BLASTX 7.6.2
Query= UN05477 /QuerySize=1128
(1127 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G15790.1 | Symbols: MBD11, ATMBD11 | MBD11; DN... 242 3e-064
TAIR9_protein||AT1G15340.1 | Symbols: MBD10 | MBD10; DNA binding... 155 7e-038
>TAIR9_protein||AT3G15790.1 | Symbols: MBD11, ATMBD11 | MBD11; DNA binding /
methyl-CpG binding | chr3:5343209-5344386 FORWARD
Length = 255
Score = 242 bits (617), Expect = 3e-064
Identities = 126/171 (73%), Positives = 143/171 (83%), Gaps = 6/171 (3%)
Frame = +2
Query: 110 MGTEEESVSVELPAPSSWKKLFFPNKVGSVKKTEIVFVAPTGEEISNRKQLDQYLKSHPG 289
MG EEE VSVELPAPSSWKKLF+PNKVGSVKKTE+VFVAPTGEEISNRKQL+QYLKSHPG
Sbjct: 1 MGGEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPG 60
Query: 290 NPSVTEFDWTTSGTPRRSAGISDKKTKSTPSPDKEPPKKRGRTKSSGSKKYGEEGEKPEG 469
NP++ EFDWTTSGTPRRSA IS+ KTK+TPSPDKEPPKKRGRTKS SKK EGEK EG
Sbjct: 61 NPAIAEFDWTTSGTPRRSARISE-KTKATPSPDKEPPKKRGRTKSPVSKK-DAEGEKSEG 118
Query: 470 GGVENSHVQEEDTEMSALKG--TEDNVTVKDGTGETEKANDKRRKGCREDS 616
GG ENSHV +DTEM+ +G +NVT K+G+GETE+ ND + E++
Sbjct: 119 GGEENSHV--KDTEMNPPEGIAENENVTDKNGSGETERVNDAKENIVAEET 167
Score = 89 bits (220), Expect = 4e-018
Identities = 57/104 (54%), Positives = 66/104 (63%), Gaps = 17/104 (16%)
Frame = +3
Query: 588 KDEKVAEKTPDPALVQEAGGESMKEQTHDLVGDGSKERVEFQTDKEEETGSVVKTSVDTE 767
K+ VAE+TP+ A VQE GESMKE+ D V D SKE TDKE++TGS+ K SVD E
Sbjct: 159 KENIVAEETPNAAPVQEE-GESMKEKALDSVDDKSKE-----TDKEKDTGSIEKNSVDVE 212
Query: 768 IKTAGANTEQKKEVAGQGAPEFEPEAETRNQEGNGLTTEAEGKE 899
KT A+ E+K EAETRN E NGLTTEAEGKE
Sbjct: 213 KKTVEASDEKKNS-----------EAETRNHEENGLTTEAEGKE 245
>TAIR9_protein||AT1G15340.1 | Symbols: MBD10 | MBD10; DNA binding / methyl-CpG
binding | chr1:5275895-5277474 REVERSE
Length = 385
Score = 155 bits (390), Expect = 7e-038
Identities = 84/164 (51%), Positives = 106/164 (64%), Gaps = 2/164 (1%)
Frame = +2
Query: 110 MGTEEESVSVELPAPSSWKKLFFPNKVGSVKKTEIVFVAPTGEEISNRKQLDQYLKSHPG 289
M +E VS+ELPAP+SWKKLF+P + G+ +KTEIVFVAPTGEEIS+RKQL+QYLK+HPG
Sbjct: 1 MENTDELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPG 60
Query: 290 NPSVTEFDWTTSGTPRRSAGISDKKTKSTPSPDKEPPKKRGRTKSSGSKKYGEEGEKPEG 469
NP ++EF+WTT TPRRS+ IS K +TP+PDKEP K+ R S K E EK E
Sbjct: 61 NPVISEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKK-RRSSLTKKDNKEAAEKNEE 119
Query: 470 GGV-ENSHVQEEDTEMSALKGTEDNVTVKDGTGETEKANDKRRK 598
V EN V ++ +A E E EK N++ K
Sbjct: 120 AAVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEK 163
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,403,647,941
Number of Sequences: 33410
Number of Extensions: 3403647941
Number of Successful Extensions: 121610911
Number of sequences better than 0.0: 0
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