BLASTX 7.6.2
Query= UN05571 /QuerySize=806
(805 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0P5J9|RPR1A_BOVIN Regulation of nuclear pre-mRNA domain-cont... 101 8e-021
sp|Q5ZM30|RPR1A_CHICK Regulation of nuclear pre-mRNA domain-cont... 101 8e-021
sp|Q96P16|RPR1A_HUMAN Regulation of nuclear pre-mRNA domain-cont... 101 8e-021
sp|Q8VDS4|RPR1A_MOUSE Regulation of nuclear pre-mRNA domain-cont... 101 8e-021
sp|Q5R8Y3|RPR1A_PONAB Regulation of nuclear pre-mRNA domain-cont... 101 8e-021
sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-cont... 100 1e-020
sp|Q9CSU0|RPR1B_MOUSE Regulation of nuclear pre-mRNA domain-cont... 100 1e-020
sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-cont... 72 4e-012
sp|Q6NXI6|RPRD2_MOUSE Regulation of nuclear pre-mRNA domain-cont... 72 5e-012
sp|O74814|YJ03_SCHPO UPF0400 protein C337.03 OS=Schizosaccharomy... 58 6e-008
>sp|Q0P5J9|RPR1A_BOVIN Regulation of nuclear pre-mRNA domain-containing protein
1A OS=Bos taurus GN=RPRD1A PE=2 SV=2
Length = 312
Score = 101 bits (250), Expect = 8e-021
Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Frame = +3
Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
S FSE L KL++L+++QQS++TLS W I +R + IVT WE++ + +K+ LY
Sbjct: 2 SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61
Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
LAND++QNSKR+G EF +F V+ +A K ++ S+ D+ K + R++ IWEER V+
Sbjct: 62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SETDESCKKHLGRVLSIWEERSVY 117
>sp|Q5ZM30|RPR1A_CHICK Regulation of nuclear pre-mRNA domain-containing protein
1A OS=Gallus gallus GN=RPRD1A PE=2 SV=1
Length = 268
Score = 101 bits (250), Expect = 8e-021
Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Frame = +3
Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
S FSE L KL++L+++QQS++TLS W I +R + LIV+ WE++ + +K+ LY
Sbjct: 2 SAFSEAALERKLSELSNSQQSVQTLSLWLIHHRKHSALIVSVWERELRKAKPNRKLTFLY 61
Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
LAND++QNSKR+G EF +F V+ +A K ++ S+ D+ K R++ IWEER V+
Sbjct: 62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SESDESCKKHPGRVLSIWEERSVY 117
>sp|Q96P16|RPR1A_HUMAN Regulation of nuclear pre-mRNA domain-containing protein
1A OS=Homo sapiens GN=RPRD1A PE=1 SV=1
Length = 312
Score = 101 bits (250), Expect = 8e-021
Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Frame = +3
Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
S FSE L KL++L+++QQS++TLS W I +R + IVT WE++ + +K+ LY
Sbjct: 2 SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61
Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
LAND++QNSKR+G EF +F V+ +A K ++ S+ D+ K + R++ IWEER V+
Sbjct: 62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SETDESCKKHLGRVLSIWEERSVY 117
>sp|Q8VDS4|RPR1A_MOUSE Regulation of nuclear pre-mRNA domain-containing protein
1A OS=Mus musculus GN=Rprd1a PE=2 SV=1
Length = 312
Score = 101 bits (250), Expect = 8e-021
Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Frame = +3
Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
S FSE L KL++L+++QQS++TLS W I +R + IVT WE++ + +K+ LY
Sbjct: 2 SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61
Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
LAND++QNSKR+G EF +F V+ +A K ++ S+ D+ K + R++ IWEER V+
Sbjct: 62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SETDESCKKHLGRVLSIWEERSVY 117
>sp|Q5R8Y3|RPR1A_PONAB Regulation of nuclear pre-mRNA domain-containing protein
1A OS=Pongo abelii GN=RPRD1A PE=2 SV=1
Length = 312
Score = 101 bits (250), Expect = 8e-021
Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
Frame = +3
Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
S FSE L KL++L+++QQS++TLS W I +R + IVT WE++ + +K+ LY
Sbjct: 2 SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61
Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
LAND++QNSKR+G EF +F V+ +A K ++ S+ D+ K + R++ IWEER V+
Sbjct: 62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SETDESCKKHLGRVLSIWEERSVY 117
>sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-containing protein
1B OS=Homo sapiens GN=RPRD1B PE=1 SV=1
Length = 326
Score = 100 bits (248), Expect = 1e-020
Identities = 52/118 (44%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
Frame = +3
Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
S FSE L KL++L+++QQS++TLS W I +R A IV+ W ++ + +K+ LY
Sbjct: 2 SSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLY 61
Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVFG 488
LAND++QNSKR+G EF EF +VL A +A + D+ K + RL+ IW+ER V+G
Sbjct: 62 LANDVIQNSKRKGPEFTREFESVLVDAFSHVA-READEGCKKPLERLLNIWQERSVYG 118
>sp|Q9CSU0|RPR1B_MOUSE Regulation of nuclear pre-mRNA domain-containing protein
1B OS=Mus musculus GN=Rprd1b PE=2 SV=2
Length = 326
Score = 100 bits (248), Expect = 1e-020
Identities = 52/118 (44%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
Frame = +3
Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
S FSE L KL++L+++QQS++TLS W I +R A IV+ W ++ + +K+ LY
Sbjct: 2 SSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLY 61
Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVFG 488
LAND++QNSKR+G EF EF +VL A +A + D+ K + RL+ IW+ER V+G
Sbjct: 62 LANDVIQNSKRKGPEFTREFESVLVDAFSHVA-READEGCKKPLERLLNIWQERSVYG 118
>sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-containing protein
2 OS=Homo sapiens GN=RPRD2 PE=1 SV=1
Length = 1461
Score = 72 bits (175), Expect = 4e-012
Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Frame = +3
Query: 147 EEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLYLAND 326
E L K + +T +SI+ LS WCI N+ IV W K + ++ L YLAND
Sbjct: 24 ESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMKWLRRSAYPHRLNLFYLAND 83
Query: 327 ILQNSKRQGN-EFVDEFWNVLPKA---VKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
++QN KR+ F + F +VLP+A VKD +VS+ V R+ KIWE+R V+
Sbjct: 84 VIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKS-------VERIFKIWEDRNVY 133
>sp|Q6NXI6|RPRD2_MOUSE Regulation of nuclear pre-mRNA domain-containing protein
2 OS=Mus musculus GN=Rprd2 PE=1 SV=1
Length = 1469
Score = 72 bits (174), Expect = 5e-012
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
Frame = +3
Query: 147 EEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLYLAND 326
E L K + +T +SI+ LS WCI N+ IV W K + ++ L YLAND
Sbjct: 24 ESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMKWLRRSTYPHRLNLFYLAND 83
Query: 327 ILQNSKRQGN-EFVDEFWNVLPKA---VKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
++QN KR+ F + F +VLP+A VKD +VS+ + R+ KIWE+R V+
Sbjct: 84 VIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKS-------IERIFKIWEDRNVY 133
>sp|O74814|YJ03_SCHPO UPF0400 protein C337.03 OS=Schizosaccharomyces pombe
GN=SPBC337.03 PE=1 SV=1
Length = 387
Score = 58 bits (139), Expect = 6e-008
Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
Frame = +3
Query: 165 KLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLYLANDILQNSK 344
KLA LN TQ+SI ++HW +F++ A+ IV W + + + +K+ LLYL N+++Q S+
Sbjct: 11 KLATLNETQESITGIAHWVMFHKRYADEIVQIWLEALYESSSNKKLLLLYLLNEVVQQSR 70
Query: 345 -RQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
++ +E++D + +V D A + K + + +W +R +F
Sbjct: 71 VKKISEYIDAVSPYVVNSVAD-AYASVPASIKTKIKYVFDVWCQRGIF 117
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,113,185,847
Number of Sequences: 518415
Number of Extensions: 22113185847
Number of Successful Extensions: 153311817
Number of sequences better than 0.0: 0
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