BLASTX 7.6.2
Query= UN05418 /QuerySize=737
(736 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S... 252 3e-067
TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S... 50 2e-006
TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S... 50 2e-006
>TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S10,
chloroplast, putative | chr3:4220310-4221526 REVERSE
Length = 192
Score = 252 bits (641), Expect = 3e-067
Identities = 136/181 (75%), Positives = 141/181 (77%), Gaps = 9/181 (4%)
Frame = -1
Query: 706 LPSYYPLSPTFHLLLPPNRK-----SLCFHLLLLLRLLMAALAPASLTNPPETLDEPASD 542
+PS P S + L P+ S C + L P +L PE LDEPA
Sbjct: 16 IPSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKPSVSLTKVFAVPDTLDPTPEILDEPA-- 73
Query: 541 DFSEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPL 362
SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPL
Sbjct: 74 --SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPL 131
Query: 361 PTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 182
PTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 132 PTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 191
Query: 181 * 179
*
Sbjct: 192 * 192
Score = 63 bits (152), Expect = 1e-010
Identities = 37/53 (69%), Positives = 42/53 (79%), Gaps = 5/53 (9%)
Frame = -3
Query: 725 MAVSSVTSFILPSFANLSSS-SSTKQKVSLLPSSSSSSSTHGGIGSCVLNKPS 570
MAVS+V+SF+LPSF SSS SST+ KVSLLP SSSTHGG+ SCVL KPS
Sbjct: 1 MAVSTVSSFLLPSFGIPSSSPSSTRLKVSLLP----SSSTHGGLSSCVLTKPS 49
>TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -1
Query: 475 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 299
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 298 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 182
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S20 (RPS20A) |
chr3:16471606-16472312 REVERSE
Length = 125
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -1
Query: 475 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 299
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 298 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 182
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -1
Query: 475 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 299
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 298 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 182
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -1
Query: 475 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 299
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 298 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 182
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -1
Query: 475 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 299
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 298 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 182
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 50 bits (117), Expect = 2e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -1
Query: 475 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARF- 299
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 298 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 182
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,403,647,941
Number of Sequences: 33410
Number of Extensions: 3403647941
Number of Successful Extensions: 121610911
Number of sequences better than 0.0: 0
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