BLASTX 7.6.2
Query= UN05571 /QuerySize=806
(805 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular... 224 6e-059
TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular... 207 7e-054
TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular... 156 2e-038
TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein | chr5:... 118 4e-027
>TAIR9_protein||AT5G10060.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF618 (InterPro:IPR006903), Regulation of nuclear pre-mRNA
protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G65180.1); Has 4531 Blast hits to 4161 proteins in 412
species: Archae - 14; Bacteria - 404; Metazoa - 1999; Fungi - 666;
Plants - 262; Viruses - 36; Other Eukaryotes - 1150 (source: NCBI
BLink). | chr5:3145994-3148049 REVERSE
Length = 470
Score = 224 bits (570), Expect = 6e-059
Identities = 112/138 (81%), Positives = 123/138 (89%), Gaps = 1/138 (0%)
Frame = +3
Query: 129 MSSVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPL 308
MSSVFS++ILIDKLAKLNS+QQSIETLSHWCIFNR KAELIVTTWEKQFHSTEM QKVPL
Sbjct: 1 MSSVFSDQILIDKLAKLNSSQQSIETLSHWCIFNRSKAELIVTTWEKQFHSTEMDQKVPL 60
Query: 309 LYLANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVFG 488
LYLANDILQNSKRQGNEFV EFWNVLPKA+KDI VSQGDD GK V+R++KIWEER+VFG
Sbjct: 61 LYLANDILQNSKRQGNEFVQEFWNVLPKALKDI-VSQGDDNGKSAVARVIKIWEERRVFG 119
Query: 489 SRSMNLRDADAW*RLPSP 542
SRS +L+D +P P
Sbjct: 120 SRSKSLKDVMLGEDVPLP 137
Score = 131 bits (327), Expect = 9e-031
Identities = 74/100 (74%), Positives = 83/100 (83%), Gaps = 3/100 (3%)
Frame = +1
Query: 505 LETLMLGEDCPLPLDVTKKRSRGSKSSKRDSKSSRTKL-SSGGVAEKIASAYHLVVAENS 681
L+ +MLGED PLPLD++KKR RGSKSSKR+SKSSRTKL SSGGVAEKIASAYHLVVAENS
Sbjct: 125 LKDVMLGEDVPLPLDISKKRPRGSKSSKRESKSSRTKLASSGGVAEKIASAYHLVVAENS 184
Query: 682 NEEAEMSKCKSAVNE-SEMEKDVESFLYYCEDT-REKSLA 795
NEEAEM+KCKSAV +MEKDVE +D + KSLA
Sbjct: 185 NEEAEMNKCKSAVKRIRKMEKDVEEACSTAKDNPKRKSLA 224
>TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903),
Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), ENTH/VHS
(InterPro:IPR008942); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G10060.1); Has 3523 Blast hits to 3241
proteins in 333 species: Archae - 25; Bacteria - 251; Metazoa - 1575;
Fungi - 421; Plants - 142; Viruses - 17; Other Eukaryotes - 1092
(source: NCBI BLink). | chr5:26045625-26047806 FORWARD
Length = 440
Score = 207 bits (526), Expect = 7e-054
Identities = 106/138 (76%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
Frame = +3
Query: 129 MSSVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPL 308
MSS FSEEILID LAKLNSTQQSI+TLS WCI +R +AEL+VTTWEKQFHST++ QKVPL
Sbjct: 1 MSSPFSEEILIDNLAKLNSTQQSIQTLSQWCIVHRSEAELVVTTWEKQFHSTQIGQKVPL 60
Query: 309 LYLANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVFG 488
LYLANDILQNSKRQGNEFV EFW VLP A+KDI VS GDD GKGVVSRLV IWEER+VFG
Sbjct: 61 LYLANDILQNSKRQGNEFVQEFWKVLPGALKDI-VSLGDDYGKGVVSRLVNIWEERRVFG 119
Query: 489 SRSMNLRDADAW*RLPSP 542
SRS +L+D P P
Sbjct: 120 SRSKSLKDVMLSEEAPPP 137
Score = 121 bits (301), Expect = 9e-028
Identities = 70/126 (55%), Positives = 86/126 (68%), Gaps = 11/126 (8%)
Frame = +1
Query: 430 VAKALSPVWSR---YGKKEKCLDPVL*ILETLMLGEDCPLPLDVTKKRSRGSKSSKRDSK 600
V L +W +G + K L V ML E+ P PLDV+KKR RGSKS+KRDSK
Sbjct: 104 VVSRLVNIWEERRVFGSRSKSLKDV-------MLSEEAPPPLDVSKKRFRGSKSAKRDSK 156
Query: 601 SSRTKLSSGGVAEKIASAYHLVVAENSNEEAEMSKCKSAVNE-SEMEKDVESFLYYCEDT 777
S++TKLSSGGV+EKI SA++LV AENSNEE EM+KCKSAV +MEKDVE +D
Sbjct: 157 STKTKLSSGGVSEKIVSAFNLVRAENSNEETEMNKCKSAVRRIRKMEKDVEDACSTAKDP 216
Query: 778 REKSLA 795
R++SLA
Sbjct: 217 RKESLA 222
>TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF618 (InterPro:IPR006903), Regulation of nuclear
pre-mRNA protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G10060.1); Has 815 Blast hits to 806 proteins in 138 species:
Archae - 0; Bacteria - 10; Metazoa - 490; Fungi - 159; Plants - 81;
Viruses - 1; Other Eukaryotes - 74 (source: NCBI BLink). |
chr3:9948426-9951557 REVERSE
Length = 514
Score = 156 bits (393), Expect = 2e-038
Identities = 75/128 (58%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
Frame = +3
Query: 129 MSSVFSEEILIDKLAKLNSTQQSIETLSHWCIFNRVKAELIVTTWEKQFHSTEMAQKVPL 308
M S F+ +IL++KLAKLN++Q SIETLSHWCIF+ KA+ +V TW +QFH Q++
Sbjct: 1 MGSSFNAQILVEKLAKLNNSQASIETLSHWCIFHMNKAKHVVETWGRQFHCAPREQRLAY 60
Query: 309 LYLANDILQNSKRQGNEFVDEFWNVLPKAVKDIAVSQGDDRGKGVVSRLVKIWEERKVFG 488
LYLANDILQNS+R+G+EFV EFW VLP A++D+ + GDD G+ RLV IWEERKVFG
Sbjct: 61 LYLANDILQNSRRKGSEFVGEFWKVLPDALRDM-IENGDDFGRKSARRLVNIWEERKVFG 119
Query: 489 SRSMNLRD 512
SR L++
Sbjct: 120 SRGQILKE 127
>TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein |
chr5:26046478-26047806 FORWARD
Length = 312
Score = 118 bits (295), Expect = 4e-027
Identities = 63/94 (67%), Positives = 76/94 (80%), Gaps = 1/94 (1%)
Frame = +1
Query: 517 MLGEDCPLPLDVTKKRSRGSKSSKRDSKSSRTKLSSGGVAEKIASAYHLVVAENSNEEAE 696
ML E+ P PLDV+KKR RGSKS+KRDSKS++TKLSSGGV+EKI SA++LV AENSNEE E
Sbjct: 1 MLSEEAPPPLDVSKKRFRGSKSAKRDSKSTKTKLSSGGVSEKIVSAFNLVRAENSNEETE 60
Query: 697 MSKCKSAVNE-SEMEKDVESFLYYCEDTREKSLA 795
M+KCKSAV +MEKDVE +D R++SLA
Sbjct: 61 MNKCKSAVRRIRKMEKDVEDACSTAKDPRKESLA 94
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,403,647,941
Number of Sequences: 33410
Number of Extensions: 3403647941
Number of Successful Extensions: 121610911
Number of sequences better than 0.0: 0
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