BLASTX 7.6.2

Query= UN05644 /QuerySize=1063
        (1062 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G21350.1 | Symbols:  | RNA polymerase transcri...    444   5e-125
TAIR9_protein||AT3G21350.2 | Symbols:  | RNA polymerase transcri...    295   4e-080

>TAIR9_protein||AT3G21350.1 | Symbols:  | RNA polymerase transcriptional
        regulation mediator-related | chr3:7517106-7518587 FORWARD

          Length = 258

 Score =  444 bits (1141), Expect = 5e-125
 Identities = 217/260 (83%), Positives = 238/260 (91%), Gaps = 2/260 (0%)
 Frame = -1

Query: 1023 MDASLPSSAPADTFNGGNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFA 844
            MD+SL S+A ADTFN GNA +QI PPLQPPGTDMTGI FRDQLWINSYPLDRNY+FDYFA
Sbjct:    1 MDSSLLSAATADTFN-GNAADQIPPPLQPPGTDMTGISFRDQLWINSYPLDRNYIFDYFA 59

Query:  843 LSPFYDITCNNEVLRRRSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVT 664
            LSPFYD TCNNE+LRRRS+HPLD S LSKMTGLEY+++DATEPNLFVFRKQKRDGPEKVT
Sbjct:   60 LSPFYDTTCNNEILRRRSIHPLDLSHLSKMTGLEYMLTDATEPNLFVFRKQKRDGPEKVT 119

Query:  663 PMLTYYILDGTIYQAPQLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASE 484
            PMLTYYILDG+IYQAPQLCSVFAARV R +Y+IS AF+ AASKLETI+QVD ++QNE +E
Sbjct:  120 PMLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAASKLETIRQVDTENQNEPAE 179

Query:  483 TKPASETVDLKEVKRVDLILKSLYSKLPPAPPPPPFPEGYVSQEALGEKEEELGTQGGES 304
            +KPASETVDLKE+KRVD+IL SLY KL P PPPPPFPEGYVSQEALGEK EELGTQGGES
Sbjct:  180 SKPASETVDLKEMKRVDVILTSLYRKLAPPPPPPPFPEGYVSQEALGEK-EELGTQGGES 238

Query:  303 QQPQIDPIIDQGPAKRMKF* 244
            Q PQ+DPIIDQGPAKRMKF*
Sbjct:  239 QPPQVDPIIDQGPAKRMKF* 258

>TAIR9_protein||AT3G21350.2 | Symbols:  | RNA polymerase transcriptional
        regulation mediator-related | chr3:7517106-7518587 FORWARD

          Length = 299

 Score =  295 bits (754), Expect = 4e-080
 Identities = 142/169 (84%), Positives = 156/169 (92%), Gaps = 1/169 (0%)
 Frame = -1

Query: 1023 MDASLPSSAPADTFNGGNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFA 844
            MD+SL S+A ADTFN GNA +QI PPLQPPGTDMTGI FRDQLWINSYPLDRNY+FDYFA
Sbjct:    1 MDSSLLSAATADTFN-GNAADQIPPPLQPPGTDMTGISFRDQLWINSYPLDRNYIFDYFA 59

Query:  843 LSPFYDITCNNEVLRRRSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVT 664
            LSPFYD TCNNE+LRRRS+HPLD S LSKMTGLEY+++DATEPNLFVFRKQKRDGPEKVT
Sbjct:   60 LSPFYDTTCNNEILRRRSIHPLDLSHLSKMTGLEYMLTDATEPNLFVFRKQKRDGPEKVT 119

Query:  663 PMLTYYILDGTIYQAPQLCSVFAARVGRAVYHISNAFSVAASKLETIKQ 517
            PMLTYYILDG+IYQAPQLCSVFAARV R +Y+IS AF+ AASKLETI+Q
Sbjct:  120 PMLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAASKLETIRQ 168


 Score =  152 bits (383), Expect = 4e-037
 Identities = 74/90 (82%), Positives = 81/90 (90%), Gaps = 1/90 (1%)
 Frame = -1

Query: 513 DAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKLPPAPPPPPFPEGYVSQEALGEKE 334
           D ++QNE +E+KPASETVDLKE+KRVD+IL SLY KL P PPPPPFPEGYVSQEALGEK 
Sbjct: 211 DTENQNEPAESKPASETVDLKEMKRVDVILTSLYRKLAPPPPPPPFPEGYVSQEALGEK- 269

Query: 333 EELGTQGGESQQPQIDPIIDQGPAKRMKF* 244
           EELGTQGGESQ PQ+DPIIDQGPAKRMKF*
Sbjct: 270 EELGTQGGESQPPQVDPIIDQGPAKRMKF* 299

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,494,594,153
Number of Sequences: 33410
Number of Extensions: 3494594153
Number of Successful Extensions: 126829027
Number of sequences better than 0.0: 0