BLASTX 7.6.2
Query= UN05644 /QuerySize=1063
(1062 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9LIG1|Q9LIG1_ARATH Putative uncharacterized protein At3g2135... 439 2e-121
tr|B9N9I3|B9N9I3_POPTR Predicted protein (Fragment) OS=Populus t... 352 6e-095
tr|B9RQ93|B9RQ93_RICCO RNA polymerase II mediator complex subuni... 343 3e-092
tr|A5AE97|A5AE97_VITVI Putative uncharacterized protein OS=Vitis... 339 3e-091
tr|B8B401|B8B401_ORYSI Putative uncharacterized protein OS=Oryza... 323 3e-086
tr|Q69TG3|Q69TG3_ORYSJ Os06g0217500 protein OS=Oryza sativa subs... 320 2e-085
tr|C5Z6K4|C5Z6K4_SORBI Putative uncharacterized protein Sb10g007... 312 5e-083
tr|B4FN85|B4FN85_MAIZE Putative uncharacterized protein OS=Zea m... 312 7e-083
tr|A9RVG1|A9RVG1_PHYPA Predicted protein (Fragment) OS=Physcomit... 230 4e-058
tr|B9FS73|B9FS73_ORYSJ Putative uncharacterized protein OS=Oryza... 206 3e-051
tr|D5AAZ6|D5AAZ6_PICSI Putative uncharacterized protein OS=Picea... 193 3e-047
tr|C3XZM7|C3XZM7_BRAFL Putative uncharacterized protein (Fragmen... 114 3e-023
tr|B3DLE4|B3DLE4_XENTR Mediator of RNA polymerase II transcripti... 108 2e-021
tr|B5FYR7|B5FYR7_TAEGU Putative mediator of RNA polymerase II tr... 106 5e-021
tr|B4E2P0|B4E2P0_HUMAN cDNA FLJ59149, highly similar to RNA poly... 104 2e-020
tr|B0BNE1|B0BNE1_RAT Mediator complex subunit 6 OS=Rattus norveg... 104 2e-020
tr|C1C411|C1C411_RANCA Mediator of RNA polymerase II transcripti... 104 2e-020
tr|B3S0T2|B3S0T2_TRIAD Putative uncharacterized protein (Fragmen... 104 3e-020
tr|D2HVR5|D2HVR5_AILME Putative uncharacterized protein (Fragmen... 103 4e-020
tr|A8K3N2|A8K3N2_HUMAN cDNA FLJ76264, highly similar to Homo sap... 103 5e-020
>tr|Q9LIG1|Q9LIG1_ARATH Putative uncharacterized protein At3g21350
OS=Arabidopsis thaliana GN=At3g21350 PE=1 SV=1
Length = 257
Score = 439 bits (1129), Expect = 2e-121
Identities = 215/257 (83%), Positives = 236/257 (91%), Gaps = 2/257 (0%)
Frame = -1
Query: 1020 DASLPSSAPADTFNGGNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFAL 841
D+SL S+A ADTFN GNA +QI PPLQPPGTDMTGI FRDQLWINSYPLDRNY+FDYFAL
Sbjct: 2 DSSLLSAATADTFN-GNAADQIPPPLQPPGTDMTGISFRDQLWINSYPLDRNYIFDYFAL 60
Query: 840 SPFYDITCNNEVLRRRSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTP 661
SPFYD TCNNE+LRRRS+HPLD S LSKMTGLEY+++DATEPNLFVFRKQKRDGPEKVTP
Sbjct: 61 SPFYDTTCNNEILRRRSIHPLDLSHLSKMTGLEYMLTDATEPNLFVFRKQKRDGPEKVTP 120
Query: 660 MLTYYILDGTIYQAPQLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASET 481
MLTYYILDG+IYQAPQLCSVFAARV R +Y+IS AF+ AASKLETI+QVD ++QNE +E+
Sbjct: 121 MLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAASKLETIRQVDTENQNEPAES 180
Query: 480 KPASETVDLKEVKRVDLILKSLYSKLPPAPPPPPFPEGYVSQEALGEKEEELGTQGGESQ 301
KPASETVDLKE+KRVD+IL SLY KL P PPPPPFPEGYVSQEALGEK EELGTQGGESQ
Sbjct: 181 KPASETVDLKEMKRVDVILTSLYRKLAPPPPPPPFPEGYVSQEALGEK-EELGTQGGESQ 239
Query: 300 QPQIDPIIDQGPAKRMK 250
PQ+DPIIDQGPAKRMK
Sbjct: 240 PPQVDPIIDQGPAKRMK 256
>tr|B9N9I3|B9N9I3_POPTR Predicted protein (Fragment) OS=Populus trichocarpa
GN=POPTRDRAFT_276485 PE=4 SV=1
Length = 235
Score = 352 bits (901), Expect = 6e-095
Identities = 169/235 (71%), Positives = 191/235 (81%)
Frame = -1
Query: 951 PPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEVLRRRSVHPLDH 772
PP QPPGTDMTGICFRDQLW+N+YPLDRN VFDYFALSPFYD TCNNE LR +S+HPLD
Sbjct: 1 PPQQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTCNNEQLRSQSIHPLDL 60
Query: 771 SQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAA 592
S L KMTG EY++S+ EP+LFVFRKQKRD EKVTPMLTYY+LDG+IYQAPQLCSVFAA
Sbjct: 61 SHLLKMTGTEYMLSEVMEPHLFVFRKQKRDSAEKVTPMLTYYVLDGSIYQAPQLCSVFAA 120
Query: 591 RVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLY 412
RVGRA+Y+IS AF AASKLE I VD++++ ASE+K E +D KEVKR+D IL SL
Sbjct: 121 RVGRALYYISKAFGTAASKLEKIGYVDSENEGAASESKTGKEVIDFKEVKRIDHILASLQ 180
Query: 411 SKLPPAPPPPPFPEGYVSQEALGEKEEELGTQGGESQQPQIDPIIDQGPAKRMKF 247
KLPPAPPPP FPEGYV Q E++ QGGE Q P +DPIIDQGPAKRMKF
Sbjct: 181 RKLPPAPPPPSFPEGYVPQPTTEEEKGPETQQGGEPQLPSVDPIIDQGPAKRMKF 235
>tr|B9RQ93|B9RQ93_RICCO RNA polymerase II mediator complex subunit, putative
OS=Ricinus communis GN=RCOM_1486710 PE=4 SV=1
Length = 251
Score = 343 bits (878), Expect = 3e-092
Identities = 166/241 (68%), Positives = 193/241 (80%), Gaps = 2/241 (0%)
Frame = -1
Query: 966 GEQIAP-PLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEVLRRRS 790
G +AP P QPPGTDMTGICFRDQLW+N+YPLDRN +FDYFALSPFYD TCNNE LR +S
Sbjct: 12 GNPLAPAPPQPPGTDMTGICFRDQLWLNTYPLDRNLIFDYFALSPFYDWTCNNEQLRLQS 71
Query: 789 VHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQL 610
+HPLD S LSKMTG EY++++ EPNLFV RKQKRD PEKVTPMLTYY+LDG+IYQAPQL
Sbjct: 72 IHPLDLSHLSKMTGTEYMLNEVIEPNLFVIRKQKRDSPEKVTPMLTYYVLDGSIYQAPQL 131
Query: 609 CSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDL 430
C+VFAAR+GRA+YHIS AF+ AASKLE I VD + + ASE+K E +D KEVKR+D
Sbjct: 132 CNVFAARIGRALYHISKAFTTAASKLEKIGYVD-EGEGVASESKVGKEVIDFKEVKRIDH 190
Query: 429 ILKSLYSKLPPAPPPPPFPEGYVSQEALGEKEEELGTQGGESQQPQIDPIIDQGPAKRMK 250
IL S+ KLPPAPPPPPFPEGYV + ++ Q E+Q P +DPIIDQGPAKRMK
Sbjct: 191 ILASIQRKLPPAPPPPPFPEGYVPPATVEAEKGSETRQAVETQPPPVDPIIDQGPAKRMK 250
Query: 249 F 247
F
Sbjct: 251 F 251
>tr|A5AE97|A5AE97_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_044247 PE=4 SV=1
Length = 253
Score = 339 bits (869), Expect = 3e-091
Identities = 172/246 (69%), Positives = 191/246 (77%), Gaps = 4/246 (1%)
Frame = -1
Query: 975 GNAGEQIAPPL--QPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEVL 802
GN PP PPGTDMTGICFRDQLW+NSYPLDRN VFDYFALSPFYD TCNNE L
Sbjct: 9 GNPNFDGNPPAAPTPPGTDMTGICFRDQLWLNSYPLDRNLVFDYFALSPFYDWTCNNEQL 68
Query: 801 RRRSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQ 622
R RS+HPLD S LSKMTG EY++++ EP+LFV RKQKRDGPEKVTPMLTYYILDG+IYQ
Sbjct: 69 RLRSIHPLDTSHLSKMTGTEYMLNEVMEPHLFVIRKQKRDGPEKVTPMLTYYILDGSIYQ 128
Query: 621 APQLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVK 442
APQLC+VF AR+GRA+YHIS AF+ AASKLE I VDA+++N A E+K ET+D KEV
Sbjct: 129 APQLCNVFTARIGRALYHISKAFTTAASKLEKIGYVDAENENPALESKVGKETIDFKEVM 188
Query: 441 RVDLILKSLYSKLPPAPPPPPFPEGYV-SQEALGEKEEELGTQGGESQQPQIDPIIDQGP 265
RVD IL SL KLPPAPP P FPEGY A GEK E Q E Q P +DPIIDQGP
Sbjct: 189 RVDQILASLQRKLPPAPPAPQFPEGYAPPPTAEGEKGPET-QQAAEPQLPALDPIIDQGP 247
Query: 264 AKRMKF 247
+KRMKF
Sbjct: 248 SKRMKF 253
>tr|B8B401|B8B401_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_22170 PE=4 SV=1
Length = 258
Score = 323 bits (826), Expect = 3e-086
Identities = 159/251 (63%), Positives = 186/251 (74%), Gaps = 5/251 (1%)
Frame = -1
Query: 1008 PSSAPADTFNGGNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFY 829
P+ P G G PP PPGTDMTGICFRDQLW+N+YPLDRN VFDYFALSPFY
Sbjct: 9 PAQPPPPPGAAGPDGAAALPP--PPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFY 66
Query: 828 DITCNNEVLRRRSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTY 649
D+TCNNE LR R +HPLD S L+KMTG+EYV+SD EP+LFV RKQ+R+ PEK ML Y
Sbjct: 67 DLTCNNESLRSRQIHPLDMSHLTKMTGMEYVLSDVMEPHLFVIRKQRRESPEKSNAMLAY 126
Query: 648 YILDGTIYQAPQLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPAS 469
YILDG+IYQAPQLCSVFA+R+ RA++HIS AF+ A SKLE I V+ + ASE+K
Sbjct: 127 YILDGSIYQAPQLCSVFASRISRAMHHISKAFTTACSKLEKIGHVETEPDTAASESKTQK 186
Query: 468 ETVDLKEVKRVDLILKSLYSKLPPAPPPPPFPEGYVSQEALGEKEEELGTQGGESQQPQI 289
E +DLKE+KRVD IL SL KL PAPPPPPFPEGYV E ++ L + E+ PQ+
Sbjct: 187 EAIDLKELKRVDHILMSLQRKLQPAPPPPPFPEGYVPSEQEKASDDLLAS---EALPPQV 243
Query: 288 DPIIDQGPAKR 256
DPIIDQGPAKR
Sbjct: 244 DPIIDQGPAKR 254
>tr|Q69TG3|Q69TG3_ORYSJ Os06g0217500 protein OS=Oryza sativa subsp. japonica
GN=OSJNBb0024N18.27 PE=4 SV=1
Length = 242
Score = 320 bits (820), Expect = 2e-085
Identities = 156/240 (65%), Positives = 184/240 (76%), Gaps = 5/240 (2%)
Frame = -1
Query: 969 AGEQIAPPL--QPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEVLRR 796
+G + PP PPGTDMTGICFRDQLW+N+YPLDRN VFDYFALSPFYD+TCNNE LR
Sbjct: 2 SGTPLPPPALPPPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDLTCNNESLRS 61
Query: 795 RSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAP 616
R +HPLD S L+KMTG+EYV+SD EP+LFV RKQ+R+ PEK ML YYILDG+IYQAP
Sbjct: 62 RQIHPLDMSHLTKMTGMEYVLSDVMEPHLFVIRKQRRESPEKSNAMLAYYILDGSIYQAP 121
Query: 615 QLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRV 436
QLCSVFA+R+ RA++HIS AF+ A SKLE I V+ + ASE+K E +DLKE+KRV
Sbjct: 122 QLCSVFASRISRAMHHISKAFTTACSKLEKIGHVETEPDTAASESKTQKEAIDLKELKRV 181
Query: 435 DLILKSLYSKLPPAPPPPPFPEGYVSQEALGEKEEELGTQGGESQQPQIDPIIDQGPAKR 256
D IL SL KL PAPPPPPFPEGYV E ++ L + E+ PQ+DPIIDQGPAKR
Sbjct: 182 DHILMSLQRKLQPAPPPPPFPEGYVPSEQEKASDDLLAS---EALPPQVDPIIDQGPAKR 238
>tr|C5Z6K4|C5Z6K4_SORBI Putative uncharacterized protein Sb10g007370 OS=Sorghum
bicolor GN=Sb10g007370 PE=4 SV=1
Length = 249
Score = 312 bits (798), Expect = 5e-083
Identities = 151/240 (62%), Positives = 182/240 (75%), Gaps = 4/240 (1%)
Frame = -1
Query: 975 GNAGEQIAPPLQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEVLRR 796
G G PP PPGTDMTGICFRDQLW+++YPLDRN VFDYFALSPFYDITCNNE LR
Sbjct: 10 GPDGAGALPP--PPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRS 67
Query: 795 RSVHPLDHSQLSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAP 616
R +HPLD S L+KMTG+EY++S+ EP+LFV RKQKR+ PEK PML YYILDG+IYQAP
Sbjct: 68 RQIHPLDMSHLTKMTGMEYLLSEVMEPHLFVIRKQKRESPEKSNPMLAYYILDGSIYQAP 127
Query: 615 QLCSVFAARVGRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRV 436
QLC+VFA+R+ R ++HIS AF++A SKLE I V+ +S ASE+K E +DLKE+KR+
Sbjct: 128 QLCNVFASRISRTMHHISKAFTIACSKLEKIGNVETESDAVASESKTQKEAIDLKELKRI 187
Query: 435 DLILKSLYSKLPPAPPPPPFPEGYVSQEALGEKEEELGTQGGESQQPQIDPIIDQGPAKR 256
D IL SL K+ APPPPP+PEGYV A E+E+ PQ+DPIIDQGP+KR
Sbjct: 188 DHILSSLKRKIGAAPPPPPYPEGYVPPSA--EQEKAPDDVAASEAPPQLDPIIDQGPSKR 245
>tr|B4FN85|B4FN85_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 249
Score = 312 bits (797), Expect = 7e-083
Identities = 148/230 (64%), Positives = 180/230 (78%), Gaps = 2/230 (0%)
Frame = -1
Query: 945 LQPPGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEVLRRRSVHPLDHSQ 766
L PPGTDMTGICFRDQLW+++YPLDRN VFDYFALSPFYDITCNNE LR R +HPLD S
Sbjct: 18 LPPPGTDMTGICFRDQLWLDTYPLDRNLVFDYFALSPFYDITCNNESLRSRQIHPLDMSH 77
Query: 765 LSKMTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARV 586
L+KMTG+EY++S+ EP+LFV RKQKR+ PEK +PML YYILDG+IYQAPQLC+VFA+R+
Sbjct: 78 LTKMTGMEYLLSEVMEPHLFVIRKQKRESPEKSSPMLAYYILDGSIYQAPQLCNVFASRI 137
Query: 585 GRAVYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSK 406
RA++HIS AF++A SKLE I V+ + ASE+K E +DLKE+KR+D IL SL K
Sbjct: 138 SRAMHHISKAFTIACSKLEKIGNVETEPDAVASESKTQKEAIDLKELKRIDHILSSLKRK 197
Query: 405 LPPAPPPPPFPEGYVSQEALGEKEEELGTQGGESQQPQIDPIIDQGPAKR 256
+ APPPPP+PEGYV A E+E+ PQ+DPIIDQGP+KR
Sbjct: 198 IGAAPPPPPYPEGYVPPSA--EQEKAPDDVAASEAPPQLDPIIDQGPSKR 245
>tr|A9RVG1|A9RVG1_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_47270 PE=4 SV=1
Length = 184
Score = 230 bits (584), Expect = 4e-058
Identities = 110/184 (59%), Positives = 140/184 (76%), Gaps = 1/184 (0%)
Frame = -1
Query: 936 PGTDMTGICFRDQLWINSYPLDRNYVFDYFALSPFYDITCNNEVLRRRSVHPLDHSQLSK 757
PGT+MT I FRDQLW+++YPLDRN VFDYFALSPFYD TCNNE LR ++HPLD + LSK
Sbjct: 1 PGTEMTSISFRDQLWLSAYPLDRNLVFDYFALSPFYDRTCNNEQLRMEAIHPLDMTHLSK 60
Query: 756 MTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRA 577
TG+EY++ +A EP+LFV RKQKRDGPEKV+ YY+LDG+IYQAP L +V +RV R+
Sbjct: 61 KTGMEYILHEAQEPHLFVIRKQKRDGPEKVSAQAAYYVLDGSIYQAPHLYNVIGSRVVRS 120
Query: 576 VYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKLPP 397
+YHI+NAF+ A++KLE I +A + + ++ VD+KEV RVD IL + KLPP
Sbjct: 121 LYHITNAFAQASAKLEKIGTGEA-DPADVQVKQSTTKFVDMKEVMRVDSILAGIMRKLPP 179
Query: 396 APPP 385
APPP
Sbjct: 180 APPP 183
>tr|B9FS73|B9FS73_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp.
japonica GN=OsJ_20601 PE=4 SV=1
Length = 168
Score = 206 bits (524), Expect = 3e-051
Identities = 103/167 (61%), Positives = 124/167 (74%), Gaps = 3/167 (1%)
Frame = -1
Query: 756 MTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRA 577
MTG+EYV+SD EP+LFV RKQ+R+ PEK ML YYILDG+IYQAPQLCSVFA+R+ RA
Sbjct: 1 MTGMEYVLSDVMEPHLFVIRKQRRESPEKSNAMLAYYILDGSIYQAPQLCSVFASRISRA 60
Query: 576 VYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKLPP 397
++HIS AF+ A SKLE I V+ + ASE+K E +DLKE+KRVD IL SL KL P
Sbjct: 61 MHHISKAFTTACSKLEKIGHVETEPDTAASESKTQKEAIDLKELKRVDHILMSLQRKLQP 120
Query: 396 APPPPPFPEGYVSQEALGEKEEELGTQGGESQQPQIDPIIDQGPAKR 256
APPPPPFPEGYV E ++ L + E+ PQ+DPIIDQGPAKR
Sbjct: 121 APPPPPFPEGYVPSEQEKASDDLLAS---EALPPQVDPIIDQGPAKR 164
>tr|D5AAZ6|D5AAZ6_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 166
Score = 193 bits (490), Expect = 3e-047
Identities = 98/167 (58%), Positives = 124/167 (74%), Gaps = 6/167 (3%)
Frame = -1
Query: 756 MTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRA 577
MTG+EY++++ EP+LFV RKQKRDGP+KVTPMLTYY+LDG+IYQAPQL SVFA+R+ RA
Sbjct: 1 MTGIEYMLNEVMEPHLFVIRKQKRDGPDKVTPMLTYYVLDGSIYQAPQLSSVFASRMVRA 60
Query: 576 VYHISNAFSVAASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKLPP 397
+Y+IS +F+VAASKLE I D + + ETK +E +D KEV RVD IL +L KL P
Sbjct: 61 LYYISKSFTVAASKLEKI-GYDTEGDSVKPETKAGAENIDFKEVMRVDHILTTLQRKLSP 119
Query: 396 APPPPPFPEGYVSQEALGEKEEELGTQGGESQQPQIDPIIDQGPAKR 256
APPPPPFPEG+ + + + TQ G++Q DPIIDQG AKR
Sbjct: 120 APPPPPFPEGFAAPSS-----DTAETQDGQAQNGHTDPIIDQGAAKR 161
>tr|C3XZM7|C3XZM7_BRAFL Putative uncharacterized protein (Fragment)
OS=Branchiostoma floridae GN=BRAFLDRAFT_202253 PE=4 SV=1
Length = 246
Score = 114 bits (283), Expect = 3e-023
Identities = 83/242 (34%), Positives = 122/242 (50%), Gaps = 26/242 (10%)
Frame = -1
Query: 915 ICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEVLRRRSVHPLDHSQLSKMTGLE 742
I + D WI L V DYF+ +PFYD +CNNE+++ + + P QL+ MTG+E
Sbjct: 6 ISWHDSAWIPM--LSPANVLDYFSERTNPFYDKSCNNEIIKMQRLSP---EQLNNMTGME 60
Query: 741 YVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAVYHIS 562
Y++ A EP L+V RKQ R ++VTP+ YYI+ G +YQAP L SV +R+ ++++I
Sbjct: 61 YILLHAQEPILYVVRKQHRHSQQQVTPLADYYIIAGVVYQAPDLYSVLNSRLLTSLHNIQ 120
Query: 561 NAFSVA-------ASKLETIKQVDAKSQNEASETKPASETVDLKEVKRVDLILKSLYSKL 403
+AF A SK + D + + K E + +RVD++L L K
Sbjct: 121 SAFDEALSYSRYHPSKGYWWEFKDKEDKKREGGKKKPEEMSSAFQRQRVDMLLGELADKF 180
Query: 402 PP--APP-----PPPFPE----GYVSQEALGEKEEELGTQGGESQQPQIDPIIDQGPAKR 256
PP A P P P E G + + EK E+ Q S + + + Q P KR
Sbjct: 181 PPKFAQPKRGDQPVPVEEDRKPGEQAAQVKEEKSEDTPNQNHSSSGSRSNQSM-QPPEKR 239
Query: 255 MK 250
MK
Sbjct: 240 MK 241
>tr|B3DLE4|B3DLE4_XENTR Mediator of RNA polymerase II transcription, subunit 6
homolog (Yeast) OS=Xenopus tropicalis GN=med6 PE=2 SV=1
Length = 246
Score = 108 bits (268), Expect = 2e-021
Identities = 67/160 (41%), Positives = 93/160 (58%), Gaps = 11/160 (6%)
Frame = -1
Query: 927 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEVLRRRSVHPLDHSQLSKM 754
++ GI + D WI L+ V DYF+ +PFYD TCNNEV++ + + LDH L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNNGTVLDYFSERSNPFYDRTCNNEVVKMQRL-TLDH--LNQM 63
Query: 753 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 574
G+EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGIEYILLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 573 YHISNAFSVAASKLETIKQV----DAKSQNEASETKPASE 466
+ I +AF A S K Q E +TKP ++
Sbjct: 124 HGIQSAFDEAMSYCRYHPSKGYWWHFKDQEERDKTKPKAK 163
>tr|B5FYR7|B5FYR7_TAEGU Putative mediator of RNA polymerase II transcription
subunit 6 homolog OS=Taeniopygia guttata PE=2 SV=1
Length = 245
Score = 106 bits (264), Expect = 5e-021
Identities = 66/160 (41%), Positives = 93/160 (58%), Gaps = 11/160 (6%)
Frame = -1
Query: 927 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEVLRRRSVHPLDHSQLSKM 754
++ GI + D WI L+ V DYF+ +PFYD TCNNEV++ + + LDH L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNNGSVLDYFSERSNPFYDRTCNNEVVKMQRM-TLDH--LNQM 63
Query: 753 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 574
G+EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGVEYILLHAQEPILFIIRKQQRQSPTQVMPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 573 YHISNAFSVAASKLETIKQV----DAKSQNEASETKPASE 466
+ I +AF A S K + E +TKP ++
Sbjct: 124 HGIQSAFEEAMSYCRYHPSKGYWWHFKDEEEREKTKPKAK 163
>tr|B4E2P0|B4E2P0_HUMAN cDNA FLJ59149, highly similar to RNA polymerase
transcriptional regulation mediator, subunit 6 homolog OS=Homo sapiens
PE=2 SV=1
Length = 181
Score = 104 bits (259), Expect = 2e-020
Identities = 60/132 (45%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Frame = -1
Query: 927 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEVLRRRSVHPLDHSQLSKM 754
++ GI + D WI L+ V DYF+ +PFYD TCNNEV++ + + L+H L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNSGSVLDYFSERSNPFYDRTCNNEVVKMQRL-TLEH--LNQM 63
Query: 753 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 574
G+EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGIEYILLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 573 YHISNAFSVAAS 538
+ I +AF A S
Sbjct: 124 HGIQSAFDEAMS 135
>tr|B0BNE1|B0BNE1_RAT Mediator complex subunit 6 OS=Rattus norvegicus GN=Med6
PE=2 SV=1
Length = 246
Score = 104 bits (259), Expect = 2e-020
Identities = 60/132 (45%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Frame = -1
Query: 927 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEVLRRRSVHPLDHSQLSKM 754
++ GI + D WI L+ V DYF+ +PFYD TCNNEV++ + + L+H L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNSGSVLDYFSERSNPFYDRTCNNEVVKMQRL-TLEH--LNQM 63
Query: 753 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 574
G+EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGIEYILLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 573 YHISNAFSVAAS 538
+ I +AF A S
Sbjct: 124 HGIQSAFDEAMS 135
>tr|C1C411|C1C411_RANCA Mediator of RNA polymerase II transcription subunit 6
OS=Rana catesbeiana GN=MED6 PE=2 SV=1
Length = 246
Score = 104 bits (258), Expect = 2e-020
Identities = 61/133 (45%), Positives = 85/133 (63%), Gaps = 9/133 (6%)
Frame = -1
Query: 927 DMTGICFRDQLWINSYPLDRNY-VFDYFA--LSPFYDITCNNEVLRRRSVHPLDHSQLSK 757
++ GI + D WI P+ N V DYF+ +PFYD TCNNEV++ + + LDH L++
Sbjct: 9 NLLGISWVDSAWI---PILNNVTVLDYFSERSNPFYDRTCNNEVVKMQRL-TLDH--LNQ 62
Query: 756 MTGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRA 577
MTG+EY++ A EP LF+ RKQ+R P + P+ YYI+ G IYQAP L SV +R+ A
Sbjct: 63 MTGVEYILLHAQEPILFIIRKQQRQTPTQAIPLADYYIIAGVIYQAPDLGSVINSRLLTA 122
Query: 576 VYHISNAFSVAAS 538
V+ I +AF A S
Sbjct: 123 VHGIQSAFDEAMS 135
>tr|B3S0T2|B3S0T2_TRIAD Putative uncharacterized protein (Fragment)
OS=Trichoplax adhaerens GN=TRIADDRAFT_16220 PE=4 SV=1
Length = 185
Score = 104 bits (257), Expect = 3e-020
Identities = 54/126 (42%), Positives = 80/126 (63%), Gaps = 7/126 (5%)
Frame = -1
Query: 909 FRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEVLRRRSVHPLDHSQLSKMTGLEYV 736
++D WI + D V DYF+ +PFYD TCNNEV++ + L+ S+L +TG+EY
Sbjct: 5 WQDSNWIPNLTPDN--VLDYFSQRSNPFYDRTCNNEVIK---MQRLEASRLKSLTGIEYD 59
Query: 735 ISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAVYHISNA 556
+ +P L++ RKQ R P +VTP+ YY+L G +YQAP L SV +R+ A+YHI +A
Sbjct: 60 LIHVQDPILYIIRKQHRHSPTEVTPLAEYYVLAGVVYQAPDLASVLNSRLLSALYHIQSA 119
Query: 555 FSVAAS 538
++ A S
Sbjct: 120 YNEAMS 125
>tr|D2HVR5|D2HVR5_AILME Putative uncharacterized protein (Fragment)
OS=Ailuropoda melanoleuca GN=PANDA_016487 PE=4 SV=1
Length = 239
Score = 103 bits (256), Expect = 4e-020
Identities = 60/129 (46%), Positives = 82/129 (63%), Gaps = 7/129 (5%)
Frame = -1
Query: 918 GICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEVLRRRSVHPLDHSQLSKMTGL 745
GI + D WI L+ V DYF+ +PFYD TCNNEV++ + + L+H L++M G+
Sbjct: 5 GISWVDSSWIPI--LNSGSVLDYFSERSNPFYDRTCNNEVVKMQRL-TLEH--LNQMVGV 59
Query: 744 EYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAVYHI 565
EY++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV+ I
Sbjct: 60 EYILLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGI 119
Query: 564 SNAFSVAAS 538
+AF A S
Sbjct: 120 QSAFDEAMS 128
>tr|A8K3N2|A8K3N2_HUMAN cDNA FLJ76264, highly similar to Homo sapiens mediator
of RNA polymerase II transcription, subunit 6 homolog (yeast) (MED6),
mRNA OS=Homo sapiens PE=2 SV=1
Length = 246
Score = 103 bits (255), Expect = 5e-020
Identities = 59/132 (44%), Positives = 84/132 (63%), Gaps = 7/132 (5%)
Frame = -1
Query: 927 DMTGICFRDQLWINSYPLDRNYVFDYFA--LSPFYDITCNNEVLRRRSVHPLDHSQLSKM 754
++ GI + D WI L+ V DYF+ +PFYD TCNNEV++ + + L+H L++M
Sbjct: 9 NLLGISWVDSSWIPI--LNSGSVLDYFSERSNPFYDRTCNNEVVKMQRL-TLEH--LNQM 63
Query: 753 TGLEYVISDATEPNLFVFRKQKRDGPEKVTPMLTYYILDGTIYQAPQLCSVFAARVGRAV 574
G++Y++ A EP LF+ RKQ+R P +V P+ YYI+ G IYQAP L SV +RV AV
Sbjct: 64 VGIKYILLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAV 123
Query: 573 YHISNAFSVAAS 538
+ I +AF A S
Sbjct: 124 HGIQSAFDEAMS 135
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 435,639,551,253
Number of Sequences: 11397958
Number of Extensions: 435639551253
Number of Successful Extensions: 176528260
Number of sequences better than 0.0: 0
|
