BLASTX 7.6.2

Query= UN05350 /QuerySize=1454
        (1453 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q8WXA9|SFR12_HUMAN Splicing factor, arginine/serine-rich 12 O...     62   1e-008
sp|Q8BZX4|SFR12_MOUSE Splicing factor, arginine/serine-rich 12 O...     62   1e-008
sp|Q9JKL7|SFR12_RAT Splicing factor, arginine/serine-rich 12 OS=...     62   1e-008
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ...     52   7e-006

>sp|Q8WXA9|SFR12_HUMAN Splicing factor, arginine/serine-rich 12 OS=Homo sapiens
        GN=SFRS12 PE=1 SV=1

          Length = 508

 Score =  62 bits (148), Expect = 1e-008
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +1

Query: 640 DSIRRTVYVSDID-QSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARA 816
           D IRRTVYV +++ Q+ T + L   F   G+V   R+ GD     RFAFVEF+D +    
Sbjct:  62 DEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPR 121

Query: 817 ALSVGGTMIGYYPVRVLPSKTAIL 888
           AL+  G M G  P+++  S  AI+
Sbjct: 122 ALAFNGVMFGDRPLKINHSNNAIV 145


 Score =  58 bits (139), Expect = 1e-007
 Identities = 38/123 (30%), Positives = 56/123 (45%), Gaps = 3/123 (2%)
 Frame = +1

Query:  820 LSVGGTMIGYYPVRVLPSKTAIL---PVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDD 990
            L V  + +G  P   L    A L   P  P        + +   RT+Y  N++   T  D
Sbjct:   22 LGVSLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQTTTAD 81

Query:  991 VRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSK 1170
                F    GEV  +R+ GD+   TR AFVEFA   S   AL  +GV+ G +P++++ S 
Sbjct:   82 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKINHSN 141

Query: 1171 TPV 1179
              +
Sbjct:  142 NAI 144

>sp|Q8BZX4|SFR12_MOUSE Splicing factor, arginine/serine-rich 12 OS=Mus musculus
        GN=Sfrs12 PE=2 SV=1

          Length = 494

 Score =  62 bits (148), Expect = 1e-008
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +1

Query: 640 DSIRRTVYVSDID-QSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARA 816
           D IRRTVYV +++ Q+ T + L   F   G+V   R+ GD     RFAFVEF+D +    
Sbjct:  65 DEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPR 124

Query: 817 ALSVGGTMIGYYPVRVLPSKTAIL 888
           AL+  G M G  P+++  S  AI+
Sbjct: 125 ALAFNGVMFGDRPLKINHSNNAIV 148


 Score =  59 bits (141), Expect = 8e-008
 Identities = 39/127 (30%), Positives = 62/127 (48%), Gaps = 3/127 (2%)
 Frame = +1

Query:  808 ARAALSVGGTMIGYYPVRVL-PSKTAI--LPVNPTFLPRSEDEREMCSRTIYCTNVDKNA 978
            A ++L V  + +G  P   L P+ T +  +P  P        + +   RT+Y  N++   
Sbjct:   21 AVSSLGVSLSSLGAIPAAALDPNITTLGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQT 80

Query:  979 TEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRV 1158
            T  D    F    GEV  +R+ GD+   TR AFVEFA   S   AL  +GV+ G +P+++
Sbjct:   81 TTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140

Query: 1159 SPSKTPV 1179
            + S   +
Sbjct:  141 NHSNNAI 147

>sp|Q9JKL7|SFR12_RAT Splicing factor, arginine/serine-rich 12 OS=Rattus
        norvegicus GN=Sfrs12 PE=1 SV=1

          Length = 494

 Score =  62 bits (148), Expect = 1e-008
 Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
 Frame = +1

Query: 640 DSIRRTVYVSDID-QSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARA 816
           D IRRTVYV +++ Q+ T + L   F   G+V   R+ GD     RFAFVEF+D +    
Sbjct:  65 DEIRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPR 124

Query: 817 ALSVGGTMIGYYPVRVLPSKTAIL 888
           AL+  G M G  P+++  S  AI+
Sbjct: 125 ALAFNGVMFGDRPLKINHSNNAIV 148


 Score =  60 bits (145), Expect = 3e-008
 Identities = 40/127 (31%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
 Frame = +1

Query:  808 ARAALSVGGTMIGYYPVRVL-PSKTAI--LPVNPTFLPRSEDEREMCSRTIYCTNVDKNA 978
            A ++L V  + +G  P   L P+ TA+  +P  P        + +   RT+Y  N++   
Sbjct:   21 AVSSLGVSLSSLGAIPAAALDPNITALGEIPQPPLMGNVDPSKIDEIRRTVYVGNLNSQT 80

Query:  979 TEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRV 1158
            T  D    F    GEV  +R+ GD+   TR AFVEFA   S   AL  +GV+ G +P+++
Sbjct:   81 TTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRALAFNGVMFGDRPLKI 140

Query: 1159 SPSKTPV 1179
            + S   +
Sbjct:  141 NHSNNAI 147

>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and nuclear
        OS=Emericella nidulans GN=pab1 PE=2 SV=2

          Length = 732

 Score =  52 bits (124), Expect = 7e-006
 Identities = 31/77 (40%), Positives = 46/77 (59%), Gaps = 3/77 (3%)
 Frame = +1

Query: 655 TVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGD--PHSVLRFAFVEFSDD-HGARAALS 825
           ++YV ++D SVTE +L  LFSS GQV   R+C D      L +A+V ++D  HG RA   
Sbjct:  43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDE 102

Query: 826 VGGTMIGYYPVRVLPSK 876
           +  T+I   P R++ S+
Sbjct: 103 LNYTLIKGKPCRIMWSQ 119

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,113,185,847
Number of Sequences: 518415
Number of Extensions: 22113185847
Number of Successful Extensions: 153311817
Number of sequences better than 0.0: 0