BLASTX 7.6.2
Query= UN05857 /QuerySize=1051
(1050 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O26779|ECX1_METTH Probable exosome complex exonuclease 1 OS=M... 126 3e-028
sp|Q97BZ5|ECX1_THEVO Probable exosome complex exonuclease 1 OS=T... 122 5e-027
sp|A3MUP1|ECX1_PYRCJ Probable exosome complex exonuclease 1 OS=P... 120 2e-026
sp|A9A5C9|ECX1_NITMS Probable exosome complex exonuclease 1 OS=N... 119 4e-026
sp|Q8U0L9|ECX1_PYRFU Probable exosome complex exonuclease 1 OS=P... 119 5e-026
sp|O59223|ECX1_PYRHO Probable exosome complex exonuclease 1 OS=P... 118 9e-026
sp|Q9V119|ECX1_PYRAB Probable exosome complex exonuclease 1 OS=P... 117 1e-025
sp|Q5JIR6|ECX1_PYRKO Probable exosome complex exonuclease 1 OS=P... 117 2e-025
sp|B6YSI2|ECX1_THEON Probable exosome complex exonuclease 1 OS=T... 117 2e-025
sp|A0RXU1|ECX1_CENSY Probable exosome complex exonuclease 1 OS=C... 117 2e-025
sp|Q9HIP2|ECX1_THEAC Probable exosome complex exonuclease 1 OS=T... 117 2e-025
sp|Q8TYC1|ECX1_METKA Probable exosome complex exonuclease 1 OS=M... 116 4e-025
sp|Q8ZVM9|ECX1_PYRAE Probable exosome complex exonuclease 1 OS=P... 115 6e-025
sp|Q4JB27|ECX1_SULAC Probable exosome complex exonuclease 1 OS=S... 115 6e-025
sp|C5A2B9|ECX1_THEGJ Probable exosome complex exonuclease 1 OS=T... 115 8e-025
sp|B1Y978|ECX1_THENV Probable exosome complex exonuclease 1 OS=T... 115 8e-025
sp|Q6P0I8|EXOS6_DANRE Exosome complex exonuclease MTR3 OS=Danio ... 114 1e-024
sp|A1RST0|ECX1_PYRIL Probable exosome complex exonuclease 1 OS=P... 112 4e-024
sp|A2BKC0|ECX1_HYPBU Probable exosome complex exonuclease 1 OS=H... 112 7e-024
sp|Q9YC03|ECX1_AERPE Probable exosome complex exonuclease 1 OS=A... 111 1e-023
>sp|O26779|ECX1_METTH Probable exosome complex exonuclease 1 OS=Methanobacterium
thermoautotrophicum GN=MTH_683 PE=1 SV=1
Length = 240
Score = 126 bits (316), Expect = 3e-028
Identities = 70/220 (31%), Positives = 116/220 (52%), Gaps = 3/220 (1%)
Frame = +3
Query: 195 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRESK-KATSYSDVGRLD 371
R DGR F + RP ++ G + A GS+Y EFG K++V+V+GPRE++ + D +
Sbjct: 17 REDGRAFDELRPLKIEAGILERADGSSYLEFGGNKILVAVYGPREAQIRKLQRPDRAVIR 76
Query: 372 CNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSD 545
C + F+ G D + E S + +AL +++E FP++ +DVF VLE+ G
Sbjct: 77 CRYNMAPFSVEERKRPGPDRRSVEISKITAEALRPALILEKFPRSVIDVFIEVLEAEGGT 136
Query: 546 LPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRG 725
I+ A +ALADAGI M D++ A + +G +++D EE+ + +P
Sbjct: 137 RCAGITAASVALADAGIPMRDMVVACAAGKVGDQVVLDLSEEEDKEGQADVPVAILPRTR 196
Query: 726 EITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
EIT L G T A+ L V+ C ++ E+ ++ L++
Sbjct: 197 EITLLQSDGNLTPEEFERALDLAVEGCLRIHEVQKEALRK 236
>sp|Q97BZ5|ECX1_THEVO Probable exosome complex exonuclease 1 OS=Thermoplasma
volcanium (strain ATCC 51530 / DSM 4299 / IFO 15438 / JCM 9571 / GSS1)
GN=TV0310 PE=3 SV=1
Length = 248
Score = 122 bits (305), Expect = 5e-027
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 3/235 (1%)
Frame = +3
Query: 144 MARTRPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGP 323
M +T K + D R DGR F++ RP ++ G ++ A GSAY E+G K+IV V+GP
Sbjct: 1 MIKTETSKIKLINEDNLRLDGRSFNELRPIKIEAGVLNRADGSAYIEWGGNKIIVGVYGP 60
Query: 324 RES-KKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFP 494
+E+ K + D + + F+ G D + E S ++ +AL IM+E FP
Sbjct: 61 KEAYPKHSQDIDHAVVKARYNMAAFSVDERKRPGPDRRTMEISKVISEALSSSIMIEQFP 120
Query: 495 KTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEE 674
+ +DV+ VL++ ++ A +ALADAGI M D++ + + +++D EE
Sbjct: 121 RAEIDVYIEVLQADAGTRIAGLTAATVALADAGIPMRDMVVGCTAGKVDGHIVLDLSKEE 180
Query: 675 EGCEDGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCL 839
+ + M MP GEI L + G+ T EA + ++A K+ +I R+ L
Sbjct: 181 DNFGEADIPMAIMPKTGEIVLLQMDGDVTEDEFYEATSMIIEATKKISQIQRNAL 235
>sp|A3MUP1|ECX1_PYRCJ Probable exosome complex exonuclease 1 OS=Pyrobaculum
calidifontis (strain JCM 11548 / VA1) GN=Pcal_0933 PE=3 SV=1
Length = 246
Score = 120 bits (300), Expect = 2e-026
Identities = 76/231 (32%), Positives = 115/231 (49%), Gaps = 4/231 (1%)
Frame = +3
Query: 195 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVGRLD 371
R DGR Q R +Q G VS A GSA +G T + +V+GPRE + S D G +
Sbjct: 14 RADGRAPDQMREVQIQVGTVSNADGSAVVSYGATTAVAAVYGPREMHPRHLSLPDRGVMR 73
Query: 372 CNVSYTNFASPTLGSQGTDHK---EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGS 542
F++ T + E S +L +ALE +M+E +P++ +DVF +L++ GS
Sbjct: 74 VRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLEQYPRSRIDVFIEILQADGS 133
Query: 543 DLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSR 722
++ A LALADAGI M DL+ VSV + ++++D E+ +G + MP+
Sbjct: 134 TRVASLTAASLALADAGIYMRDLVVGVSVGLVDGTVVLDLNGLEDNYGEGDMPVGYMPNL 193
Query: 723 GEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQAASASDE*TY 875
T L + G WT EA+ L V + ++ R+ LK A E Y
Sbjct: 194 RRFTLLQLDGAWTREKFLEALGLAVKGAEYVYQVAREALKNKYMAIAEEIY 244
>sp|A9A5C9|ECX1_NITMS Probable exosome complex exonuclease 1 OS=Nitrosopumilus
maritimus (strain SCM1) GN=Nmar_0432 PE=3 SV=1
Length = 244
Score = 119 bits (297), Expect = 4e-026
Identities = 71/223 (31%), Positives = 117/223 (52%), Gaps = 3/223 (1%)
Frame = +3
Query: 180 DLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSD 356
D + R DGR + R +++ G + A GS+Y EFG+ K++V VFGPR+ K S +D
Sbjct: 12 DENGKRCDGRTVDEPRRIMIKAGGLKNADGSSYIEFGDNKILVGVFGPRDVHPKHMSDTD 71
Query: 357 VGRLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLE 530
G L F+ + + E S ++ +ALE +M+E FP+T VDVF VL+
Sbjct: 72 TGILRVRYHMEPFSVGERKNPAPSRREIEISKVIKEALEPAVMLEKFPRTAVDVFIEVLQ 131
Query: 531 SGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTC 710
+ G ++ A +ALADAGI M D++ A++ + ++++D EE+ +
Sbjct: 132 ADGGTRCAALTAASVALADAGIPMRDMVAAIAAGKVADTVILDVNNEEDQAGQADMPIGY 191
Query: 711 MPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCL 839
MP+ +IT L + G T + +Q+ VD C + E+ + L
Sbjct: 192 MPNLEKITLLQLDGVLTPEEYKKCIQVGVDGCKLVYELQKKAL 234
>sp|Q8U0L9|ECX1_PYRFU Probable exosome complex exonuclease 1 OS=Pyrococcus
furiosus GN=PF1568 PE=3 SV=1
Length = 250
Score = 119 bits (296), Expect = 5e-026
Identities = 76/233 (32%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
Frame = +3
Query: 156 RPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-S 332
+P K D + R DGR ++ RP ++ G + A+GSAY E+G K+I +V+GPRE
Sbjct: 4 KPEGLKLIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREIH 63
Query: 333 KKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTV 506
K D L + F+ G D + E S ++ ALE +++E FP+T +
Sbjct: 64 PKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIRGALEPALILEMFPRTAI 123
Query: 507 DVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE 686
DVF VL++ I+ A LALADAGI M DL+ A S I +++D EE+
Sbjct: 124 DVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACSAGKIEGEIVLDLNKEEDNYG 183
Query: 687 DGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
+ + MP + +IT L + G T EA++L + + + R+ LK+
Sbjct: 184 EADVPVAIMPIKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKE 236
>sp|O59223|ECX1_PYRHO Probable exosome complex exonuclease 1 OS=Pyrococcus
horikoshii GN=PH1549 PE=3 SV=1
Length = 249
Score = 118 bits (294), Expect = 9e-026
Identities = 75/233 (32%), Positives = 119/233 (51%), Gaps = 3/233 (1%)
Frame = +3
Query: 156 RPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-S 332
+P K D + R DGR ++ RP ++ G + A+GSAY E+G K+I +V+GPRE
Sbjct: 4 KPEGLKLIDENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPRELH 63
Query: 333 KKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTV 506
K D L + F+ G D + E S ++ ALE +++E FP+T++
Sbjct: 64 SKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTSI 123
Query: 507 DVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE 686
DVF VL++ I+ A LALADAGI M DL+ A + I +++D EE+
Sbjct: 124 DVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYG 183
Query: 687 DGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
+ + MP + +IT L + G T EA++L + + + R+ LK+
Sbjct: 184 EADVPVAIMPLKNDITLLQMDGYLTKEEFIEAVRLAIKGAKAVYQKQREALKE 236
>sp|Q9V119|ECX1_PYRAB Probable exosome complex exonuclease 1 OS=Pyrococcus
abyssi GN=PYRAB06100 PE=1 SV=1
Length = 249
Score = 117 bits (293), Expect = 1e-025
Identities = 75/233 (32%), Positives = 118/233 (50%), Gaps = 3/233 (1%)
Frame = +3
Query: 156 RPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-S 332
+P K D + R DGR ++ RP ++ G + A+GSAY E+G K+I +V+GPRE
Sbjct: 4 KPEGLKLIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPRELH 63
Query: 333 KKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTV 506
K D L + F+ G D + E S ++ ALE +++E FP+T +
Sbjct: 64 PKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSIEISKVIKGALEPALILEMFPRTAI 123
Query: 507 DVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE 686
DVF VL++ I+ A LALADAGI M DL+ A + I +++D EE+
Sbjct: 124 DVFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYG 183
Query: 687 DGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
+ + MP + +IT L + G T EA++L + + + R+ LK+
Sbjct: 184 EADVPVAIMPLKNDITLLQMDGYLTKDEFIEAVKLAIKGAKAVYQKQREALKE 236
>sp|Q5JIR6|ECX1_PYRKO Probable exosome complex exonuclease 1 OS=Pyrococcus
kodakaraensis GN=TK1634 PE=3 SV=1
Length = 249
Score = 117 bits (292), Expect = 2e-025
Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 3/233 (1%)
Frame = +3
Query: 156 RPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-S 332
RP K D + R DGR ++ RP ++ G + A GSAY E+G KV+ +V+GPRE
Sbjct: 4 RPEGLKLIDENGKRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIH 63
Query: 333 KKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTV 506
K D L + F+ G D + E S ++ ALE +++ FP+T +
Sbjct: 64 PKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALLLHMFPRTAI 123
Query: 507 DVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE 686
DVF +L++ I+ A LALADAGI M DL+ A + I +++D EE+
Sbjct: 124 DVFIEILQADAGTRVAGITAASLALADAGIPMKDLVAACAAGKIDGEIVLDLNKEEDNYG 183
Query: 687 DGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
+ + MP + +IT L + G T EA++L + + + R+ LK+
Sbjct: 184 EADVPVAIMPLKNDITLLQMDGYLTKDEFLEAVRLAIKGAKAVYQKQREALKE 236
>sp|B6YSI2|ECX1_THEON Probable exosome complex exonuclease 1 OS=Thermococcus
onnurineus (strain NA1) GN=TON_0030 PE=3 SV=1
Length = 249
Score = 117 bits (292), Expect = 2e-025
Identities = 73/233 (31%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
Frame = +3
Query: 156 RPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-S 332
+P K D + R DGR ++ RP ++ G + A GSAY E+G K++ +V+GPRE
Sbjct: 4 KPEDLKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKILAAVYGPREIH 63
Query: 333 KKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTV 506
K D L + F+ G D + E S ++ ALE +++E FP+T +
Sbjct: 64 PKHLQRPDRAILRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPRTAI 123
Query: 507 DVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE 686
D+F VL++ I+ A LALADAGI M DL+ A + I +++D EE+
Sbjct: 124 DIFIEVLQADAGTRVAGITAASLALADAGIPMRDLVAACAAGKIEGEIVLDLNKEEDNYG 183
Query: 687 DGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
+ + MP + +IT L + G T EA++L + + + R+ LK+
Sbjct: 184 EADVPVAIMPLKNDITLLQMDGYLTRDEFIEAVRLAIKGAKAVYQKQREALKE 236
>sp|A0RXU1|ECX1_CENSY Probable exosome complex exonuclease 1 OS=Cenarchaeum
symbiosum GN=CENSYa_1536 PE=3 SV=1
Length = 243
Score = 117 bits (291), Expect = 2e-025
Identities = 65/223 (29%), Positives = 115/223 (51%), Gaps = 3/223 (1%)
Frame = +3
Query: 180 DLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSD 356
D + R DGR + R + G ++ A+GSAY EFG+ K++ +FGPR+ K ++
Sbjct: 12 DENGIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPRDVHPKHMVRTE 71
Query: 357 VGRLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLE 530
G L C + F+ + E S ++ +ALE +M+E FP+T VDVF VL+
Sbjct: 72 TGILRCRYHMSPFSVSERKKPAPSRREIEISKVIKEALEPSLMLEQFPRTAVDVFIEVLQ 131
Query: 531 SGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTC 710
+ G ++ A +ALADAGI M D+++A + + ++++D EE+ +
Sbjct: 132 ADGGSRCAALAAASVALADAGIPMRDMVSACAAGKVADTIVLDVNNEEDQAGQADMPVGY 191
Query: 711 MPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCL 839
MP+ ++T + + G T + + +D C ++ E+ + L
Sbjct: 192 MPNLDQVTLIQLDGVLTPDEYSRCAAMAIDGCKQVYEVQKKAL 234
>sp|Q9HIP2|ECX1_THEAC Probable exosome complex exonuclease 1 OS=Thermoplasma
acidophilum GN=Ta1293 PE=3 SV=1
Length = 248
Score = 117 bits (291), Expect = 2e-025
Identities = 65/221 (29%), Positives = 116/221 (52%), Gaps = 3/221 (1%)
Frame = +3
Query: 186 DWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRES-KKATSYSDVG 362
D R DGR F++ RP +Q G ++ A GSAY E+G K++V V+GP+E+ K + D
Sbjct: 15 DNLRLDGRSFNELRPIKIQAGVLNRADGSAYIEWGGNKIMVGVYGPKEAYPKHSQDIDHA 74
Query: 363 RLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLESG 536
+ + F+ G D + E S ++ +AL IM+E FP+ +DV+ VL++
Sbjct: 75 IVKARYNMAAFSVDERKRPGPDRRTMEISKVISEALSSSIMIEQFPRAEIDVYIEVLQAD 134
Query: 537 GSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMP 716
++ A +ALADAG+ M D++ + + +++D EE+ + + MP
Sbjct: 135 AGTRIAGLTAATVALADAGVPMRDMVVGCTAGKVDGHMVLDLSKEEDNYGEADIPIAIMP 194
Query: 717 SRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCL 839
G+I + + G+ T + +AM + +A ++ +I R+ L
Sbjct: 195 KTGDIVLMQMDGDVTEDELYQAMDMIFEATKRISQIQREAL 235
>sp|Q8TYC1|ECX1_METKA Probable exosome complex exonuclease 1 OS=Methanopyrus
kandleri GN=MK0381 PE=3 SV=1
Length = 239
Score = 116 bits (289), Expect = 4e-025
Identities = 71/223 (31%), Positives = 111/223 (49%), Gaps = 3/223 (1%)
Frame = +3
Query: 186 DWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVG 362
D R DGR + RP +Q G + A GSAY E G K++ +V+GPRE + D
Sbjct: 12 DGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVYGPRELHPRHKQKPDRA 71
Query: 363 RLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLESG 536
+ + F+ G D + E S + +ALE I E +P+T +D+F VL++
Sbjct: 72 VVRFRYNMAPFSVDERKRPGPDRRSIEISKLSKEALEPAIFTEYYPRTAIDIFVEVLQAD 131
Query: 537 GSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMP 716
IS A +ALADAGI M DL+ A + + +++DP+ E+G + + MP
Sbjct: 132 AGTRCAGISAASVALADAGIEMRDLVAACAAGKVEGKVVLDPMYYEDGYGEADVPLAMMP 191
Query: 717 SRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
G+IT L + G+ T +A++L C + + R LK+
Sbjct: 192 KEGKITLLQMDGDMTPGEFKQAVKLAKKGCKIVYKEQRRALKE 234
>sp|Q8ZVM9|ECX1_PYRAE Probable exosome complex exonuclease 1 OS=Pyrobaculum
aerophilum GN=PAE2207 PE=3 SV=1
Length = 246
Score = 115 bits (287), Expect = 6e-025
Identities = 73/220 (33%), Positives = 111/220 (50%), Gaps = 4/220 (1%)
Frame = +3
Query: 195 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVGRLD 371
R DGR Q R + G VS A GSA +G T + +V+GPRE + S D G +
Sbjct: 14 RADGRTPDQMREVKIAVGVVSNADGSAMVSYGATTAVAAVYGPREMHPRHLSLPDRGVMR 73
Query: 372 CNVSYTNFASPTLGSQGTDHK---EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGS 542
F++ T + E S +L +ALE I++E +P++ +DVF +L++ GS
Sbjct: 74 VRYHMAPFSTKDERKSPTPSRREIEISKILREALEPAIVLEQYPRSRIDVFVEILQADGS 133
Query: 543 DLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSR 722
++ A LALADAGI M DL+ VSV + ++++D E+ +G + MP+
Sbjct: 134 TRVASLTAASLALADAGIYMRDLVVGVSVGLVDGTVVLDLNGLEDQYGEGDLPLGYMPNL 193
Query: 723 GEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLK 842
T L + G WT +A+ L V + +I RD LK
Sbjct: 194 KRFTLLQLDGAWTRDMFLQALNLAVRGAEYVYQIARDALK 233
>sp|Q4JB27|ECX1_SULAC Probable exosome complex exonuclease 1 OS=Sulfolobus
acidocaldarius GN=Saci_0610 PE=3 SV=1
Length = 243
Score = 115 bits (287), Expect = 6e-025
Identities = 69/219 (31%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Frame = +3
Query: 195 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVGRLD 371
R DGR + RP ++ G + A GSA E GNTKVI +V+GP+E + + D L
Sbjct: 16 RTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGPKEMHPRHLALPDKASLR 75
Query: 372 CNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSD 545
T F++ + + E S ++ +ALE I++ FP+T +D+F VL++
Sbjct: 76 VRYHMTPFSTDERKNPAPSRREIELSKVIREALESTILLNLFPRTVIDIFMEVLQADAGT 135
Query: 546 LPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRG 725
V + A +ALADAGI M DLI V+V SL++D +E+ + + +PS G
Sbjct: 136 RLVALMAASMALADAGIPMRDLIAGVAVGKADGSLVLDLNEQEDMWGEADMPIAVLPSLG 195
Query: 726 EITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLK 842
++ L + G T A +L S + + ++ LK
Sbjct: 196 QVVLLQLNGFMTPDEFRRAFELAQKGISSIYALQKEALK 234
>sp|C5A2B9|ECX1_THEGJ Probable exosome complex exonuclease 1 OS=Thermococcus
gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=TGAM_2036 PE=3
SV=1
Length = 249
Score = 115 bits (286), Expect = 8e-025
Identities = 73/233 (31%), Positives = 116/233 (49%), Gaps = 3/233 (1%)
Frame = +3
Query: 156 RPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-S 332
RP K D + R DGR ++ R ++ G + A GSAY E+G K++ +V+GPRE
Sbjct: 4 RPEGLKLIDENGRRIDGRRKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIH 63
Query: 333 KKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTV 506
K D L + F+ G D + E S ++ ALE +++E FP+T V
Sbjct: 64 PKHLQRPDTAVLRVRYNMAPFSVEERKKPGPDRRSVEISKVIRGALEPALILEMFPRTVV 123
Query: 507 DVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCE 686
DVF VL++ I+ A LALADAG+ M DL+ A + I +++D +E+
Sbjct: 124 DVFIEVLQADAGTRVAGITAASLALADAGVPMRDLVAACAAGKIDGEIVLDLNKDEDNYG 183
Query: 687 DGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
+ + MP + +IT L + G T EA++L + + + R+ LK+
Sbjct: 184 EADVPVAIMPLKNDITLLQMDGYLTKEEFIEAVKLAIKGAKAVYQKQREALKE 236
>sp|B1Y978|ECX1_THENV Probable exosome complex exonuclease 1 OS=Thermoproteus
neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=Tneu_1381 PE=3
SV=1
Length = 246
Score = 115 bits (286), Expect = 8e-025
Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 8/248 (3%)
Frame = +3
Query: 144 MARTRPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGP 323
M + P+ +G R DGR Q R + G +S A GSA +G T + +V+GP
Sbjct: 1 MKKPPVPLLQGG----VRADGRAPDQMREVQISVGVISNADGSAMVSYGATTAVAAVYGP 56
Query: 324 RE-SKKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHK---EYSSMLHKALEGVIMMETF 491
RE + S D G + F++ T + E S +L +ALE +M+E +
Sbjct: 57 REMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPSRREIEISKVLREALEPAVMLEQY 116
Query: 492 PKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTE 671
P++ +DVF +L++ GS ++ A LALADAGI M DL+ VSV + ++++D
Sbjct: 117 PRSRIDVFIEILQADGSTRVASLTAASLALADAGIYMRDLVIGVSVGLVDGTVVLDLNGL 176
Query: 672 EEGCEDGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQAA 851
E+ +G + MP+ T L + G W + EA+ L V + + RD LK
Sbjct: 177 EDQYGEGDLPVGYMPNLRRYTLLQLDGAWGRDKLLEALNLAVKGAEFVYQKARDALKNRY 236
Query: 852 SASDE*TY 875
A E Y
Sbjct: 237 MAIAEEIY 244
>sp|Q6P0I8|EXOS6_DANRE Exosome complex exonuclease MTR3 OS=Danio rerio GN=exosc6
PE=2 SV=2
Length = 271
Score = 114 bits (284), Expect = 1e-024
Identities = 73/219 (33%), Positives = 118/219 (53%), Gaps = 9/219 (4%)
Frame = +3
Query: 192 TRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRESKKATSYS-DVGRL 368
+R RG RP + G VS A GSAY E GNTK+I SV+GP+E+++ GRL
Sbjct: 32 SRQGVRGNGDVRPVFARCGLVSQAKGSAYIEAGNTKIICSVYGPKETERRDETDMKTGRL 91
Query: 369 DCNVSYTNFASPTLGS--QGTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGS 542
C+ F+ G+ QG++ ++ S+ L ++L + + +P++ +DV +VLE+ GS
Sbjct: 92 VCDFRLAPFSCVKRGAWIQGSEERDLSATLMESLRPGVCLHRYPRSQIDVNVMVLENDGS 151
Query: 543 DLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSR 722
L ++CA +ALADAGI MYD++ ++ G + ++DP EE C GS+ ++
Sbjct: 152 VLAHAVTCASMALADAGIEMYDIVLGCTLRQSGNACLVDPSYAEE-C--GSWQEGYGDNQ 208
Query: 723 GEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCL 839
G +T + +N ++ D L E MR C+
Sbjct: 209 GCVTLALLPNLNQVSGLNADGEMREDT---LTEAMRTCM 244
>sp|A1RST0|ECX1_PYRIL Probable exosome complex exonuclease 1 OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=Pisl_0836 PE=3 SV=1
Length = 246
Score = 112 bits (280), Expect = 4e-024
Identities = 73/237 (30%), Positives = 116/237 (48%), Gaps = 8/237 (3%)
Frame = +3
Query: 144 MARTRPPIFKGSDLDWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGP 323
M + P+F+ R DGR Q R + G VS A GSA +G T + +V+GP
Sbjct: 1 MKKPPVPLFQNG----VRADGRAPDQMREVNITVGIVSNADGSAMVSYGATTAVAAVYGP 56
Query: 324 RE-SKKATSYSDVGRLDCNVSYTNFASPTLGSQGTDHK---EYSSMLHKALEGVIMMETF 491
RE + S D G + F++ T + E S +L +ALE +++E +
Sbjct: 57 REMHPRHLSLPDRGVMRVRYHMAPFSTKDERKSPTPTRREIEISKILREALEPAVVLEQY 116
Query: 492 PKTTVDVFALVLESGGSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTE 671
P++ +DVF +L++ GS ++ A LALADAG+ M DL+ VSV + ++++D
Sbjct: 117 PRSRIDVFIEILQADGSTRVASLTAASLALADAGVYMRDLVIGVSVGLVDGAVVLDLNGL 176
Query: 672 EEGCEDGSFMMTCMPSRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLK 842
E+ +G + MP+ T L + G WT EA+ L + + + RD LK
Sbjct: 177 EDQYGEGDLPVGYMPNLKRFTLLQLDGAWTRDKFLEALNLAIKGAEFVYQKARDALK 233
>sp|A2BKC0|ECX1_HYPBU Probable exosome complex exonuclease 1 OS=Hyperthermus
butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0571 PE=3 SV=1
Length = 255
Score = 112 bits (278), Expect = 7e-024
Identities = 67/220 (30%), Positives = 113/220 (51%), Gaps = 3/220 (1%)
Frame = +3
Query: 195 RPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRES-KKATSYSDVGRLD 371
R DGR Q RP ++ G +S A GSA E+G T+VI +V+GPRE+ + + D +
Sbjct: 25 RHDGRLPEQLRPIRMEVGVLSNADGSALVEYGGTRVIAAVYGPREAHPRHVALPDRAIIR 84
Query: 372 CNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLESGGSD 545
C F++ + + E S ++ +ALE V++ E +P+T +DV+ VL+S G
Sbjct: 85 CRYHMAPFSTAERKTPAPTRREVELSKVIREALEAVVISELYPRTAIDVYMEVLQSDGGT 144
Query: 546 LPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMPSRG 725
I+ A LALADAGI M DL+ V+V + L++D E+ + + PS
Sbjct: 145 RTAAITAASLALADAGIAMRDLVAGVAVGKVDGVLVLDIDEIEDNYAEADMPVAMAPSLD 204
Query: 726 EITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQ 845
++ L + G T +A++L + + ++ L++
Sbjct: 205 KVLLLQLNGVLTHDEFVKALELARKGIQVIYNLQKEALRK 244
>sp|Q9YC03|ECX1_AERPE Probable exosome complex exonuclease 1 OS=Aeropyrum pernix
GN=APE_1447 PE=3 SV=1
Length = 246
Score = 111 bits (276), Expect = 1e-023
Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 3/224 (1%)
Frame = +3
Query: 186 DWTRPDGRGFHQCRPALLQTGAVSAASGSAYAEFGNTKVIVSVFGPRE-SKKATSYSDVG 362
D R DGR RP +Q G + A GSA EFG T+V+ +V+GPRE ++ D
Sbjct: 14 DGRRHDGRLPEDLRPVRMQVGILHNADGSALVEFGRTRVLAAVYGPREPHQRFYVLPDRA 73
Query: 363 RLDCNVSYTNFASPTLGSQGTDHK--EYSSMLHKALEGVIMMETFPKTTVDVFALVLESG 536
L F++ S + E S ++ +ALE V++ E FP+T +DVF VL++
Sbjct: 74 ALRVRYHMAPFSTDERKSPAPSRREIELSKVVREALEPVVLAEEFPRTVIDVFLEVLQAD 133
Query: 537 GSDLPVVISCAGLALADAGIMMYDLITAVSVSCIGKSLMIDPVTEEEGCEDGSFMMTCMP 716
G ++ A LALADAGI M L+ V+V I L++D E+ + + P
Sbjct: 134 GGTRTAAVTAASLALADAGIPMRALVGGVAVGKIQGVLVVDVDELEDMYGEADMPVAAAP 193
Query: 717 SRGEITQLTITGEWTTPNINEAMQLCVDACSKLGEIMRDCLKQA 848
GEIT L + G T A+ + + A ++ E+ ++ ++++
Sbjct: 194 DIGEITLLQLNGVLTGEEFRTALAMALRAIDRVVEMEKEAIRKS 237
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,142,333,523
Number of Sequences: 518415
Number of Extensions: 23142333523
Number of Successful Extensions: 167313942
Number of sequences better than 0.0: 0
|
