BLASTX 7.6.2
Query= UN05403 /QuerySize=831
(830 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S... 325 2e-089
TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S... 271 4e-073
TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S... 266 2e-071
TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S... 248 3e-066
TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S... 185 3e-047
>TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610583 REVERSE
Length = 181
Score = 325 bits (832), Expect = 2e-089
Identities = 157/182 (86%), Positives = 164/182 (90%), Gaps = 3/182 (1%)
Frame = -3
Query: 723 MIMSEENRRAISKYLFQEGVLFAKKDFNLAQHPLVEGVPNLQVIKLMQSFKSKEYVRETF 544
MI+SE NRR ISKYLF+EGVLFAKKDFNL QHPL+E VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60
Query: 543 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATSKKQQKPLGRPM--GGDRPRGPPRSDGER 370
AWMHYYWFLTNEGIDFLRTYLNLPSEIVPAT KKQQKPLGRP GGDRPRGPPR DGER
Sbjct: 61 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGGGGDRPRGPPRGDGER 120
Query: 369 RFGDRDGYRGVPRSGGEFGDKSGAPADYQPSFRGPGAGSRPGFGRGAGGFGAGPAAGSDL 190
RFGDRDGYRG P+SGGE+GDK+GAPADYQP FRG G+R GFGRGAGGFG G AAGSDL
Sbjct: 121 RFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGG-AAGSDL 179
Query: 189 P* 184
P*
Sbjct: 180 P* 181
>TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 178
Score = 271 bits (692), Expect = 4e-073
Identities = 137/184 (74%), Positives = 150/184 (81%), Gaps = 10/184 (5%)
Frame = -3
Query: 723 MIMSEENRRAISKYLFQEGVLFAKKDFNLAQHPLVEGVPNLQVIKLMQSFKSKEYVRETF 544
MI+SE NRR I KYLF+EGV FAKKDFNL +HPL++ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 543 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATSKKQQKPLGRPMG---GDRPRGPPRSDGE 373
AWMHYYWFLTNEGI+FLRTYLNLPS++VPAT KK KP GRP G GDR RGPPRSDG+
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGD 119
Query: 372 R-RFGDRDGYRGVPRSGGEFGDKSGAPADYQPSFRGPGAGSRPGFGRGAGGFGAGPAAGS 196
R RFGDRDGYRG PR G E K GAPAD+QPSF+ G G RPGFGRGAGG+ A +GS
Sbjct: 120 RPRFGDRDGYRGGPRGGDE---KGGAPADFQPSFQ--GGGGRPGFGRGAGGYSAAAPSGS 174
Query: 195 DLP* 184
P*
Sbjct: 175 GFP* 178
>TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S10 (RPS10C) |
chr5:21355781-21357003 REVERSE
Length = 180
Score = 266 bits (678), Expect = 2e-071
Identities = 135/185 (72%), Positives = 150/185 (81%), Gaps = 10/185 (5%)
Frame = -3
Query: 723 MIMSEENRRAISKYLFQEGVLFAKKDFNLAQHPLVEGVPNLQVIKLMQSFKSKEYVRETF 544
MI+SE NR+ I KYLF+EGV FAKKDFNLA+HPL++ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 543 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATSKKQQKPLGRPMG---GDRPRGPPRSDGE 373
AWMHYYWFLTNEGI+FLRTYLNLPS++VPAT KK KP GRP G GDR RGP G+
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGD 119
Query: 372 R-RFGDRDGYRGVPRSGGEF-GDKSGAPADYQPSFRGPGAGSRPGFGRGAGGFGAGPAAG 199
R RFGDRDGYR PR+GGEF G+K GAPADYQPSF+G G GFGRGAGG+ A +G
Sbjct: 120 RPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQPSFQGSGR----GFGRGAGGYSAAAPSG 175
Query: 198 SDLP* 184
S LP*
Sbjct: 176 SGLP* 180
>TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610203 REVERSE
Length = 135
Score = 248 bits (633), Expect = 3e-066
Identities = 118/136 (86%), Positives = 122/136 (89%), Gaps = 3/136 (2%)
Frame = -3
Query: 585 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATSKKQQKPLGRPM--G 412
MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPAT KKQQKPLGRP G
Sbjct: 1 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGGG 60
Query: 411 GDRPRGPPRSDGERRFGDRDGYRGVPRSGGEFGDKSGAPADYQPSFRGPGAGSRPGFGRG 232
GDRPRGPPR DGERRFGDRDGYRG P+SGGE+GDK+GAPADYQP FRG G+R GFGRG
Sbjct: 61 GDRPRGPPRGDGERRFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFRGGAGGARQGFGRG 120
Query: 231 AGGFGAGPAAGSDLP* 184
AGGFG G AAGSDLP*
Sbjct: 121 AGGFGGG-AAGSDLP* 135
>TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 150
Score = 185 bits (469), Expect = 3e-047
Identities = 97/147 (65%), Positives = 110/147 (74%), Gaps = 6/147 (4%)
Frame = -3
Query: 723 MIMSEENRRAISKYLFQEGVLFAKKDFNLAQHPLVEGVPNLQVIKLMQSFKSKEYVRETF 544
MI+SE NRR I KYLF+EGV FAKKDFNL +HPL++ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 543 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATSKKQQKPLGRPMGGDR---PRGPPRSDGE 373
AWMHYYWFLTNEGI+FLRTYLNLPS++VPAT KK KP GRP GG R +G +D +
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRGGDEKGGAPADFQ 119
Query: 372 RRFGDRDGYRGVPRSGGEFGDKSGAPA 292
F G G R G G + AP+
Sbjct: 120 PSFQGGGGRPGFGRGAG--GYSAAAPS 144
Score = 62 bits (148), Expect = 5e-010
Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 5/53 (9%)
Frame = -3
Query: 342 GVPRSGGEFGDKSGAPADYQPSFRGPGAGSRPGFGRGAGGFGAGPAAGSDLP* 184
G PR G E K GAPAD+QPSF+ G G RPGFGRGAGG+ A +GS P*
Sbjct: 103 GGPRGGDE---KGGAPADFQPSFQ--GGGGRPGFGRGAGGYSAAAPSGSGFP* 150
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,313,538,790
Number of Sequences: 33410
Number of Extensions: 3313538790
Number of Successful Extensions: 116509070
Number of sequences better than 0.0: 0
|
