BLASTX 7.6.2
Query= UN05615 /QuerySize=1214
(1213 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 ... 486 4e-135
gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabi... 483 3e-134
gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [... 481 9e-134
gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis ... 474 1e-131
gi|225463276|ref|XP_002264127.1| PREDICTED: hypothetical protein... 307 2e-081
gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 ... 307 4e-081
gi|224138286|ref|XP_002322776.1| predicted protein [Populus tric... 292 8e-077
gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [N... 290 3e-076
gi|224091455|ref|XP_002309257.1| predicted protein [Populus tric... 290 4e-076
gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleo... 289 7e-076
gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum] 267 3e-069
gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vini... 261 3e-067
gi|118487510|gb|ABK95582.1| unknown [Populus trichocarpa] 253 5e-065
gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare ... 247 5e-063
gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japo... 245 1e-062
gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare] 244 2e-062
gi|226497258|ref|NP_001140274.1| hypothetical protein LOC1002723... 232 1e-058
gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT... 232 1e-058
gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays] 231 2e-058
gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryz... 212 1e-052
>gi|15231200|ref|NP_190806.1| chloroplast RNA-binding protein 33 [Arabidopsis
thaliana]
Length = 329
Score = 486 bits (1250), Expect = 4e-135
Identities = 257/331 (77%), Positives = 277/331 (83%), Gaps = 11/331 (3%)
Frame = +1
Query: 22 MSSAYCPSLPVAVSVASTVSSSPTSNSLFSSHSNSKLFYRITPKPFKLVAKCPTPLFLHP 201
MSSAYC S VAVS A+T SS+ T N L SSHSNS+LFYR TPK FKLVA CP PL LH
Sbjct: 1 MSSAYCSS-AVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPLILHS 59
Query: 202 NTRRHRLLCAAE-------DEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQASVEEGR 360
N RRHR CAAE DEI S EEE EE EEG+EGEE+ + + TTQAS EEGR
Sbjct: 60 NIRRHRFFCAAETEASSADDEIQASVEEE--EEVEEEGDEGEEEVEEEKQTTQASGEEGR 117
Query: 361 LYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMF 540
LYVGNLPYTITSSELSQ+FGEAG VVDVQIVYDKVTDRSRGFGFVTMG+IEEAKEA+QMF
Sbjct: 118 LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMF 177
Query: 541 NSSQIGGRTVKVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKD 720
NSSQIGGRTVKVNFPEVPRGGE EVMRTKIRD+N SYVDSPHK+YAGNLGWNLTSQGLKD
Sbjct: 178 NSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKD 237
Query: 721 AFGDQPGVLGAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASE 900
AFGDQPGVLGAKVIYERN+GRSRGFGF+SFES E++QS L+ MNGVEVEGRALRLNLASE
Sbjct: 238 AFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASE 297
Query: 901 R-ATTEPRSSVAEGVTEEGSVGSSEVLSNIS 990
R T SV EG TEE S+ S+EVLSN+S
Sbjct: 298 REKPTVSPPSVEEGETEEASLESNEVLSNVS 328
>gi|297816516|ref|XP_002876141.1| RNA-binding protein cp33 [Arabidopsis lyrata
subsp. lyrata]
Length = 330
Score = 483 bits (1242), Expect = 3e-134
Identities = 261/332 (78%), Positives = 275/332 (82%), Gaps = 10/332 (3%)
Frame = +1
Query: 22 MSSAYCPSLPVAVSVASTVSSSPTSNSLFSSHSNSKLFYRITPKPFKLVAKCPTPLFLHP 201
MSSA C S VAVS A+T SS+ T N L SHSN +LFYR TPK FKLVA CP PL LH
Sbjct: 1 MSSASCSS-AVAVSAAATASSTATFNPLLFSHSNFRLFYRFTPKSFKLVANCPNPLILHS 59
Query: 202 NTRRHRLLCAAE-------DEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQASVEEGR 360
N RRHR CAAE +EI S EEE+ EE EE E EEDAD Q TTQAS EEGR
Sbjct: 60 NIRRHRFFCAAETEASSADEEIQASLEEEEEVEEEEEEEVEEEDADEKQ-TTQASGEEGR 118
Query: 361 LYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMF 540
LYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMF
Sbjct: 119 LYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMF 178
Query: 541 NSSQIGGRTVKVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKD 720
NSSQIGGRTVKVN PEVPRGGEREVMRTKIRD+N SYVDSPHKIYAGNLGWNLTSQGLKD
Sbjct: 179 NSSQIGGRTVKVNLPEVPRGGEREVMRTKIRDNNRSYVDSPHKIYAGNLGWNLTSQGLKD 238
Query: 721 AFGDQPGVLGAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASE 900
AFGDQPGVLGAKVIYERN+GRSRGFGF+SFES ED+QS L+ MNGVEVEGRALRLNLASE
Sbjct: 239 AFGDQPGVLGAKVIYERNTGRSRGFGFISFESAEDVQSALATMNGVEVEGRALRLNLASE 298
Query: 901 R-ATTEPRSSVAEGVTEEGSVGSSEVLSNIST 993
R T SV EG T++ S+ SSEVLSN+ST
Sbjct: 299 RERPTVSPPSVEEGETKDVSLESSEVLSNVST 330
>gi|17064758|gb|AAL32533.1| ubiquitin / ribosomal protein CEP52 [Arabidopsis
thaliana]
Length = 329
Score = 481 bits (1238), Expect = 9e-134
Identities = 255/331 (77%), Positives = 276/331 (83%), Gaps = 11/331 (3%)
Frame = +1
Query: 22 MSSAYCPSLPVAVSVASTVSSSPTSNSLFSSHSNSKLFYRITPKPFKLVAKCPTPLFLHP 201
MSSAYC S VAVS A+T SS+ T N L SSHSNS+LFYR TPK FKLVA CP PL LH
Sbjct: 1 MSSAYCSS-AVAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPLILHS 59
Query: 202 NTRRHRLLCAAE-------DEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQASVEEGR 360
N RRHR CAAE DEI S EEE EE EEG+EGEE+ + + TTQAS EEGR
Sbjct: 60 NIRRHRFFCAAETEASSADDEIQASVEEE--EEVEEEGDEGEEEVEEEKQTTQASGEEGR 117
Query: 361 LYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMF 540
LYVGNLPYTITSSELSQ+FGEAG VVDVQIVYDKVTDRSRGFGFVTMG+IEEAK A+QMF
Sbjct: 118 LYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKGAMQMF 177
Query: 541 NSSQIGGRTVKVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKD 720
NSSQIGGRTVKVNFPEVPRGGE EVMRTKIRD+N SYVDSPHK+YAGNLGW+LTSQGLKD
Sbjct: 178 NSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWDLTSQGLKD 237
Query: 721 AFGDQPGVLGAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASE 900
AFGDQPGVLGAKVIYERN+GRSRGFGF+SFES E++QS L+ MNGVEVEGRALRLNLASE
Sbjct: 238 AFGDQPGVLGAKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASE 297
Query: 901 R-ATTEPRSSVAEGVTEEGSVGSSEVLSNIS 990
R T SV EG TEE S+ S+EVLSN+S
Sbjct: 298 REKPTVSPPSVEEGETEEASLESNEVLSNVS 328
>gi|681912|dbj|BAA06523.1| RNA-binding protein cp33 [Arabidopsis thaliana]
Length = 321
Score = 474 bits (1219), Expect = 1e-131
Identities = 249/321 (77%), Positives = 269/321 (83%), Gaps = 10/321 (3%)
Frame = +1
Query: 52 VAVSVASTVSSSPTSNSLFSSHSNSKLFYRITPKPFKLVAKCPTPLFLHPNTRRHRLLCA 231
VAVS A+T SS+ T N L SSHSNS+LFYR TPK FKLVA CP PL LH N RRHR CA
Sbjct: 2 VAVSAAATASSAATFNPLLSSHSNSQLFYRFTPKSFKLVANCPNPLILHSNIRRHRFFCA 61
Query: 232 AE-------DEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQASVEEGRLYVGNLPYTI 390
AE DEI S EEE EE EEG+EGEE+ + + TTQAS EE RLYVGNLPYTI
Sbjct: 62 AETEASSADDEIQASVEEE--EEVEEEGDEGEEEVEEEKQTTQASGEEWRLYVGNLPYTI 119
Query: 391 TSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTV 570
TSSELSQ+FGEAG VVDVQIVYDKVTDRSRGFGFVTMG+IEEAKEA+QMFNSSQIGGRTV
Sbjct: 120 TSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTV 179
Query: 571 KVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLG 750
KVNFPEVPRGGE EVMRTKIRD+N SYVDSPHK+YAGNLGWNLTSQGLKDAFGDQPGVLG
Sbjct: 180 KVNFPEVPRGGENEVMRTKIRDNNRSYVDSPHKVYAGNLGWNLTSQGLKDAFGDQPGVLG 239
Query: 751 AKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASER-ATTEPRSS 927
AKVIYERN+GRSRGFGF+SFES E++QS L+ MNGVEVEGRALRLNLASER T S
Sbjct: 240 AKVIYERNTGRSRGFGFISFESAENVQSALATMNGVEVEGRALRLNLASEREKPTVSPPS 299
Query: 928 VAEGVTEEGSVGSSEVLSNIS 990
V EG TEE S+ S+EVLSN+S
Sbjct: 300 VEEGETEEASLESNEVLSNVS 320
>gi|225463276|ref|XP_002264127.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 311
Score = 307 bits (786), Expect = 2e-081
Identities = 173/309 (55%), Positives = 211/309 (68%), Gaps = 11/309 (3%)
Frame = +1
Query: 55 AVSVASTVSSSPTSNSLFSSHSNSKLFYRITPKPFKLVAKCPTPLFLHPNTRRHRLLCAA 234
A + A+ SSSP SL + SKL F + K P L H L
Sbjct: 10 AAAAAAAASSSP---SLRIPYRISKLSLIPISTHFPSIPK-PLKLTTQSAHFPHHLCRTT 65
Query: 235 EDEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQASVEEGRLYVGNLPYTITSSELSQL 414
+ + P EEE+ EEE EE E+ EE+ D S E RLYVGNLPY++TSS+L +
Sbjct: 66 QHQDPQLQEEEEEEEEEEEEEQQEEEED---PKVSDSAEASRLYVGNLPYSMTSSQLGDV 122
Query: 415 FGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNFPEVP 594
F EAG+V+ V+IVYD+VTDRSRGF FVTMG+++EAKEAI+MF+ SQ+GGRTVKVNFPEVP
Sbjct: 123 FNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRTVKVNFPEVP 182
Query: 595 RGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYERN 774
RGGER VM KIR S +VDSP+KIYAGNL W LTS+GL+DAF D PG+LGAKVIYER
Sbjct: 183 RGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLLGAKVIYERE 242
Query: 775 SGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSSVAEGVTEEG 954
SGRSRGFGF+SF S E+ +S L+AMN VEVEGR LRLNLA+ RA P + G E
Sbjct: 243 SGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVRAPPAP----SPGPGLER 298
Query: 955 SVGSSEVLS 981
+V +SE++S
Sbjct: 299 NVDNSELIS 307
>gi|147769830|emb|CAN61277.1| hypothetical protein VITISV_002607 [Vitis
vinifera]
Length = 454
Score = 307 bits (784), Expect = 4e-081
Identities = 169/318 (53%), Positives = 218/318 (68%), Gaps = 11/318 (3%)
Frame = +1
Query: 49 PVAVSVASTVSSSPTSNSLFSSHSNSKLFYRITPKPFKLVA----KCPTPLFLHPNTRR- 213
P ++S +S ++ + + SS + ++ YRI+ ++ P PL L +
Sbjct: 137 PTSMSASSLNMAAAAAAAAASSSPSLRIPYRISKLSLIPISTHFPSIPKPLKLTTQSAHF 196
Query: 214 -HRLLCAAEDEIPPSSEEEDYEEENEEGEEGEEDADGTQ-TTTQASVEEGRLYVGNLPYT 387
H L + + P EEE+ EEE EE EE EE + + S E RLYVGNLPY+
Sbjct: 197 PHHLCRXTQHQDPQLQEEEEEEEEEEEEEEEEEQQEEEEDPKVSDSAEASRLYVGNLPYS 256
Query: 388 ITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRT 567
+TSS+L +F EAG+V+ V+IVYD+VTDRSRGF FVTMG+++EAKEAI+MF+ SQ+GGRT
Sbjct: 257 MTSSQLGXVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRT 316
Query: 568 VKVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVL 747
VKVNFPEVPRGGER VM KIR S +VDSP+KIYAGNL W LTS+GL+DAF D PG+L
Sbjct: 317 VKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADXPGLL 376
Query: 748 GAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSS 927
GAKVIYER SGRSRGFGF+SF S E+ +S L+AM+ VEVEGR LRLNLA+ RA P
Sbjct: 377 GAKVIYERESGRSRGFGFLSFASAENAESALNAMBEVEVEGRPLRLNLAAVRAPPAP--- 433
Query: 928 VAEGVTEEGSVGSSEVLS 981
+ G E +V +SE++S
Sbjct: 434 -SPGPGLERNVDNSELIS 450
>gi|224138286|ref|XP_002322776.1| predicted protein [Populus trichocarpa]
Length = 324
Score = 292 bits (747), Expect = 8e-077
Identities = 150/251 (59%), Positives = 192/251 (76%), Gaps = 11/251 (4%)
Frame = +1
Query: 229 AAEDEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQASVEEGRLYVGNLPYTITSSELS 408
AA+D+ P SE +++++E E EE EED + EEG+LYVGNLPY++TSSEL+
Sbjct: 81 AAQDD--PQSETDEFDQEIVEEEEEEEDVVAIKAR-----EEGKLYVGNLPYSMTSSELA 133
Query: 409 QLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNFPE 588
++F EAG V +++ D+VTDRSRGFGFVTM ++EEAKEAI+MFN SQ+GGRT++VNFPE
Sbjct: 134 EVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRTLRVNFPE 193
Query: 589 VPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYE 768
VPRGGEREVM +IR ++DS HKIYAGNLGW LTS+GL DAF +QPG+L AKVIYE
Sbjct: 194 VPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGLLSAKVIYE 253
Query: 769 RNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSSVAEGVTE 948
R++GRSRGFGFVSF+S E+ ++ L AMNG EV+GR LRLNLA ER+ P A+
Sbjct: 254 RDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGERSYPPP----AKENNT 309
Query: 949 EGSVGSSEVLS 981
E ++ SSE+LS
Sbjct: 310 EDNLESSELLS 320
>gi|311952|emb|CAA41253.1| 33 kd chloroplast ribonucleoprotein [Nicotiana
sylvestris]
Length = 319
Score = 290 bits (742), Expect = 3e-076
Identities = 146/254 (57%), Positives = 189/254 (74%), Gaps = 2/254 (0%)
Frame = +1
Query: 226 CAAEDEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQASVEEGRLYVGNLPYTITSSEL 405
CA+ + +E+D EE EE EE + ++ SVE GRLYVGNLP+++TSS+L
Sbjct: 66 CASVSDGVEVVQEDDEEEVALSAEEEEEIEEKEESVESESVEGGRLYVGNLPFSMTSSQL 125
Query: 406 SQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNFP 585
S++F EAG V +V+IVYD+VTDRSRGF FVTMG++EEAKEAI++F+ SQ+GGRTVKVNFP
Sbjct: 126 SEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFP 185
Query: 586 EVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIY 765
EVPRGGEREVM KIR + +VDSPHK+Y NL W LTSQGL+DAF DQPG + AKVIY
Sbjct: 186 EVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIY 245
Query: 766 ERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSSVAEGVT 945
+R+SGRSRGFGF++F S E ++S L MN VE+EGR LRLN+A ++A S V +
Sbjct: 246 DRSSGRSRGFGFITFSSAEAMKSALDTMNEVELEGRPLRLNVAGQKAPLSSPSVVE--TS 303
Query: 946 EEGSVGSSEVLSNI 987
E ++E+LS++
Sbjct: 304 PENDSENNELLSSL 317
>gi|224091455|ref|XP_002309257.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 290 bits (741), Expect = 4e-076
Identities = 150/261 (57%), Positives = 194/261 (74%), Gaps = 10/261 (3%)
Frame = +1
Query: 214 HRLLCAAEDEIPPSSEE-----EDYEEENEEGEEGEEDADGTQTTTQASVEEGRLYVGNL 378
H + A+ D +EE +D + E +E ++ + +G +A+ EEG+LYVGNL
Sbjct: 62 HGIFAASSDSFESGTEENTTALDDPQSETDEFDQEIVEEEGDVEAIKAT-EEGKLYVGNL 120
Query: 379 PYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIG 558
PY++TSSEL+++F EAG V +++YD+VTDRSRGFGFVTMG++EEAK+AIQMFN +Q G
Sbjct: 121 PYSMTSSELTEVFEEAGRVFSAEVIYDRVTDRSRGFGFVTMGSVEEAKKAIQMFNGTQFG 180
Query: 559 GRTVKVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQP 738
GR+V+VNFPEVPRGGEREVM +I+ ++DS HKIYAGNLGW LTS+GL+DAF +QP
Sbjct: 181 GRSVRVNFPEVPRGGEREVMGPRIQSGYKGFIDSEHKIYAGNLGWRLTSEGLRDAFANQP 240
Query: 739 GVLGAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEP 918
GVL AKVIYER+S RSRGFGFVSFES E+ ++ L AMNG EVEGR +RLNLA ER+ P
Sbjct: 241 GVLSAKVIYERDSRRSRGFGFVSFESAENAEAALEAMNGEEVEGRPMRLNLAGERS---P 297
Query: 919 RSSVAEGVTEEGSVGSSEVLS 981
S E T E ++ S E+LS
Sbjct: 298 PPSAKENNT-ENNLESGELLS 317
>gi|133249|sp|P19684.1|ROC5_NICSY RecName: Full=33 kDa ribonucleoprotein,
chloroplastic; Flags: Precursor
Length = 324
Score = 289 bits (739), Expect = 7e-076
Identities = 146/254 (57%), Positives = 186/254 (73%), Gaps = 2/254 (0%)
Frame = +1
Query: 226 CAAEDEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQASVEEGRLYVGNLPYTITSSEL 405
CA+ + +E+D EE EE EE + + SVE GRLYVGNLP+++TSS+L
Sbjct: 71 CASVSDGVEVVQEDDEEEVALSAEEEEEIEEKEERVESESVEGGRLYVGNLPFSMTSSQL 130
Query: 406 SQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNFP 585
S++F EAG V +V+IVYD+VTDRSRGF FVTMG++EEAKEAI++F+ SQ+GGRTVKVNFP
Sbjct: 131 SEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFP 190
Query: 586 EVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIY 765
EVPRGGEREVM KIR + +VDSPHK+Y NL W LTSQGL+DAF DQPG + AKVIY
Sbjct: 191 EVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIY 250
Query: 766 ERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSSVAEGVT 945
+R+SGRSRGFGF++F S E + S L MN VE+EGR LRLN+A ++A S +
Sbjct: 251 DRSSGRSRGFGFITFSSAEAMNSALDTMNEVELEGRPLRLNVAGQKAPVS--SPPVVETS 308
Query: 946 EEGSVGSSEVLSNI 987
E +SE+LS++
Sbjct: 309 PENDSDNSELLSSL 322
>gi|20009|emb|CAA43429.1| ribonucleoprotein [Nicotiana tabacum]
Length = 292
Score = 267 bits (682), Expect = 3e-069
Identities = 130/211 (61%), Positives = 163/211 (77%)
Frame = +1
Query: 226 CAAEDEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQASVEEGRLYVGNLPYTITSSEL 405
CA+ + +E+D EE EE EE + ++ SVE GRLYVGNLP+++TSS+L
Sbjct: 60 CASVSDGVEVVQEDDEEEVALSAEEEEEIEEKEESVESESVEGGRLYVGNLPFSMTSSQL 119
Query: 406 SQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNFP 585
S++F EAG V +V+IVYD+VTDRSRGF FVTMG++EEAKEAI++F+ SQ+GGRTVKVNFP
Sbjct: 120 SEIFAEAGTVANVEIVYDRVTDRSRGFAFVTMGSVEEAKEAIRLFDGSQVGGRTVKVNFP 179
Query: 586 EVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIY 765
EVPRGGEREVM KIR + +VDSPHK+Y NL W LTSQGL+DAF DQPG + AKVIY
Sbjct: 180 EVPRGGEREVMSAKIRSTYQGFVDSPHKLYVANLSWALTSQGLRDAFADQPGFMSAKVIY 239
Query: 766 ERNSGRSRGFGFVSFESEEDLQSGLSAMNGV 858
+R+SGRSRGFGF++F S E ++S L MN V
Sbjct: 240 DRSSGRSRGFGFITFSSAEAMKSALDTMNEV 270
>gi|296089370|emb|CBI39142.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 261 bits (665), Expect = 3e-067
Identities = 132/198 (66%), Positives = 160/198 (80%), Gaps = 4/198 (2%)
Frame = +1
Query: 388 ITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRT 567
+TSS+L +F EAG+V+ V+IVYD+VTDRSRGF FVTMG+++EAKEAI+MF+ SQ+GGRT
Sbjct: 1 MTSSQLGDVFNEAGSVISVEIVYDRVTDRSRGFAFVTMGSVQEAKEAIRMFDGSQVGGRT 60
Query: 568 VKVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVL 747
VKVNFPEVPRGGER VM KIR S +VDSP+KIYAGNL W LTS+GL+DAF D PG+L
Sbjct: 61 VKVNFPEVPRGGERAVMGPKIRSSYRGFVDSPYKIYAGNLSWRLTSEGLRDAFADHPGLL 120
Query: 748 GAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSS 927
GAKVIYER SGRSRGFGF+SF S E+ +S L+AMN VEVEGR LRLNLA+ RA P
Sbjct: 121 GAKVIYERESGRSRGFGFLSFASAENAESALNAMNEVEVEGRPLRLNLAAVRAPPAP--- 177
Query: 928 VAEGVTEEGSVGSSEVLS 981
+ G E +V +SE++S
Sbjct: 178 -SPGPGLERNVDNSELIS 194
>gi|118487510|gb|ABK95582.1| unknown [Populus trichocarpa]
Length = 198
Score = 253 bits (645), Expect = 5e-065
Identities = 126/198 (63%), Positives = 158/198 (79%), Gaps = 4/198 (2%)
Frame = +1
Query: 388 ITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRT 567
+TSSEL+++F EAG V +++ D+VTDRSRGFGFVTM ++EEAKEAI+MFN SQ+GGRT
Sbjct: 1 MTSSELAEVFEEAGRVFGAEVICDRVTDRSRGFGFVTMESVEEAKEAIRMFNGSQVGGRT 60
Query: 568 VKVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVL 747
++VNFPEVPRGGEREVM +IR ++DS HKIYAGNLGW LTS+GL DAF +QPG+L
Sbjct: 61 LRVNFPEVPRGGEREVMEPRIRSGYKGFIDSEHKIYAGNLGWRLTSEGLGDAFANQPGLL 120
Query: 748 GAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSS 927
AKVIYER++GRSRGFGFVSF+S E+ ++ L AMNG EV+GR LRLNLA ER+ P
Sbjct: 121 SAKVIYERDTGRSRGFGFVSFDSAENAEAALEAMNGEEVDGRPLRLNLAGERSYPPP--- 177
Query: 928 VAEGVTEEGSVGSSEVLS 981
A+ E ++ SSE+LS
Sbjct: 178 -AKENNTEDNLESSELLS 194
>gi|326511132|dbj|BAJ87580.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 344
Score = 247 bits (628), Expect = 5e-063
Identities = 134/277 (48%), Positives = 174/277 (62%), Gaps = 11/277 (3%)
Frame = +1
Query: 196 HPNTRRHRLLCAAEDEIPPSSEEEDYEEENEEGEEGEEDADGT------QTTTQASVEEG 357
HP A+ E E E EEGEE E + + + E G
Sbjct: 49 HPILLPASASAASGQEFSSDGEYYSEEYVEEEGEEAEPEVEAVRGYYPPRNRPALGQEPG 108
Query: 358 RLYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQM 537
R+YVGNLPYT T++EL+ F EAG+V DVQI+YDK+TDRSRGF FVTM T EEA +A+QM
Sbjct: 109 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQM 168
Query: 538 FNSSQIGGRTVKVNFPEVPRGGEREVMRTKI-RDSNGSYVDSPHKIYAGNLGWNLTSQGL 714
FN + +GGRTV+VNFPEVPRGGER V + R S D +K+YAGNLGW + + L
Sbjct: 169 FNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYAGNLGWGVRADAL 228
Query: 715 KDAFGDQPGVLGAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLA 894
K AF QPG++GA+VI+ER++GRSRGFGFVSF + +D ++ L AM+GVE++GR LRL+LA
Sbjct: 229 KTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLA 288
Query: 895 SER----ATTEPRSSVAEGVTEEGSVGSSEVLSNIST 993
++ +T S E GS +V +N ST
Sbjct: 289 AQNPPAGSTPSTAQSQQEKTASRGSEAEPQVDNNTST 325
>gi|115470657|ref|NP_001058927.1| Os07g0158300 [Oryza sativa Japonica Group]
Length = 348
Score = 245 bits (625), Expect = 1e-062
Identities = 138/274 (50%), Positives = 175/274 (63%), Gaps = 12/274 (4%)
Frame = +1
Query: 235 EDEIPPSSEEEDYEEENEEGEEGEEDADGT----------QTTTQASVEEGRLYVGNLPY 384
E+E EEE E EE E+GEE+ ++ E GRL+VGNLPY
Sbjct: 68 EEEYANEEEEEGEEYVEEEEEDGEEEEAAAVAAPRGYYPPRSRPALGQEPGRLFVGNLPY 127
Query: 385 TITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGR 564
T+TS E+SQ F EAG V +VQI+YDKVTDRSRGF FVTM T EEA AIQMFN + +GGR
Sbjct: 128 TMTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGR 187
Query: 565 TVKVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGV 744
T +VN+PEVPRGGER V N D KIYAGNLGW + + L+ AF QPG+
Sbjct: 188 TARVNYPEVPRGGERAVGSAAATREN-RRDDGTFKIYAGNLGWGVRADALRAAFEGQPGL 246
Query: 745 LGAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRS 924
L A+VI+ER+SGRSRGFGFVSF + ED Q+ L A++GVE+EGR LRL++A + T S
Sbjct: 247 LDARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSMAEQNPTAGSPS 306
Query: 925 SVAEGVTEEGSVGSSEVLSNIST*SGKSKVDSSE 1026
+V + EE + SS+ + S S S+ ++ E
Sbjct: 307 TV-QSQEEETASESSDAETEQSITSEPSEAETEE 339
>gi|3550485|emb|CAA11894.1| cp33Hv [Hordeum vulgare subsp. vulgare]
Length = 344
Score = 244 bits (622), Expect = 2e-062
Identities = 130/266 (48%), Positives = 170/266 (63%), Gaps = 7/266 (2%)
Frame = +1
Query: 196 HPNTRRHRLLCAAEDEIPPSSEEEDYEEENEEGEEGEEDADGT------QTTTQASVEEG 357
HP A+ E E E EEGEE E + + + E G
Sbjct: 49 HPILLPASASAASGQEFSSDGEYYSEEYVEEEGEEAEPEVEAVRGYYPPRNRPALGQEPG 108
Query: 358 RLYVGNLPYTITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQM 537
R+YVGNLPYT T++EL+ F EAG+V DVQI+YDK+TDRSRGF FVTM T EEA +A+QM
Sbjct: 109 RIYVGNLPYTFTAAELTAAFSEAGSVDDVQIIYDKITDRSRGFAFVTMATAEEAAKAVQM 168
Query: 538 FNSSQIGGRTVKVNFPEVPRGGEREVMRTKI-RDSNGSYVDSPHKIYAGNLGWNLTSQGL 714
FN + +GGRTV+VNFPEVPRGGER V + R S D +K+YAGNLGW + + L
Sbjct: 169 FNGALLGGRTVRVNFPEVPRGGERAVASAAVARTSLRVVDDGTYKVYAGNLGWGVRADAL 228
Query: 715 KDAFGDQPGVLGAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLA 894
K AF QPG++GA+VI+ER++GRSRGFGFVSF + +D ++ L AM+GVE++GR LRL+LA
Sbjct: 229 KTAFEGQPGLVGARVIFERDTGRSRGFGFVSFHTIQDAKAALQAMDGVELDGRPLRLSLA 288
Query: 895 SERATTEPRSSVAEGVTEEGSVGSSE 972
++ S A+ E+ + SE
Sbjct: 289 AQNPPAGSTPSTAQSQQEKTASRGSE 314
>gi|226497258|ref|NP_001140274.1| hypothetical protein LOC100272318 [Zea mays]
Length = 341
Score = 232 bits (591), Expect = 1e-058
Identities = 123/249 (49%), Positives = 165/249 (66%), Gaps = 12/249 (4%)
Frame = +1
Query: 238 DEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQ------ASVEEGRLYVGNLPYTITSS 399
D+ EE ++E EEG E EE+A+ + + + GRL+VGNLPYT TS
Sbjct: 69 DDFSGDDGEEHFDE--EEGSEPEEEAEAPRAYSSPRSRPPRGDDPGRLFVGNLPYTYTSE 126
Query: 400 ELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVN 579
EL+Q+F EAG V D QI+YDKVT+RSRGF FVTM T EEA +AIQMF+ + +GGRT +VN
Sbjct: 127 ELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVN 186
Query: 580 FPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKV 759
+PEVPRGGER + R + D +KIYAGNLGW + + L++ F + G+L A+V
Sbjct: 187 YPEVPRGGERRTVTMSGRRRD----DGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARV 242
Query: 760 IYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSSVAEG 939
I+ER +GRSRGFGFVSF + ED Q+ L +++GVE+EGR+LRL+LA + S A+
Sbjct: 243 IFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRSLRLSLAEQNPPPGSPPSTAQA 302
Query: 940 VTEEGSVGS 966
EE G+
Sbjct: 303 QQEETDSGA 311
>gi|242047468|ref|XP_002461480.1| hypothetical protein SORBIDRAFT_02g003310
[Sorghum bicolor]
Length = 338
Score = 232 bits (590), Expect = 1e-058
Identities = 128/266 (48%), Positives = 174/266 (65%), Gaps = 16/266 (6%)
Frame = +1
Query: 253 SSEEEDYEEENEEGEEGEEDADG------TQTTTQASVEEGRLYVGNLPYTITSSELSQL 414
S+ +E ++E EE E EE+A+ ++ + GRL+VGNLPYT TS EL+Q+
Sbjct: 72 STGDEYFDE--EEASESEEEAEAPRAYSPPRSRPTRGDDPGRLFVGNLPYTYTSEELAQV 129
Query: 415 FGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVNFPEVP 594
F EAG V D QI+YDKVT+RSRGF FVTM T EEA +AIQMF+ + +GGRT +VN+PEVP
Sbjct: 130 FAEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVNYPEVP 189
Query: 595 RGGERE--VMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKVIYE 768
RGGER M + RD D +KIYAGNLGW + + L++ F + G+L A+VI+E
Sbjct: 190 RGGERRTVTMAGRRRD------DGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARVIFE 243
Query: 769 RNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSSVAEGVTE 948
R +GRSRGFGFVSF + ED Q+ L A++GVE+EGR LRL+LA + S A+ E
Sbjct: 244 RETGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSLAEQNPPPGSPPSNAQAQQE 303
Query: 949 EGSVGSSEVLSNIST*SGKSKVDSSE 1026
E G+S+ + + + S S+ + E
Sbjct: 304 ETDSGASDAETEVVSSSELSEAELDE 329
>gi|195611722|gb|ACG27691.1| ribonucleoprotein [Zea mays]
Length = 341
Score = 231 bits (589), Expect = 2e-058
Identities = 123/249 (49%), Positives = 164/249 (65%), Gaps = 12/249 (4%)
Frame = +1
Query: 238 DEIPPSSEEEDYEEENEEGEEGEEDADGTQTTTQ------ASVEEGRLYVGNLPYTITSS 399
D+ EE ++E EEG E EE+A+ + + + GRL+VGNLPYT TS
Sbjct: 69 DDFSGDDGEEHFDE--EEGSEPEEEAEAPRAYSSPRSRPPRGDDPGRLFVGNLPYTYTSE 126
Query: 400 ELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRTVKVN 579
EL+Q+F EAG V D QI+YDKVT+RSRGF FVTM T EEA +AIQMF+ + +GGRT +VN
Sbjct: 127 ELAQVFSEAGRVDDAQIIYDKVTNRSRGFAFVTMATAEEAAKAIQMFDGALLGGRTARVN 186
Query: 580 FPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVLGAKV 759
+PEVPRGGER + R + D +KIYAGNLGW + + L++ F + G+L A+V
Sbjct: 187 YPEVPRGGERRTVTMSGRRRD----DGTYKIYAGNLGWGVRADTLRNVFEGRAGLLDARV 242
Query: 760 IYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSSVAEG 939
I+ER +GRSRGFGFVSF + ED Q+ L +++GVE+EGR LRL+LA + S A+
Sbjct: 243 IFERETGRSRGFGFVSFSTAEDAQAALESLDGVELEGRPLRLSLAEQNPPPGSPPSTAQA 302
Query: 940 VTEEGSVGS 966
EE G+
Sbjct: 303 QQEETDSGA 311
>gi|125599171|gb|EAZ38747.1| hypothetical protein OsJ_23149 [Oryza sativa
Japonica Group]
Length = 220
Score = 212 bits (538), Expect = 1e-052
Identities = 115/213 (53%), Positives = 146/213 (68%), Gaps = 2/213 (0%)
Frame = +1
Query: 388 ITSSELSQLFGEAGNVVDVQIVYDKVTDRSRGFGFVTMGTIEEAKEAIQMFNSSQIGGRT 567
+TS E+SQ F EAG V +VQI+YDKVTDRSRGF FVTM T EEA AIQMFN + +GGRT
Sbjct: 1 MTSGEISQTFSEAGRVDNVQIIYDKVTDRSRGFAFVTMATAEEAATAIQMFNGALLGGRT 60
Query: 568 VKVNFPEVPRGGEREVMRTKIRDSNGSYVDSPHKIYAGNLGWNLTSQGLKDAFGDQPGVL 747
+VN+PEVPRGGER V N D KIYAGNLGW + + L+ AF QPG+L
Sbjct: 61 ARVNYPEVPRGGERAVGSAAATREN-RRDDGTFKIYAGNLGWGVRADALRAAFEGQPGLL 119
Query: 748 GAKVIYERNSGRSRGFGFVSFESEEDLQSGLSAMNGVEVEGRALRLNLASERATTEPRSS 927
A+VI+ER+SGRSRGFGFVSF + ED Q+ L A++GVE+EGR LRL++A + T S+
Sbjct: 120 DARVIFERDSGRSRGFGFVSFRTAEDAQAALEALDGVELEGRPLRLSMAEQNPTAGSPST 179
Query: 928 VAEGVTEEGSVGSSEVLSNIST*SGKSKVDSSE 1026
V + EE + SS+ + S S S+ ++ E
Sbjct: 180 V-QSQEEETASESSDAETEQSITSEPSEAETEE 211
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 633,410,340,094
Number of Sequences: 15229318
Number of Extensions: 633410340094
Number of Successful Extensions: 173938820
Number of sequences better than 0.0: 0
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