQRE
Sbjct: 60 LNPE--AKEFFPSYKRNTNQSDDFVIAIKPSGEDNKKRRNNYNQGRRVRLPGRASKAQRE 117
Query: 640 DSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAA 819
DSIRRTVYVSDIDQSVTEE LAGLFSS GQVVDCRICGDP+SVLRFAFVEFSDD GAR+A
Sbjct: 118 DSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSA 177
Query: 820 LSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRT 999
LS+GGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDV T
Sbjct: 178 LSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNT 237
Query: 1000 FFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPV 1179
FF+SACGEVTR+RLLGDQ+HSTRIAFVEFAMAESAV ALNCSG+VLGSQPIRVSPSKTPV
Sbjct: 238 FFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPV 297
Query: 1180 RPRFSRSPSSN 1212
R R +RSPS N
Sbjct: 298 RSRITRSPSPN 308
>gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabidopsis
thaliana]
Length = 295
Score = 395 bits (1013), Expect = 1e-107
Identities = 212/282 (75%), Positives = 233/282 (82%), Gaps = 9/282 (3%)
Frame = +1
Query: 385 SKPEPGVDQMKKLALNPE---AK*FFPSYKKKNDQSLSSEDFATAKKLS--GEDLKADNK 549
SKPE D +K + PE K +KK N + + E F + K+ + +D K
Sbjct: 17 SKPEIESDDLKPKS-KPEYDQMKKLVAMFKKLNPE--AKEFFPSYKRNTNQSDDFVIAIK 73
Query: 550 KDG-NFRRSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYG 726
G + ++ RNNYNQGR+VRL GR SKAQREDSIRRTVYVSDIDQSVTEE LAGLFSS G
Sbjct: 74 PSGEDNKKRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCG 133
Query: 727 QVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTF 906
QVVDCRICGDP+SVLRFAFVEFSDD GAR+ALS+GGTMIGYYPVRVLPSKTAILPVNPTF
Sbjct: 134 QVVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTF 193
Query: 907 LPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEF 1086
LPRSEDEREMCSRTIYCTNVDKNATEDDV TFF+SACGEVTR+RLLGDQ+HSTRIAFVEF
Sbjct: 194 LPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEF 253
Query: 1087 AMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSPSSN 1212
AMAESAV ALNCSG+VLGSQPIRVSPSKTPVR R +RSPS N
Sbjct: 254 AMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSPSPN 295
>gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein
from Arabidopsis thaliana gi|2129727 and contains RNA recognition
PF|00076 domain. ESTs gb|H37317, gb|F14415, gb|AA651290 come from this
gene
Length = 829
Score = 392 bits (1006), Expect = 9e-107
Identities = 203/241 (84%), Positives = 214/241 (88%), Gaps = 7/241 (2%)
Frame = +1
Query: 436 EAK*FFPSYKKKNDQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVRLTG 615
EAK FFPSYK+ +Q S+DF A K SGE DNKK RR RNNYNQGR+VRL G
Sbjct: 8 EAKEFFPSYKRNTNQ---SDDFVIAIKPSGE----DNKKVAINRRRRNNYNQGRRVRLPG 60
Query: 616 RGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFS 795
R SKAQREDSIRRTVYVSDIDQSVTEE LAGLFSS GQVVDCRICGDP+SVLRFAFVEFS
Sbjct: 61 RASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFS 120
Query: 796 DDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKN 975
DD GAR+ALS+GGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKN
Sbjct: 121 DDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKN 180
Query: 976 ATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIR 1155
ATEDDV TFF+SACGEVTR+RLLGDQ+HSTRIAFVEFAMAESAV ALNCSG+VLGSQPI
Sbjct: 181 ATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIS 240
Query: 1156 V 1158
V
Sbjct: 241 V 241
>gi|255639113|gb|ACU19856.1| unknown [Glycine max]
Length = 296
Score = 365 bits (936), Expect = 1e-098
Identities = 190/288 (65%), Positives = 227/288 (78%), Gaps = 8/288 (2%)
Frame = +1
Query: 346 DSKPESESDLKPKSKPEPGVDQMKKLALNPEAK*FFP-SYKKKNDQSLSSEDFATAKKLS 522
DSKP++ES+ + VD K LNP AK FFP SY +D + + +
Sbjct: 15 DSKPKAESEFSVQKL----VDMFTK--LNPLAKEFFPSSYSPNHDHGFQGFNQLSPTQFL 68
Query: 523 GEDLKADNKKDGNFRRSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVL 702
+ N+ N RR RN++NQGR+ R++GR KAQREDSIRRTVYVS+IDQ VTEE L
Sbjct: 69 VSTKPSANENFLNSRRRRNSFNQGRR-RVSGRSLKAQREDSIRRTVYVSEIDQHVTEERL 127
Query: 703 AGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTA 882
A LFSS GQV+DCRICGDPHSVLRFAFVEF+D++GAR AL++GGT++GYYPVRVLPSKTA
Sbjct: 128 AALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTA 187
Query: 883 ILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHS 1062
ILPVNPTFLPRS+DEREMC+RTIYCTN+DK ++ +V+ FFESACGEV R+RLLGDQ+HS
Sbjct: 188 ILPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQVHS 247
Query: 1063 TRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSPS 1206
TRIAFVEFAMAESA+ ALNCSG++LG+QPIRVSPSKTPVRPR R S
Sbjct: 248 TRIAFVEFAMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRVPRPAS 295
>gi|225462109|ref|XP_002277842.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 292
Score = 358 bits (918), Expect = 2e-096
Identities = 176/226 (77%), Positives = 200/226 (88%), Gaps = 3/226 (1%)
Frame = +1
Query: 529 DLKADNKKDG--NFRRSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVL 702
D D+ D N RR RNNYNQGR+ RL+GR +AQREDSIRRTVYVSDIDQ VTEE L
Sbjct: 65 DFSKDSPNDAYPNNRRRRNNYNQGRR-RLSGRAFRAQREDSIRRTVYVSDIDQHVTEERL 123
Query: 703 AGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTA 882
A LFSS GQVVDCR+CGDPHSVLRFAFVEF+D+HGARAAL++GGTM+GYYPVRVLPSKTA
Sbjct: 124 AALFSSCGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTA 183
Query: 883 ILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHS 1062
ILPVNPTFLPRSEDEREMC+RT+YCTN+DK ++ +V+ FFE ACGEV+R+RLLGD +HS
Sbjct: 184 ILPVNPTFLPRSEDEREMCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHS 243
Query: 1063 TRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRS 1200
TRIAFVEFAMAESA+ ALNCSG+VLG+QPIRVSPSKTPVRPR R+
Sbjct: 244 TRIAFVEFAMAESAIVALNCSGLVLGTQPIRVSPSKTPVRPRVPRA 289
>gi|224056565|ref|XP_002298913.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 351 bits (898), Expect = 3e-094
Identities = 168/211 (79%), Positives = 193/211 (91%), Gaps = 1/211 (0%)
Frame = +1
Query: 565 RRSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCR 744
+R RNN+NQGR+ +L GR +AQ+EDSIRRTVYVSDIDQ VTEE LAGLFS GQVVDCR
Sbjct: 94 KRKRNNFNQGRR-KLNGRAYRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVVDCR 152
Query: 745 ICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSED 924
+CGDPHSVLRFAFVEF+D+ GARAAL++GGTM+GYYPVRVLPSKTAILPVNPTFLPRSED
Sbjct: 153 VCGDPHSVLRFAFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSED 212
Query: 925 EREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESA 1104
EREMC+RT+YCTN+DK ++ +V+ FFES CGEVTR+RLLGDQ+HSTRIAFVEFAMAESA
Sbjct: 213 EREMCTRTVYCTNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMAESA 272
Query: 1105 VGALNCSGVVLGSQPIRVSPSKTPVRPRFSR 1197
+ ALNCSG+ LGSQP+RVSPSKTPVRPR +R
Sbjct: 273 IVALNCSGMALGSQPVRVSPSKTPVRPRVTR 303
>gi|224114547|ref|XP_002316790.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 343 bits (878), Expect = 7e-092
Identities = 172/240 (71%), Positives = 201/240 (83%), Gaps = 4/240 (1%)
Frame = +1
Query: 487 SSEDFATAKKLSGEDLKADNKKDGNF---RRSRNNYNQGRKVRLTGRGSKAQREDSIRRT 657
SS + K+ + NK+ N +R RN++NQGR+ RL GR +AQREDSIRRT
Sbjct: 66 SSYNKNNPKQFHINNFPVPNKQSANDNFPKRRRNDFNQGRR-RLNGRAYRAQREDSIRRT 124
Query: 658 VYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGT 837
VYVSDIDQ VTEE LAGLFS GQVVDCRICGDP SVLRFAFVEF+ + GARAAL++GGT
Sbjct: 125 VYVSDIDQHVTEEQLAGLFSGCGQVVDCRICGDPRSVLRFAFVEFAVEQGARAALNLGGT 184
Query: 838 MIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESAC 1017
M+GYYPVRVLPSKTAILPVNPTFLP+SEDEREMC+RT+YCTN++K ++ +V+ FFES C
Sbjct: 185 MLGYYPVRVLPSKTAILPVNPTFLPQSEDEREMCTRTVYCTNIEKKVSQAEVKNFFESIC 244
Query: 1018 GEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSR 1197
GEVTR+RLLGD +HSTRIAFVEFAMAESA+ ALNCSG+VLGSQP+RVSPSKTPVRPR +R
Sbjct: 245 GEVTRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGMVLGSQPVRVSPSKTPVRPRVTR 304
>gi|255578158|ref|XP_002529948.1| RNA-binding protein, putative [Ricinus
communis]
Length = 281
Score = 341 bits (874), Expect = 2e-091
Identities = 182/277 (65%), Positives = 216/277 (77%), Gaps = 14/277 (5%)
Frame = +1
Query: 340 VTDSKPESESDLK-PKSKPEPGVDQMKKLALNPEAK*FFPSYKKKND---QSLSSEDFA- 504
+ + + +SD+K + + VD K LNP AK FFPS N+ L+ +FA
Sbjct: 13 IASNNKKMDSDVKNSEFSVQKLVDMFTK--LNPLAKEFFPSSYNNNNITHNFLNLNNFAV 70
Query: 505 TAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQS 684
K S D + N RR RNNYNQG++ RL GR +AQR+DSIRRTVYVSDIDQ
Sbjct: 71 VVDKQSPIDNFSSN------RRKRNNYNQGKR-RLNGRAYRAQRDDSIRRTVYVSDIDQH 123
Query: 685 VTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRV 864
VTEE LAGLFSS GQVVDCR+CGDPHSVLRFAFVEF+D+HGARAAL++GGT++GYYP RV
Sbjct: 124 VTEERLAGLFSSCGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTVLGYYPFRV 183
Query: 865 LPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLL 1044
LPSKTAILPVNPTFLPRSEDEREMCSRT+YCTN+DK ++ +V+TFFES CGEVTR+RLL
Sbjct: 184 LPSKTAILPVNPTFLPRSEDEREMCSRTVYCTNIDKKISQAEVKTFFESTCGEVTRLRLL 243
Query: 1045 GDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIR 1155
GD +HSTRIAFVEFAMAESA+ ALNCSG+V+G+QPIR
Sbjct: 244 GDHVHSTRIAFVEFAMAESAIIALNCSGMVVGTQPIR 280
>gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 213
Score = 335 bits (859), Expect = 1e-089
Identities = 163/210 (77%), Positives = 182/210 (86%)
Frame = +1
Query: 574 RNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICG 753
+N YNQG R+ R S+AQREDSIRRTVYVSDIDQ VTEE LA LF + GQVVDCR+CG
Sbjct: 2 KNGYNQGNNRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRVCG 61
Query: 754 DPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDERE 933
DP+SVLRFAFVEF+D+ GARAALS+ GTM+GYYPVRVLPSKTAI+PVNPTFLPRSEDERE
Sbjct: 62 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPRSEDERE 121
Query: 934 MCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGA 1113
MC+RTIYCTN+DK ++ DV+ FFES CGEV R+RLLGD HSTRIAFVEF MAESA+ A
Sbjct: 122 MCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESAMAA 181
Query: 1114 LNCSGVVLGSQPIRVSPSKTPVRPRFSRSP 1203
LNCSG +LGS PIRVSPSKTPVRPR RSP
Sbjct: 182 LNCSGAILGSLPIRVSPSKTPVRPRSPRSP 211
>gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 256
Score = 334 bits (856), Expect = 2e-089
Identities = 163/212 (76%), Positives = 183/212 (86%)
Frame = +1
Query: 568 RSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRI 747
R +N +NQ K R+ R S+AQREDSIRRTVYVSDIDQ VTEE LA LF + GQVVDCR+
Sbjct: 43 RKKNGFNQVNKRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRV 102
Query: 748 CGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 927
CGDP+SVLRFAFVEF+D+ GARAALS+ GTM+GYYPVRVLPSKTAI+PVNPTFLPRSEDE
Sbjct: 103 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPRSEDE 162
Query: 928 REMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAV 1107
REMC+RTIYCTN+DK ++ DV+ FFES CGEV R+RLLGD HSTRIAFVEF MAESA+
Sbjct: 163 REMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESAM 222
Query: 1108 GALNCSGVVLGSQPIRVSPSKTPVRPRFSRSP 1203
ALNCSG +LGS PIRVSPSKTPVRPR RSP
Sbjct: 223 AALNCSGAILGSLPIRVSPSKTPVRPRSPRSP 254
>gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [Ricinus
communis]
Length = 385
Score = 334 bits (856), Expect = 2e-089
Identities = 175/279 (62%), Positives = 205/279 (73%), Gaps = 8/279 (2%)
Frame = +1
Query: 382 KSKPEPGVDQMKKLA-----LNPEAK*FFPSYKKKNDQSLSSEDFATAKKLSGEDLKADN 546
++K + G++ M L LNP AK F P N+ F + N
Sbjct: 108 RAKSDNGLNDMSDLVEILSNLNPMAKEFVPP-SLVNNHGYLGNGFGYTNNFPAQ-TNPGN 165
Query: 547 KKDGNFRRSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYG 726
+R +N++NQGR+ R+ R S AQRED IRRTVYVSDIDQ VTEE LAGLF G
Sbjct: 166 AIGNTIKRKKNSFNQGRR-RMNTRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFVHCG 224
Query: 727 QVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTF 906
QVVDCRICGDP+SVLRFAF+EF+D+ GARAAL++ GT++G+YP+RVLPSKTAI PVNPTF
Sbjct: 225 QVVDCRICGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGFYPLRVLPSKTAIAPVNPTF 284
Query: 907 LPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEF 1086
LPRSEDEREMC+RT+YCTN+DK T+ DVR FFES CGEV R+RLLGD HSTRIAFVEF
Sbjct: 285 LPRSEDEREMCARTVYCTNIDKKVTQADVRLFFESFCGEVQRLRLLGDYHHSTRIAFVEF 344
Query: 1087 AMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSP 1203
+AESA+ ALNCSG VLGS PIRVSPSKTPVRPR RSP
Sbjct: 345 TVAESAILALNCSGAVLGSLPIRVSPSKTPVRPRIPRSP 383
>gi|116781618|gb|ABK22180.1| unknown [Picea sitchensis]
Length = 288
Score = 331 bits (848), Expect = 2e-088
Identities = 159/210 (75%), Positives = 185/210 (88%), Gaps = 1/210 (0%)
Frame = +1
Query: 559 NFRRSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVD 738
N RR +NN+NQG++ RL GR +AQ+EDS+RRTVYV DID VTEE LA LF + GQV+D
Sbjct: 73 NSRRKKNNFNQGKR-RLNGRNIRAQQEDSVRRTVYVCDIDHQVTEEQLAALFINCGQVID 131
Query: 739 CRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRS 918
CRICGDP+SVLRFAF+EF+D+ GARAALS+ GTM+GYYPVRVLPSKTAILPVNPTFLPRS
Sbjct: 132 CRICGDPNSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVNPTFLPRS 191
Query: 919 EDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAE 1098
EDEREMC+RTIYCTN+DK ++ +VR FFES CGEV+R+RLLGD +HSTRIAFVEF MAE
Sbjct: 192 EDEREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAE 251
Query: 1099 SAVGALNCSGVVLGSQPIRVSPSKTPVRPR 1188
SA+ ALNCSG ++GS PIRVSPSKTPVRPR
Sbjct: 252 SAILALNCSGAIVGSLPIRVSPSKTPVRPR 281
>gi|302769672|ref|XP_002968255.1| hypothetical protein SELMODRAFT_66365
[Selaginella moellendorffii]
Length = 260
Score = 331 bits (848), Expect = 2e-088
Identities = 167/254 (65%), Positives = 203/254 (79%), Gaps = 5/254 (1%)
Frame = +1
Query: 427 LNPEAK*FFPSYKKKNDQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVR 606
LNP AK F P + D +LS E +K+++ + + ++ +R +N YN G+K R
Sbjct: 11 LNPLAKEFVP--PSRGDPALSKE--LLSKQINHQQQQLQQQQPLQQQRKQNGYNTGKK-R 65
Query: 607 LTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFV 786
R SKAQRE+ IRRTVYVSDIDQ VTEE LA LF + GQV+DCR+CGDP+SVLRFAFV
Sbjct: 66 YNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQVIDCRVCGDPNSVLRFAFV 125
Query: 787 EFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNV 966
EF+D+ GAR AL++ GTM+G+YPVRVLPSKTAI+PVNPTFLPRSEDER+MC+RTIYCTN+
Sbjct: 126 EFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFLPRSEDERQMCARTIYCTNI 185
Query: 967 DKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQ 1146
DK ++ DV+ FFES CGEV+R+RLLGD HSTRIAFVEFA+AESA+ ALNCSG +LGS
Sbjct: 186 DKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAESAMAALNCSGAILGSL 245
Query: 1147 PIRVSPSKTPVRPR 1188
PIRVSPSKTPVRPR
Sbjct: 246 PIRVSPSKTPVRPR 259
>gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis
thaliana]
Length = 358
Score = 329 bits (841), Expect = 1e-087
Identities = 171/266 (64%), Positives = 202/266 (75%), Gaps = 9/266 (3%)
Frame = +1
Query: 427 LNPEAK*FF-PSYKKKNDQSLSSEDFATA------KKLSGEDLKADNKKDGNFRRSRNNY 585
LNP A+ F PS K+ ++ F +A +G ++G FRR + ++
Sbjct: 93 LNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTGNGGYGNENGGFRR-KKSF 151
Query: 586 NQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHS 765
QG++ R+ R S AQRED IRRTVYVSD+DQ VTEE LAGLF S GQVVDCRICGDP+S
Sbjct: 152 GQGKR-RMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNS 210
Query: 766 VLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSR 945
VLRFAF+EF+D+ GA AL++ GTM+G+YPV+VLPSKTAI PVNPTFLPR+EDEREMC+R
Sbjct: 211 VLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCAR 270
Query: 946 TIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCS 1125
TIYCTN+DK T+ DV+ FFES CGEV R+RLLGD HSTRIAFVEF MAESA+ ALNCS
Sbjct: 271 TIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCS 330
Query: 1126 GVVLGSQPIRVSPSKTPVRPRFSRSP 1203
GVVLGS PIRVSPSKTPVRPR R P
Sbjct: 331 GVVLGSLPIRVSPSKTPVRPRSPRHP 356
>gi|224118386|ref|XP_002317806.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 328 bits (840), Expect = 2e-087
Identities = 161/213 (75%), Positives = 183/213 (85%), Gaps = 1/213 (0%)
Frame = +1
Query: 565 RRSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCR 744
RR +N+YNQGR+ R+ R S AQR++ I+RTVYVSDIDQ VTEE LAGLF GQVVDCR
Sbjct: 80 RRKKNSYNQGRR-RMNNRTSMAQRDEIIKRTVYVSDIDQQVTEEQLAGLFIHCGQVVDCR 138
Query: 745 ICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSED 924
ICGDP+SVLRFAFVEF+D+ GAR ALS+ GT++G+YP+RVLPSKTAI PVNPTFLPRSED
Sbjct: 139 ICGDPNSVLRFAFVEFTDEEGARTALSLSGTVLGFYPLRVLPSKTAIAPVNPTFLPRSED 198
Query: 925 EREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESA 1104
EREMC+RT+YCTN+DK T+ DVR FFES CGEV R+RLLGD HSTRIAFVEFA+AESA
Sbjct: 199 EREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAVAESA 258
Query: 1105 VGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSP 1203
+ ALNCSG VLGS PIRVSPSKTPVRPR R P
Sbjct: 259 IAALNCSGAVLGSLPIRVSPSKTPVRPRLPRPP 291
>gi|302788706|ref|XP_002976122.1| hypothetical protein SELMODRAFT_56081
[Selaginella moellendorffii]
Length = 267
Score = 328 bits (840), Expect = 2e-087
Identities = 172/265 (64%), Positives = 203/265 (76%), Gaps = 4/265 (1%)
Frame = +1
Query: 406 DQMKKLALNPEAK*FF-PSYKKKNDQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNN 582
D +KK LNP AK F PS + D + E A + ++K G F +N
Sbjct: 6 DLLKK--LNPLAKEFVPPSPTTQGDLEVLLETKAFFVLATFSFFAGSDRKLGLFLVQQNG 63
Query: 583 YNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPH 762
YN G+K R R SKAQRE+ IRRTVYVSDIDQ VTEE LA LF + GQV+DCR+CGDP+
Sbjct: 64 YNTGKK-RYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQVIDCRVCGDPN 122
Query: 763 SVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCS 942
SVLRFAFVEF+D+ GAR AL++ GTM+G+YPVRVLPSKTAI+PVNPTFLPRSEDER+MC+
Sbjct: 123 SVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFLPRSEDERQMCA 182
Query: 943 RTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNC 1122
RTIYCTN+DK ++ DV+ FFES CGEV+R+RLLGD HSTRIAFVEFA+AESA+ ALNC
Sbjct: 183 RTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAESAMAALNC 242
Query: 1123 SGVVLGSQPIRVSPSKTPVRPRFSR 1197
SG +LGS PIRVSPSKTPVRPR R
Sbjct: 243 SGAILGSLPIRVSPSKTPVRPRSPR 267
>gi|225426552|ref|XP_002272303.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 397
Score = 327 bits (838), Expect = 3e-087
Identities = 163/222 (73%), Positives = 187/222 (84%), Gaps = 2/222 (0%)
Frame = +1
Query: 541 DNKKDGNFR-RSRNNYNQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFS 717
+N ++G R +NN+ QG++ R+ R S AQRE+ IRRTVYVSDIDQ VTEE LA LF
Sbjct: 175 NNTRNGQVNGRRKNNFGQGKR-RMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFI 233
Query: 718 SYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVN 897
+ GQVVDCR+CGDP+SVLRFAFVEF+D+ GARAALS+ GTM+GYYPVRVLPSKTAI PVN
Sbjct: 234 TCGQVVDCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVN 293
Query: 898 PTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAF 1077
PTFLPR+EDEREMC+RTIYCTN+DK ++ DV+ FFES CGEV R+RLLGD HSTRIAF
Sbjct: 294 PTFLPRNEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAF 353
Query: 1078 VEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSP 1203
VEF MAESA+ ALNCSGVVLGS PIRVSPSKTPVRPR R P
Sbjct: 354 VEFIMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRLP 395
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 633,410,340,094
Number of Sequences: 15229318
Number of Extensions: 633410340094
Number of Successful Extensions: 173938820
Number of sequences better than 0.0: 0
|
