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SwissProt blast output of UN05571


BLASTX 7.6.2

Query= UN05571 /QuerySize=806
        (805 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q0P5J9|RPR1A_BOVIN Regulation of nuclear pre-mRNA domain-cont...    101   8e-021
sp|Q5ZM30|RPR1A_CHICK Regulation of nuclear pre-mRNA domain-cont...    101   8e-021
sp|Q96P16|RPR1A_HUMAN Regulation of nuclear pre-mRNA domain-cont...    101   8e-021
sp|Q8VDS4|RPR1A_MOUSE Regulation of nuclear pre-mRNA domain-cont...    101   8e-021
sp|Q5R8Y3|RPR1A_PONAB Regulation of nuclear pre-mRNA domain-cont...    101   8e-021
sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-cont...    100   1e-020
sp|Q9CSU0|RPR1B_MOUSE Regulation of nuclear pre-mRNA domain-cont...    100   1e-020
sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-cont...     72   4e-012
sp|Q6NXI6|RPRD2_MOUSE Regulation of nuclear pre-mRNA domain-cont...     72   5e-012
sp|O74814|YJ03_SCHPO UPF0400 protein C337.03 OS=Schizosaccharomy...     58   6e-008

>sp|Q0P5J9|RPR1A_BOVIN Regulation of nuclear pre-mRNA domain-containing protein
        1A OS=Bos taurus GN=RPRD1A PE=2 SV=2

          Length = 312

 Score =  101 bits (250), Expect = 8e-021
 Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = +3

Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
           S FSE  L  KL++L+++QQS++TLS W I +R  +  IVT WE++    +  +K+  LY
Sbjct:   2 SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
           LAND++QNSKR+G EF  +F  V+ +A K ++ S+ D+  K  + R++ IWEER V+
Sbjct:  62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SETDESCKKHLGRVLSIWEERSVY 117

>sp|Q5ZM30|RPR1A_CHICK Regulation of nuclear pre-mRNA domain-containing protein
        1A OS=Gallus gallus GN=RPRD1A PE=2 SV=1

          Length = 268

 Score =  101 bits (250), Expect = 8e-021
 Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = +3

Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
           S FSE  L  KL++L+++QQS++TLS W I +R  + LIV+ WE++    +  +K+  LY
Sbjct:   2 SAFSEAALERKLSELSNSQQSVQTLSLWLIHHRKHSALIVSVWERELRKAKPNRKLTFLY 61

Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
           LAND++QNSKR+G EF  +F  V+ +A K ++ S+ D+  K    R++ IWEER V+
Sbjct:  62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SESDESCKKHPGRVLSIWEERSVY 117

>sp|Q96P16|RPR1A_HUMAN Regulation of nuclear pre-mRNA domain-containing protein
        1A OS=Homo sapiens GN=RPRD1A PE=1 SV=1

          Length = 312

 Score =  101 bits (250), Expect = 8e-021
 Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = +3

Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
           S FSE  L  KL++L+++QQS++TLS W I +R  +  IVT WE++    +  +K+  LY
Sbjct:   2 SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
           LAND++QNSKR+G EF  +F  V+ +A K ++ S+ D+  K  + R++ IWEER V+
Sbjct:  62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SETDESCKKHLGRVLSIWEERSVY 117

>sp|Q8VDS4|RPR1A_MOUSE Regulation of nuclear pre-mRNA domain-containing protein
        1A OS=Mus musculus GN=Rprd1a PE=2 SV=1

          Length = 312

 Score =  101 bits (250), Expect = 8e-021
 Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = +3

Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
           S FSE  L  KL++L+++QQS++TLS W I +R  +  IVT WE++    +  +K+  LY
Sbjct:   2 SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
           LAND++QNSKR+G EF  +F  V+ +A K ++ S+ D+  K  + R++ IWEER V+
Sbjct:  62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SETDESCKKHLGRVLSIWEERSVY 117

>sp|Q5R8Y3|RPR1A_PONAB Regulation of nuclear pre-mRNA domain-containing protein
        1A OS=Pongo abelii GN=RPRD1A PE=2 SV=1

          Length = 312

 Score =  101 bits (250), Expect = 8e-021
 Identities = 51/117 (43%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = +3

Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
           S FSE  L  KL++L+++QQS++TLS W I +R  +  IVT WE++    +  +K+  LY
Sbjct:   2 SAFSEAALEKKLSELSNSQQSVQTLSLWLIHHRKHSRPIVTVWERELRKAKPNRKLTFLY 61

Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
           LAND++QNSKR+G EF  +F  V+ +A K ++ S+ D+  K  + R++ IWEER V+
Sbjct:  62 LANDVIQNSKRKGPEFTKDFAPVIVEAFKHVS-SETDESCKKHLGRVLSIWEERSVY 117

>sp|Q9NQG5|RPR1B_HUMAN Regulation of nuclear pre-mRNA domain-containing protein
        1B OS=Homo sapiens GN=RPRD1B PE=1 SV=1

          Length = 326

 Score =  100 bits (248), Expect = 1e-020
 Identities = 52/118 (44%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
 Frame = +3

Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
           S FSE  L  KL++L+++QQS++TLS W I +R  A  IV+ W ++    +  +K+  LY
Sbjct:   2 SSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLY 61

Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVFG 488
           LAND++QNSKR+G EF  EF +VL  A   +A  + D+  K  + RL+ IW+ER V+G
Sbjct:  62 LANDVIQNSKRKGPEFTREFESVLVDAFSHVA-READEGCKKPLERLLNIWQERSVYG 118

>sp|Q9CSU0|RPR1B_MOUSE Regulation of nuclear pre-mRNA domain-containing protein
        1B OS=Mus musculus GN=Rprd1b PE=2 SV=2

          Length = 326

 Score =  100 bits (248), Expect = 1e-020
 Identities = 52/118 (44%), Positives = 77/118 (65%), Gaps = 1/118 (0%)
 Frame = +3

Query: 135 SVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLY 314
           S FSE  L  KL++L+++QQS++TLS W I +R  A  IV+ W ++    +  +K+  LY
Sbjct:   2 SSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLY 61

Query: 315 LANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVFG 488
           LAND++QNSKR+G EF  EF +VL  A   +A  + D+  K  + RL+ IW+ER V+G
Sbjct:  62 LANDVIQNSKRKGPEFTREFESVLVDAFSHVA-READEGCKKPLERLLNIWQERSVYG 118

>sp|Q5VT52|RPRD2_HUMAN Regulation of nuclear pre-mRNA domain-containing protein
        2 OS=Homo sapiens GN=RPRD2 PE=1 SV=1

          Length = 1461

 Score =  72 bits (175), Expect = 4e-012
 Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
 Frame = +3

Query: 147 EEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLYLAND 326
           E  L  K   + +T +SI+ LS WCI N+     IV  W K    +    ++ L YLAND
Sbjct:  24 ESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMKWLRRSAYPHRLNLFYLAND 83

Query: 327 ILQNSKRQGN-EFVDEFWNVLPKA---VKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
           ++QN KR+    F + F +VLP+A   VKD +VS+        V R+ KIWE+R V+
Sbjct:  84 VIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKS-------VERIFKIWEDRNVY 133

>sp|Q6NXI6|RPRD2_MOUSE Regulation of nuclear pre-mRNA domain-containing protein
        2 OS=Mus musculus GN=Rprd2 PE=1 SV=1

          Length = 1469

 Score =  72 bits (174), Expect = 5e-012
 Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 11/117 (9%)
 Frame = +3

Query: 147 EEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLYLAND 326
           E  L  K   + +T +SI+ LS WCI N+     IV  W K    +    ++ L YLAND
Sbjct:  24 ESSLDRKFQSVTNTMESIQGLSSWCIENKKHHSTIVYHWMKWLRRSTYPHRLNLFYLAND 83

Query: 327 ILQNSKRQGN-EFVDEFWNVLPKA---VKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
           ++QN KR+    F + F +VLP+A   VKD +VS+        + R+ KIWE+R V+
Sbjct:  84 VIQNCKRKNAIIFRESFADVLPEAAALVKDPSVSKS-------IERIFKIWEDRNVY 133

>sp|O74814|YJ03_SCHPO UPF0400 protein C337.03 OS=Schizosaccharomyces pombe
        GN=SPBC337.03 PE=1 SV=1

          Length = 387

 Score =  58 bits (139), Expect = 6e-008
 Identities = 33/108 (30%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
 Frame = +3

Query: 165 KLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPLLYLANDILQNSK 344
           KLA LN TQ+SI  ++HW +F++  A+ IV  W +  + +   +K+ LLYL N+++Q S+
Sbjct:  11 KLATLNETQESITGIAHWVMFHKRYADEIVQIWLEALYESSSNKKLLLLYLLNEVVQQSR 70

Query: 345 -RQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVF 485
            ++ +E++D     +  +V D A +      K  +  +  +W +R +F
Sbjct:  71 VKKISEYIDAVSPYVVNSVAD-AYASVPASIKTKIKYVFDVWCQRGIF 117

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,113,185,847
Number of Sequences: 518415
Number of Extensions: 22113185847
Number of Successful Extensions: 153311817
Number of sequences better than 0.0: 0