BLASTX 7.6.2
Query= UN05350 /QuerySize=1454
(1453 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTI... 464 7e-131
TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacti... 421 7e-118
TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTI... 396 2e-110
TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protei... 329 5e-090
TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CI... 317 1e-086
TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding... 308 7e-084
TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding... 308 7e-084
TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protei... 304 1e-082
TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RN... 298 7e-081
TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interac... 277 2e-074
>TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 315
Score = 464 bits (1193), Expect = 7e-131
Identities = 250/305 (81%), Positives = 262/305 (85%), Gaps = 17/305 (5%)
Frame = +1
Query: 319 DGIEKSLVTDSKPESES-DLKPKSKPEPGVDQMKKLA-----LNPEAK*FFPSYKKKNDQ 480
DGIEKS TDSKPE ES DLKPKSKPE DQMKKL LNPEAK FFPSYK+ +Q
Sbjct: 22 DGIEKS--TDSKPEIESDDLKPKSKPE--YDQMKKLVAMFKKLNPEAKEFFPSYKRNTNQ 77
Query: 481 SLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVRLTGRGSKAQREDSIRRTV 660
S+DF A K SGE DNKK RR RNNYNQGR+VRL GR SKAQREDSIRRTV
Sbjct: 78 ---SDDFVIAIKPSGE----DNKKVAINRRRRNNYNQGRRVRLPGRASKAQREDSIRRTV 130
Query: 661 YVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTM 840
YVSDIDQSVTEE LAGLFSS GQVVDCRICGDP+SVLRFAFVEFSDD GAR+ALS+GGTM
Sbjct: 131 YVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTM 190
Query: 841 IGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACG 1020
IGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDV TFF+SACG
Sbjct: 191 IGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACG 250
Query: 1021 EVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRS 1200
EVTR+RLLGDQ+HSTRIAFVEFAMAESAV ALNCSG+VLGSQPIRVSPSKTPVR R +RS
Sbjct: 251 EVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRS 310
Query: 1201 PSSN* 1215
PS N*
Sbjct: 311 PSPN* 315
>TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacting Domain 9);
RNA binding / protein binding | chr3:4849788-4851601 FORWARD
Length = 328
Score = 421 bits (1081), Expect = 7e-118
Identities = 224/310 (72%), Positives = 253/310 (81%), Gaps = 16/310 (5%)
Frame = +1
Query: 310 LVTDGIEKSLVTDSKPESESDLKPKSKPEPGVDQMKKLALNPEAK*FFPSY---KKKN-- 474
++ +GIEKS +TDSK E+ES L V KK LNP AK FFPSY KK N
Sbjct: 27 IIDEGIEKSSITDSKTETESRLDMHKL----VAMFKK--LNPLAKEFFPSYYDPKKNNQV 80
Query: 475 ---DQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVRLTGRGSKAQREDS 645
+Q L ++DF T KK SGE+ D KKD N R+ R NY+QGR+ RLTGR SKAQREDS
Sbjct: 81 AKANQFLPADDFETTKKQSGEEFDLDAKKDDNTRK-RRNYSQGRR-RLTGRISKAQREDS 138
Query: 646 IRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALS 825
IRRTVYVSDIDQSVTEE LAGLFS+ GQVVDCRICGDPHSVLRFAFVEF+DD GA ALS
Sbjct: 139 IRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALS 198
Query: 826 VGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFF 1005
+GGTM+G+YPVRVLPSKTAILPVNPTFLPRSEDEREMC+RTIYCTN+DK ++ DVR FF
Sbjct: 199 LGGTMLGFYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFF 258
Query: 1006 ESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRP 1185
ESACGEVTR+RLLGDQLHSTRIAFVEFA+A+SA+ ALNCSG+V+GSQPIRVSPSKTPVRP
Sbjct: 259 ESACGEVTRLRLLGDQLHSTRIAFVEFALADSALSALNCSGMVVGSQPIRVSPSKTPVRP 318
Query: 1186 RFSRSPSSN* 1215
R +R PS+N*
Sbjct: 319 RITRPPSTN* 328
>TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 309
Score = 396 bits (1017), Expect = 2e-110
Identities = 215/312 (68%), Positives = 243/312 (77%), Gaps = 11/312 (3%)
Frame = +1
Query: 298 SVHDLVTDGIEKSLVTDSKPESESDLKPKSKPEPGVDQMKKLALNPE---AK*FFPSYKK 468
++ ++ TD ++ D + SKPE D +K + PE K +KK
Sbjct: 3 AITEMATD--SNDVINDGGTGDGIEKSTDSKPEIESDDLKPKS-KPEYDQMKKLVAMFKK 59
Query: 469 KNDQSLSSEDFATAKKLS--GEDLKADNKKDG-NFRRSRNNYNQGRKVRLTGRGSKAQRE 639
N + + E F + K+ + +D K G + ++ RNNYNQGR+VRL GR SKAQRE
Sbjct: 60 LNPE--AKEFFPSYKRNTNQSDDFVIAIKPSGEDNKKRRNNYNQGRRVRLPGRASKAQRE 117
Query: 640 DSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAA 819
DSIRRTVYVSDIDQSVTEE LAGLFSS GQVVDCRICGDP+SVLRFAFVEFSDD GAR+A
Sbjct: 118 DSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSA 177
Query: 820 LSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVRT 999
LS+GGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDV T
Sbjct: 178 LSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNT 237
Query: 1000 FFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPV 1179
FF+SACGEVTR+RLLGDQ+HSTRIAFVEFAMAESAV ALNCSG+VLGSQPIRVSPSKTPV
Sbjct: 238 FFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPV 297
Query: 1180 RPRFSRSPSSN* 1215
R R +RSPS N*
Sbjct: 298 RSRITRSPSPN* 309
>TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875174-11877188 REVERSE
Length = 359
Score = 329 bits (841), Expect = 5e-090
Identities = 171/266 (64%), Positives = 202/266 (75%), Gaps = 9/266 (3%)
Frame = +1
Query: 427 LNPEAK*FF-PSYKKKNDQSLSSEDFATA------KKLSGEDLKADNKKDGNFRRSRNNY 585
LNP A+ F PS K+ ++ F +A +G ++G FRR + ++
Sbjct: 93 LNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTGNGGYGNENGGFRR-KKSF 151
Query: 586 NQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHS 765
QG++ R+ R S AQRED IRRTVYVSD+DQ VTEE LAGLF S GQVVDCRICGDP+S
Sbjct: 152 GQGKR-RMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNS 210
Query: 766 VLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSR 945
VLRFAF+EF+D+ GA AL++ GTM+G+YPV+VLPSKTAI PVNPTFLPR+EDEREMC+R
Sbjct: 211 VLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCAR 270
Query: 946 TIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCS 1125
TIYCTN+DK T+ DV+ FFES CGEV R+RLLGD HSTRIAFVEF MAESA+ ALNCS
Sbjct: 271 TIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCS 330
Query: 1126 GVVLGSQPIRVSPSKTPVRPRFSRSP 1203
GVVLGS PIRVSPSKTPVRPR R P
Sbjct: 331 GVVLGSLPIRVSPSKTPVRPRSPRHP 356
>TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CID12; RNA
binding | chr4:6557336-6559143 FORWARD
Length = 337
Score = 317 bits (811), Expect = 1e-086
Identities = 166/258 (64%), Positives = 198/258 (76%), Gaps = 9/258 (3%)
Frame = +1
Query: 427 LNPEAK*FF-PSYKKKNDQSLSSEDFATAKKLSGEDLKADN---KKDGNFRRSRNNYNQG 594
LNP AK F PS K + FA ++ + A N +DG+FRR ++ QG
Sbjct: 76 LNPMAKEFIPPSLTKPVVNGFNGGFFA----VNNGFVAAGNFPVNEDGSFRRKKSFGQQG 131
Query: 595 RKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLR 774
++ R+ R S AQRE+ IRRTVYVSDIDQ VTEE LAGLF +GQVVDCRICGDP+SVLR
Sbjct: 132 KR-RMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLR 190
Query: 775 FAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 954
FAF+EF+D+ GAR AL++ GTM+G+YPV+V+PSKTAI PVNPTFLPR+EDEREMC+RTIY
Sbjct: 191 FAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIY 250
Query: 955 CTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVV 1134
CTN+DK T+ D++ FFES CGEV R+RLLGD H TRI FVEF MAESA+ ALNCSGV+
Sbjct: 251 CTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVL 310
Query: 1135 LGSQPIRVSPSKTPVRPR 1188
LGS PIRVSPSKTPVR R
Sbjct: 311 LGSLPIRVSPSKTPVRSR 328
>TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 308 bits (788), Expect = 7e-084
Identities = 156/258 (60%), Positives = 195/258 (75%), Gaps = 4/258 (1%)
Frame = +1
Query: 427 LNPEAK*FFPSYKKKNDQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVR 606
LNP A+ F P ++ + + AD + +F R R ++ QG++ R
Sbjct: 97 LNPMAQEFVPPSLARSQSGVLRNGLGFTNNFAAPPKLADG--NDHFPRRRRSFGQGKR-R 153
Query: 607 LTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFV 786
+ R S AQ++D IRRTVYVSDIDQ VTEE LAG+F + GQVVDCR+CGDP+SVLRFAF+
Sbjct: 154 MNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFI 213
Query: 787 EFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNV 966
EF+++ GARAALS+ GT++G+YP++VLPSKTAI PVNPTFLPRSEDEREMC RT+YCTN+
Sbjct: 214 EFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNI 273
Query: 967 DKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQ 1146
DK T+ D++ FFE CGEV R+R LGD H TRIAFVEFAMAESA+ AL+CSG+VLG+
Sbjct: 274 DKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGAL 332
Query: 1147 PIRVSPSKTPVRPRFSRS 1200
PIRVSPSKTPVRP F R+
Sbjct: 333 PIRVSPSKTPVRPHFPRA 350
>TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 308 bits (788), Expect = 7e-084
Identities = 156/258 (60%), Positives = 195/258 (75%), Gaps = 4/258 (1%)
Frame = +1
Query: 427 LNPEAK*FFPSYKKKNDQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVR 606
LNP A+ F P ++ + + AD + +F R R ++ QG++ R
Sbjct: 97 LNPMAQEFVPPSLARSQSGVLRNGLGFTNNFAAPPKLADG--NDHFPRRRRSFGQGKR-R 153
Query: 607 LTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFV 786
+ R S AQ++D IRRTVYVSDIDQ VTEE LAG+F + GQVVDCR+CGDP+SVLRFAF+
Sbjct: 154 MNKRTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFI 213
Query: 787 EFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNV 966
EF+++ GARAALS+ GT++G+YP++VLPSKTAI PVNPTFLPRSEDEREMC RT+YCTN+
Sbjct: 214 EFTNEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNI 273
Query: 967 DKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQ 1146
DK T+ D++ FFE CGEV R+R LGD H TRIAFVEFAMAESA+ AL+CSG+VLG+
Sbjct: 274 DKRITQIDLKGFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGAL 332
Query: 1147 PIRVSPSKTPVRPRFSRS 1200
PIRVSPSKTPVRP F R+
Sbjct: 333 PIRVSPSKTPVRPHFPRA 350
>TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875028-11877188 REVERSE
Length = 407
Score = 304 bits (778), Expect = 1e-082
Identities = 159/252 (63%), Positives = 190/252 (75%), Gaps = 9/252 (3%)
Frame = +1
Query: 427 LNPEAK*FF-PSYKKKNDQSLSSEDFATA------KKLSGEDLKADNKKDGNFRRSRNNY 585
LNP A+ F PS K+ ++ F +A +G ++G FRR + ++
Sbjct: 93 LNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTGNGGYGNENGGFRR-KKSF 151
Query: 586 NQGRKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHS 765
QG++ R+ R S AQRED IRRTVYVSD+DQ VTEE LAGLF S GQVVDCRICGDP+S
Sbjct: 152 GQGKR-RMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNS 210
Query: 766 VLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSR 945
VLRFAF+EF+D+ GA AL++ GTM+G+YPV+VLPSKTAI PVNPTFLPR+EDEREMC+R
Sbjct: 211 VLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCAR 270
Query: 946 TIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCS 1125
TIYCTN+DK T+ DV+ FFES CGEV R+RLLGD HSTRIAFVEF MAESA+ ALNCS
Sbjct: 271 TIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCS 330
Query: 1126 GVVLGSQPIRVS 1161
GVVLGS PIR S
Sbjct: 331 GVVLGSLPIRSS 342
Score = 71 bits (172), Expect = 2e-012
Identities = 38/90 (42%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Frame = +1
Query: 931 EMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVG 1110
++ RT+Y +++D+ TE+ + F S CG+V R+ GD R AF+EF E A+
Sbjct: 169 DVIRRTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMT 227
Query: 1111 ALNCSGVVLGSQPIRVSPSKT---PVRPRF 1191
ALN SG +LG P++V PSKT PV P F
Sbjct: 228 ALNLSGTMLGFYPVKVLPSKTAIAPVNPTF 257
>TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RNA binding |
chr4:6557336-6559019 FORWARD
Length = 327
Score = 298 bits (762), Expect = 7e-081
Identities = 156/247 (63%), Positives = 188/247 (76%), Gaps = 9/247 (3%)
Frame = +1
Query: 427 LNPEAK*FF-PSYKKKNDQSLSSEDFATAKKLSGEDLKADN---KKDGNFRRSRNNYNQG 594
LNP AK F PS K + FA ++ + A N +DG+FRR ++ QG
Sbjct: 76 LNPMAKEFIPPSLTKPVVNGFNGGFFA----VNNGFVAAGNFPVNEDGSFRRKKSFGQQG 131
Query: 595 RKVRLTGRGSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLR 774
++ R+ R S AQRE+ IRRTVYVSDIDQ VTEE LAGLF +GQVVDCRICGDP+SVLR
Sbjct: 132 KR-RMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLR 190
Query: 775 FAFVEFSDDHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIY 954
FAF+EF+D+ GAR AL++ GTM+G+YPV+V+PSKTAI PVNPTFLPR+EDEREMC+RTIY
Sbjct: 191 FAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIY 250
Query: 955 CTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVV 1134
CTN+DK T+ D++ FFES CGEV R+RLLGD H TRI FVEF MAESA+ ALNCSGV+
Sbjct: 251 CTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNCSGVL 310
Query: 1135 LGSQPIR 1155
LGS PIR
Sbjct: 311 LGSLPIR 317
Score = 63 bits (152), Expect = 4e-010
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Frame = +1
Query: 931 EMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVG 1110
E+ RT+Y +++D+ TE+ + F G+V R+ GD R AF+EF A
Sbjct: 146 EIIRRTVYVSDIDQQVTEEQLAGLF-IGFGQVVDCRICGDPNSVLRFAFIEFTDEVGART 204
Query: 1111 ALNCSGVVLGSQPIRVSPSKT---PVRPRF 1191
ALN SG +LG P++V PSKT PV P F
Sbjct: 205 ALNLSGTMLGFYPVKVMPSKTAIAPVNPTF 234
>TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interacting Domain
13); RNA binding / nucleic acid binding / nucleotide binding |
chr5:8345402-8347776 REVERSE
Length = 321
Score = 277 bits (707), Expect = 2e-074
Identities = 157/308 (50%), Positives = 196/308 (63%), Gaps = 16/308 (5%)
Frame = +1
Query: 292 VDSVHDLVTDGIEKSLVTDSKPESESDLKPKSKPEPGVDQMKKLA-----------LNPE 438
VDS ++ D SLV ++KP D PKSK +++ + LNP
Sbjct: 11 VDSSNNQNIDNNTTSLV-ETKPSCSDDQTPKSKSSVLTNELIQRTSEVNLKSEISHLNPM 69
Query: 439 AK*FFPSYKKKNDQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVRLTGR 618
AK F PS+ Q+ SE + + K G F R N+ +GR +T +
Sbjct: 70 AKEFVPSFLA---QTHHSEFWGNRFWFTNHFPKQTIFLIGQFATMRRNFGKGRP-WITKK 125
Query: 619 GSKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSD 798
+ Q ED I+RTVYVSDID VTEE LA LF S GQVVDCR+CGD S+LRFAF+EF+D
Sbjct: 126 TNLVQNEDMIKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGDYKSILRFAFIEFTD 185
Query: 799 DHGARAALSVGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNA 978
GAR+AL GTM G +P+RV SKTAI PVNP+FLP+S+DE E C +T+YCTN+DK
Sbjct: 186 AEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNPSFLPQSKDELEKCGKTVYCTNIDKEV 245
Query: 979 TEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRV 1158
T+ ++ FF++ CGEV +RLLGD H TRIAFVEF +AESA+ ALNCSGVVLG PIRV
Sbjct: 246 TKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNCSGVVLGELPIRV 305
Query: 1159 SPSKTPVR 1182
SPSKTPVR
Sbjct: 306 SPSKTPVR 313
Score = 72 bits (175), Expect = 8e-013
Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Frame = +1
Query: 901 TFLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVTRIRLLGDQLHSTRIAFV 1080
T L ++ED M RT+Y +++D TE+ + + F S CG+V R+ GD R AF+
Sbjct: 126 TNLVQNED---MIKRTVYVSDIDNQVTEEQLASLFLS-CGQVVDCRMCGDYKSILRFAFI 181
Query: 1081 EFAMAESAVGALNCSGVVLGSQPIRVSPSKT---PVRPRF 1191
EF AE A AL SG + GS PIRV SKT PV P F
Sbjct: 182 EFTDAEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNPSF 221
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,313,538,790
Number of Sequences: 33410
Number of Extensions: 3313538790
Number of Successful Extensions: 116509070
Number of sequences better than 0.0: 0
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